BLASTX nr result

ID: Cnidium21_contig00009124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009124
         (1346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN07899.1| 20S proteasome alpha 6 subunit [Nicotiana bentham...   412   e-112
ref|XP_002510414.1| proteasome subunit alpha type, putative [Ric...   410   e-112
ref|XP_004152689.1| PREDICTED: proteasome subunit alpha type-1-A...   410   e-112
gb|ABK92956.1| unknown [Populus trichocarpa] gi|118483175|gb|ABK...   407   e-111
ref|XP_002281948.1| PREDICTED: proteasome subunit alpha type-1-B...   407   e-111

>gb|AAN07899.1| 20S proteasome alpha 6 subunit [Nicotiana benthamiana]
          Length = 274

 Score =  412 bits (1059), Expect = e-112
 Identities = 211/276 (76%), Positives = 226/276 (81%)
 Frame = -1

Query: 1202 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKSNSELSSHQ 1023
            MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHV+LACVNK+NSELSSHQ
Sbjct: 1    MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVILACVNKANSELSSHQ 60

Query: 1022 KKIFKADDHIGVAIAGLTADGRVLSRYMRSECINYSYSYESPLPVGRLVVQLADKAQVCT 843
            KKIFK DDHIGVAIAGLTADGRVLSRYMR+ECINYSY+YESPLPVGRLVVQLADKAQVCT
Sbjct: 61   KKIFKVDDHIGVAIAGLTADGRVLSRYMRNECINYSYAYESPLPVGRLVVQLADKAQVCT 120

Query: 842  QRSWKRPYGVGLLVSGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYXXXXXXXXX 663
            QRSWKRPYGVGLLV GLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTY         
Sbjct: 121  QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFETFM 180

Query: 662  XXXXXXXXKDALFAIRETLQGERLTSSICTVAVLGVGEAFQILDHKTVQALIDAFEIXXX 483
                    KDALFA+RETLQGE+LTS+ CTVAV+GVGEAF +LD +T+QALI+ FEI   
Sbjct: 181  DSSRETLLKDALFALRETLQGEKLTSTNCTVAVVGVGEAFHMLDKETIQALINEFEIAGE 240

Query: 482  XXXXXXXXXXXXXXXESGPATDQGPPAQPDVAPMDI 375
                            + P  ++G PA    APMDI
Sbjct: 241  EAPAAAPDEAGSDEPAAAP--EEGAPADQGAAPMDI 274


>ref|XP_002510414.1| proteasome subunit alpha type, putative [Ricinus communis]
            gi|223551115|gb|EEF52601.1| proteasome subunit alpha
            type, putative [Ricinus communis]
          Length = 283

 Score =  410 bits (1054), Expect = e-112
 Identities = 217/283 (76%), Positives = 227/283 (80%), Gaps = 7/283 (2%)
 Frame = -1

Query: 1202 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKSNSELSSHQ 1023
            MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNK+NSELSSHQ
Sbjct: 1    MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 1022 KKIFKADDHIGVAIAGLTADGRVLSRYMRSECINYSYSYESPLPVGRLVVQLADKAQVCT 843
            KKIFK DDHIGVAIAGLTADGRVLSRYMRSECINYS++YESPLPVGRLVVQLADKAQVCT
Sbjct: 61   KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSFTYESPLPVGRLVVQLADKAQVCT 120

Query: 842  QRSWKRPYGVGLLVSGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYXXXXXXXXX 663
            QRSWKRPYGVGLLV+GLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTY         
Sbjct: 121  QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYMERRFENFM 180

Query: 662  XXXXXXXXKDALFAIRETLQGERLTSSICTVAVLGVGEAFQILDHKTVQALIDAFEI--- 492
                    KDAL A+RETLQGE L SSICTVAV+GVGEAF +LD +TVQ LIDAFEI   
Sbjct: 181  DSSRDDLIKDALIAVRETLQGETLKSSICTVAVVGVGEAFHVLDQETVQQLIDAFEIVGE 240

Query: 491  ---XXXXXXXXXXXXXXXXXXESGPATDQGPPAQPD-VAPMDI 375
                                 + G A DQG  A  + VAPMDI
Sbjct: 241  PEAPAAEPDAAAEGGGGAAADQGGAAADQGGAAADEGVAPMDI 283


>ref|XP_004152689.1| PREDICTED: proteasome subunit alpha type-1-A-like [Cucumis sativus]
          Length = 281

 Score =  410 bits (1053), Expect = e-112
 Identities = 216/281 (76%), Positives = 224/281 (79%), Gaps = 5/281 (1%)
 Frame = -1

Query: 1202 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKSNSELSSHQ 1023
            MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRS THVVLACVNK+NSELSSHQ
Sbjct: 1    MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNTHVVLACVNKANSELSSHQ 60

Query: 1022 KKIFKADDHIGVAIAGLTADGRVLSRYMRSECINYSYSYESPLPVGRLVVQLADKAQVCT 843
            KKIFK DDHIGVAI+GLTADGRVLSRYMRSECINYSY+YESPLPVGRLVVQLADKAQVCT
Sbjct: 61   KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 842  QRSWKRPYGVGLLVSGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYXXXXXXXXX 663
            QRSWKRPYGVGLLV GLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTY         
Sbjct: 121  QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 662  XXXXXXXXKDALFAIRETLQGERLTSSICTVAVLGVGEAFQILDHKTVQALIDAFEIXXX 483
                    KDAL A RETLQGE+LTSSICT+A+LGVGE F ILD +TVQ LID FEI   
Sbjct: 181  DSSRDELIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 482  XXXXXXXXXXXXXXXESG---PA--TDQGPPAQPDVAPMDI 375
                           +S    PA  TDQG      VAPMDI
Sbjct: 241  DDVPAVDQDIAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 281


>gb|ABK92956.1| unknown [Populus trichocarpa] gi|118483175|gb|ABK93492.1| unknown
            [Populus trichocarpa]
          Length = 274

 Score =  407 bits (1047), Expect = e-111
 Identities = 213/276 (77%), Positives = 223/276 (80%)
 Frame = -1

Query: 1202 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKSNSELSSHQ 1023
            MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNK+NSELSSHQ
Sbjct: 1    MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 1022 KKIFKADDHIGVAIAGLTADGRVLSRYMRSECINYSYSYESPLPVGRLVVQLADKAQVCT 843
            KKIFK DDHIGVAIAGLTADGRVLSRYMR+ECINYS++YESPLPVGRLVVQLADKAQVCT
Sbjct: 61   KKIFKVDDHIGVAIAGLTADGRVLSRYMRTECINYSFNYESPLPVGRLVVQLADKAQVCT 120

Query: 842  QRSWKRPYGVGLLVSGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYXXXXXXXXX 663
            QRSWKRPYGVGLLV G DESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTY         
Sbjct: 121  QRSWKRPYGVGLLVGGTDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFM 180

Query: 662  XXXXXXXXKDALFAIRETLQGERLTSSICTVAVLGVGEAFQILDHKTVQALIDAFEIXXX 483
                    KDAL A+RETLQGE L SSICTVAV+GV EAF ILD +TVQ LI+AFEI   
Sbjct: 181  DSSRDDLIKDALIAVRETLQGETLKSSICTVAVVGVDEAFHILDQETVQQLINAFEI--V 238

Query: 482  XXXXXXXXXXXXXXXESGPATDQGPPAQPDVAPMDI 375
                           E G A ++G  A  D APMDI
Sbjct: 239  GETEAGAAEEEAGAEEEGTAAEEGAAAHQDAAPMDI 274


>ref|XP_002281948.1| PREDICTED: proteasome subunit alpha type-1-B [Vitis vinifera]
          Length = 284

 Score =  407 bits (1047), Expect = e-111
 Identities = 214/284 (75%), Positives = 225/284 (79%), Gaps = 8/284 (2%)
 Frame = -1

Query: 1202 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKSNSELSSHQ 1023
            MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNK+NSELSSHQ
Sbjct: 1    MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 1022 KKIFKADDHIGVAIAGLTADGRVLSRYMRSECINYSYSYESPLPVGRLVVQLADKAQVCT 843
            KKIFK DDHIGVAIAGLTADGRVLSRYMRSECINYS++YESPLPVGRLVVQLADKAQVCT
Sbjct: 61   KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSFTYESPLPVGRLVVQLADKAQVCT 120

Query: 842  QRSWKRPYGVGLLVSGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYXXXXXXXXX 663
            QRSWKRPYGVGLLV+GLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTY         
Sbjct: 121  QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFGTFQ 180

Query: 662  XXXXXXXXKDALFAIRETLQGERLTSSICTVAVLGVGEAFQILDHKTVQALIDAFEI--- 492
                    KDALFAIRETLQGE+L SSICTV VLGVGE F ILD +TVQ LI+AFE+   
Sbjct: 181  NSSREDLIKDALFAIRETLQGEKLKSSICTVTVLGVGEPFHILDQETVQGLINAFEMAGE 240

Query: 491  -----XXXXXXXXXXXXXXXXXXESGPATDQGPPAQPDVAPMDI 375
                                   E G A ++G   +   APMDI
Sbjct: 241  EAPAADQGAAGEEGAAGEVVAAAEEGAAPEEGAATEEGAAPMDI 284


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