BLASTX nr result
ID: Cnidium21_contig00009118
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00009118
(1763 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_194274.2| zinc finger CCCH domain-containing protein 48 [... 436 e-119
ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ric... 433 e-119
ref|XP_002865885.1| hypothetical protein ARALYDRAFT_495266 [Arab... 433 e-119
ref|NP_200011.1| zinc finger CCCH domain-containing protein 63 [... 431 e-118
ref|XP_002318843.1| predicted protein [Populus trichocarpa] gi|2... 429 e-118
>ref|NP_194274.2| zinc finger CCCH domain-containing protein 48 [Arabidopsis thaliana]
gi|75334157|sp|Q9FNZ2.1|C3H48_ARATH RecName: Full=Zinc
finger CCCH domain-containing protein 48; Short=AtC3H48;
AltName: Full=Zinc finger CCCH domain and WD40
repeat-containing protein 1 gi|12057164|emb|CAC19847.1|
zfwd1 protein [Arabidopsis thaliana]
gi|109946599|gb|ABG48478.1| At4g25440 [Arabidopsis
thaliana] gi|332659660|gb|AEE85060.1| zinc finger CCCH
domain-containing protein 48 [Arabidopsis thaliana]
Length = 430
Score = 436 bits (1121), Expect = e-119
Identities = 217/430 (50%), Positives = 287/430 (66%), Gaps = 10/430 (2%)
Frame = -1
Query: 1391 KVGGSS------AKNGVCRFWMAGCCKRSDCRFLHPEVPAPGVKKSWKNPNYHVPKTSQI 1230
++GG S + VC W AG C R C +LH E+P PG + N V S
Sbjct: 15 RLGGGSNRPTTDSNQKVCFHWRAGRCNRYPCPYLHRELPGPGSGPVAASSNKRVADESGF 74
Query: 1229 SGVPRRQGSEFEVKSAKKPCNVTQSAQTSETKDVMKRQNKEPKKQLCKYWVTGNCVYGDQ 1050
+G R+G F + + + V K + +LCK+WV GNC YGD+
Sbjct: 75 AGPSHRRGPGFSGTA-------NNWGRFGGNRTVTKTE------KLCKFWVDGNCPYGDK 121
Query: 1049 CKNLHSWYYGDGFTMLAKLKGHTKAVTGIALPPGSDKLYSVSKDNSMRVWNCHTGQCGEV 870
C+ LH W GD F++L +L GH K VTGIALP GSDKLY+ SKD ++R+W+C +GQC V
Sbjct: 122 CRYLHCWSKGDSFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGV 181
Query: 869 VNFDDECGSLMSEGPCIFVGLQNAIKAWNLEFQAEITLNGPVVGQVYAMEVGNNMFFAAT 690
+N E G ++SEGP + VG+ N +KAWN++ A+++LNGPV GQVY++ VG ++ FA T
Sbjct: 182 LNLGGEVGCIISEGPWLLVGMPNLVKAWNIQNNADLSLNGPV-GQVYSLVVGTDLLFAGT 240
Query: 689 QDGNISVWK----TCSSEVAATLRGHTGAVVSLVVGANRLYSGSMDKTIKVWDLETLKCL 522
QDG+I VW+ T + AA+L GHT AVVSL VGANRLYSG+MD +IKVW L+ L+C+
Sbjct: 241 QDGSILVWRYNSTTSCFDPAASLLGHTLAVVSLYVGANRLYSGAMDNSIKVWSLDNLQCI 300
Query: 521 QTLHGHSEVVMSVLCWDSFLLSGSLDGQIKVWAATESGNLEVVNECDEGHGILGFCGITD 342
QTL H+ VVMS++CWD FLLS SLD +K+WAATE GNLEV E +G+L CG+ D
Sbjct: 301 QTLTEHTSVVMSLICWDQFLLSCSLDNTVKIWAATEGGNLEVTYTHKEEYGVLALCGVHD 360
Query: 341 AEAKPILLCSCNDNSVRLYELPSFNERGRIYAKAEVRTLQIGTGGLFFTGDAMGQLTVWK 162
AEAKP+LLCSCNDNS+ LY+LPSF ERG+I AK E+R++QIG GG+FFTGD GQ+ VWK
Sbjct: 361 AEAKPVLLCSCNDNSLHLYDLPSFTERGKILAKQEIRSIQIGPGGIFFTGDGSGQVKVWK 420
Query: 161 LNEKSSADVS 132
+ +S+ +S
Sbjct: 421 WSTESTPILS 430
>ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ricinus communis]
gi|223549969|gb|EEF51456.1| F-box and wd40 domain
protein, putative [Ricinus communis]
Length = 445
Score = 433 bits (1114), Expect = e-119
Identities = 223/410 (54%), Positives = 280/410 (68%), Gaps = 10/410 (2%)
Frame = -1
Query: 1361 VCRFWMAGCCKRSDCRFLHPEVPAPGVKKSWKNPNYHVPKTSQISGVPRRQG----SEFE 1194
VC W AG C R C +LH E+P P P+ +S + P ++G S F
Sbjct: 36 VCHHWRAGRCNRFPCPYLHRELPPP------PPPHGSNGHSSSNNNAPSKRGFSNDSGFS 89
Query: 1193 VKSAKKPCNVTQSAQTSETKDVMKRQNKEPKK--QLCKYWVTGNCVYGDQCKNLHSWYYG 1020
S + +A S V NK +K ++C +WV G C YGD+C+ LHSW G
Sbjct: 90 GPSGSRRSGNFNNA--SSWGRVGNNSNKVLRKTEKVCNFWVQGKCSYGDKCRFLHSWNLG 147
Query: 1019 DGFTMLAKLKGHTKAVTGIALPPGSDKLYSVSKDNSMRVWNCHTGQCGEVVNFDDECGSL 840
+ F++L +L GH K VTGIALP GSDKLY+ SKD ++RVW+C +GQC V+ E G +
Sbjct: 148 ESFSLLTQLDGHQKVVTGIALPSGSDKLYTGSKDETVRVWDCQSGQCMAVIQLGGEVGCM 207
Query: 839 MSEGPCIFVGLQNAIKAWNLEFQAEITLNGPVVGQVYAMEVGNNMFFAATQDGNISVWK- 663
+SEGP IFVG+ N +KAWN + +++L GPV GQVYA+ VGN++ FA TQDG I VWK
Sbjct: 208 ISEGPWIFVGIPNVVKAWNTQTNTDLSLTGPV-GQVYALVVGNDLLFAGTQDGAILVWKY 266
Query: 662 ---TCSSEVAATLRGHTGAVVSLVVGANRLYSGSMDKTIKVWDLETLKCLQTLHGHSEVV 492
T + E AA+L GHT AVVSLVVGANRLYSGSMD +I+VW+LETL+C+QTL H+ VV
Sbjct: 267 NAATFNFEPAASLPGHTVAVVSLVVGANRLYSGSMDHSIRVWNLETLQCVQTLTDHTSVV 326
Query: 491 MSVLCWDSFLLSGSLDGQIKVWAATESGNLEVVNECDEGHGILGFCGITDAEAKPILLCS 312
MSVLCWD FLLS SLD +IKVWAATESGNL+V +E HG+L CG+ D E KP+LLCS
Sbjct: 327 MSVLCWDQFLLSCSLDQKIKVWAATESGNLDVTYTHNEEHGLLTLCGMHDLEGKPVLLCS 386
Query: 311 CNDNSVRLYELPSFNERGRIYAKAEVRTLQIGTGGLFFTGDAMGQLTVWK 162
CNDNSVRL +LPSF+ERG+I+AK E+R +Q G GGLFFTGD GQ+ VWK
Sbjct: 387 CNDNSVRLLDLPSFSERGKIFAKQEIRAIQTGPGGLFFTGDGTGQVRVWK 436
>ref|XP_002865885.1| hypothetical protein ARALYDRAFT_495266 [Arabidopsis lyrata subsp.
lyrata] gi|297311720|gb|EFH42144.1| hypothetical protein
ARALYDRAFT_495266 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 433 bits (1113), Expect = e-119
Identities = 214/413 (51%), Positives = 276/413 (66%), Gaps = 7/413 (1%)
Frame = -1
Query: 1379 SSAKNGVCRFWMAGCCKRSDCRFLHPEVPAPGVKKSWKNPNY---HVPKTSQISGVPRRQ 1209
+ + VC W AG C RS C +LH E+P PG + + P Y V + S +G R+
Sbjct: 32 TDTRQKVCFHWRAGRCNRSPCPYLHRELPGPGPGQG-QGPGYTNKRVAEESGFAGPSHRR 90
Query: 1208 GSEFEVKSAKKPCNVTQSAQTSETKDVMKRQNKEPKKQLCKYWVTGNCVYGDQCKNLHSW 1029
G F S + ++T+ V C +WV GNC YGD+C+ LH W
Sbjct: 91 GPGFNGNSNSSWGRFGGNRTVTKTEKV------------CNFWVDGNCTYGDKCRYLHCW 138
Query: 1028 YYGDGFTMLAKLKGHTKAVTGIALPPGSDKLYSVSKDNSMRVWNCHTGQCGEVVNFDDEC 849
G+ F++L +L GH K V+GIALP GSDKLY+ SKD ++RVW+C +GQC V+ E
Sbjct: 139 SKGESFSLLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGEV 198
Query: 848 GSLMSEGPCIFVGLQNAIKAWNLEFQAEITLNGPVVGQVYAMEVGNNMFFAATQDGNISV 669
G ++SEGP + VG+ N +KAWN+E AE +LNGPV GQVY++ VG ++ FA TQDG+I
Sbjct: 199 GCVLSEGPWLLVGMPNLVKAWNIETNAEQSLNGPV-GQVYSLVVGTDLLFAGTQDGSILA 257
Query: 668 WK----TCSSEVAATLRGHTGAVVSLVVGANRLYSGSMDKTIKVWDLETLKCLQTLHGHS 501
W+ T E AA+L GHT AVV+L VGANRLYSGSMDKTIKVW L+ L+C+QTL H+
Sbjct: 258 WRYNAATNCFEPAASLTGHTLAVVTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTDHT 317
Query: 500 EVVMSVLCWDSFLLSGSLDGQIKVWAATESGNLEVVNECDEGHGILGFCGITDAEAKPIL 321
VVMS++CWD FLLS SLD +K+WAA E GNLE E HG+L CG+ DAEAKP+L
Sbjct: 318 SVVMSLICWDQFLLSCSLDNTVKIWAAVEGGNLEATYTHKEEHGVLALCGVHDAEAKPVL 377
Query: 320 LCSCNDNSVRLYELPSFNERGRIYAKAEVRTLQIGTGGLFFTGDAMGQLTVWK 162
LCSCNDN++RLY+LPSF ERG+I+AK E+R +QIG GG+FFTGD GQ+ VWK
Sbjct: 378 LCSCNDNTLRLYDLPSFTERGKIFAKQEIRAIQIGPGGIFFTGDGTGQVKVWK 430
>ref|NP_200011.1| zinc finger CCCH domain-containing protein 63 [Arabidopsis thaliana]
gi|10177733|dbj|BAB11046.1| unnamed protein product
[Arabidopsis thaliana] gi|332008771|gb|AED96154.1| zinc
finger CCCH domain-containing protein 63 [Arabidopsis
thaliana]
Length = 437
Score = 431 bits (1107), Expect = e-118
Identities = 212/413 (51%), Positives = 277/413 (67%), Gaps = 7/413 (1%)
Frame = -1
Query: 1379 SSAKNGVCRFWMAGCCKRSDCRFLHPEVPAPGVKKSWKNPNY---HVPKTSQISGVPRRQ 1209
+ + VC W AG C RS C +LH E+P PG + + P Y V + S +G R+
Sbjct: 29 TDTRQKVCFHWRAGRCNRSPCPYLHRELPGPGPGQG-QGPGYTNKRVAEESGFAGPSHRR 87
Query: 1208 GSEFEVKSAKKPCNVTQSAQTSETKDVMKRQNKEPKKQLCKYWVTGNCVYGDQCKNLHSW 1029
G F S+ + ++T+ V C +WV GNC YGD+C+ LH W
Sbjct: 88 GPGFNGNSSSSWGRFGGNRTVTKTEKV------------CNFWVDGNCTYGDKCRYLHCW 135
Query: 1028 YYGDGFTMLAKLKGHTKAVTGIALPPGSDKLYSVSKDNSMRVWNCHTGQCGEVVNFDDEC 849
G+ F +L +L GH K V+GIALP GSDKLY+ SKD ++RVW+C +GQC V+ E
Sbjct: 136 SKGESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGEI 195
Query: 848 GSLMSEGPCIFVGLQNAIKAWNLEFQAEITLNGPVVGQVYAMEVGNNMFFAATQDGNISV 669
G ++SEGP + VG+ N +KAWN+E A+ +L+GPV GQVY++ VG ++ FA TQDG+I
Sbjct: 196 GCVLSEGPWLLVGMPNLVKAWNIETNADQSLSGPV-GQVYSLVVGTDLLFAGTQDGSILA 254
Query: 668 WK----TCSSEVAATLRGHTGAVVSLVVGANRLYSGSMDKTIKVWDLETLKCLQTLHGHS 501
W+ T E +A+L GHT AVV+L VGANRLYSGSMDKTIKVW L+ L+C+QTL HS
Sbjct: 255 WRYNAATNCFEPSASLTGHTLAVVTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTDHS 314
Query: 500 EVVMSVLCWDSFLLSGSLDGQIKVWAATESGNLEVVNECDEGHGILGFCGITDAEAKPIL 321
VVMS++CWD FLLS SLD +K+WAA E GNLEV E HG+L CG+ DAEAKP+L
Sbjct: 315 SVVMSLICWDQFLLSCSLDNTVKIWAAIEGGNLEVTYTHKEEHGVLALCGVHDAEAKPVL 374
Query: 320 LCSCNDNSVRLYELPSFNERGRIYAKAEVRTLQIGTGGLFFTGDAMGQLTVWK 162
LC+CNDN++RLY+LPSF ERG+I+AK E+R +QIG GG+FFTGD GQ+ VWK
Sbjct: 375 LCACNDNTLRLYDLPSFTERGKIFAKQEIRAIQIGPGGIFFTGDGTGQVKVWK 427
>ref|XP_002318843.1| predicted protein [Populus trichocarpa] gi|222859516|gb|EEE97063.1|
predicted protein [Populus trichocarpa]
Length = 452
Score = 429 bits (1104), Expect = e-118
Identities = 217/407 (53%), Positives = 280/407 (68%), Gaps = 8/407 (1%)
Frame = -1
Query: 1361 VCRFWMAGCCKRSDCRFLHPEVPAPGVKKSWKNPNYHVPKTSQISGVPRR--QGSEFEVK 1188
VC W AG C R C FLH E+PAP P+ V G +R G++
Sbjct: 44 VCYHWRAGKCNRFPCPFLHRELPAPP-------PHASVNGGGGGGGGAKRGFAGNDSSSF 96
Query: 1187 SAKKPCNVTQSAQTSE--TKDVMKRQNKEPKKQLCKYWVTGNCVYGDQCKNLHSWYYGDG 1014
S ++ N S K ++ + +++C +WV GNC +GD+C+ LHSW GDG
Sbjct: 97 SGRRGGNSNYSNSWGRFGNKGDVRGVKRVSVEKVCNFWVQGNCSFGDKCRYLHSWSLGDG 156
Query: 1013 FTMLAKLKGHTKAVTGIALPPGSDKLYSVSKDNSMRVWNCHTGQCGEVVNFDDECGSLMS 834
F+++ +L+GH K ++GIALP GSDKLY+ SKD ++RVW+C +GQC VVN E G ++S
Sbjct: 157 FSLVTQLEGHQKVISGIALPSGSDKLYTGSKDETVRVWDCQSGQCTGVVNLGGEVGCMIS 216
Query: 833 EGPCIFVGLQNAIKAWNLEFQAEITLNGPVVGQVYAMEVGNNMFFAATQDGNISVWK--- 663
EGP IFVGL N +KAWN + A+++LNGP+ GQVYA+ VGN++ FA TQDG+I VWK
Sbjct: 217 EGPWIFVGLPNVVKAWNTQTNADLSLNGPI-GQVYALVVGNDLLFAGTQDGSILVWKFNA 275
Query: 662 -TCSSEVAATLRGHTGAVVSLVVGANRLYSGSMDKTIKVWDLETLKCLQTLHGHSEVVMS 486
T + E A +L+ H AVVSLVVGANRLYSGSMD +IKVW LETL+C+QTL H+ VVMS
Sbjct: 276 ATYNFEPAVSLKDHKMAVVSLVVGANRLYSGSMDHSIKVWSLETLQCIQTLTDHTSVVMS 335
Query: 485 VLCWDSFLLSGSLDGQIKVWAATESGNLEVVNECDEGHGILGFCGITDAEAKPILLCSCN 306
+LCW+ FLLS SLD IKVWAATESGNLEV +E HG+L CG+ D E KP+LLCS N
Sbjct: 336 LLCWEQFLLSCSLDQTIKVWAATESGNLEVTFTHNEEHGLLTLCGMHDPEGKPVLLCSSN 395
Query: 305 DNSVRLYELPSFNERGRIYAKAEVRTLQIGTGGLFFTGDAMGQLTVW 165
DNSV LY+LPSF+E+G+++AK E+R +Q G GGLFFTGD GQ+ VW
Sbjct: 396 DNSVHLYDLPSFSEKGKMFAKQEIRAIQTGPGGLFFTGDGTGQVRVW 442