BLASTX nr result

ID: Cnidium21_contig00009107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00009107
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265589.1| PREDICTED: uncharacterized protein LOC100262...    69   1e-09
ref|NP_566488.1| uncharacterized protein [Arabidopsis thaliana] ...    57   2e-06
ref|XP_002320899.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002885044.1| hypothetical protein ARALYDRAFT_897717 [Arab...    57   3e-06
ref|XP_003553145.1| PREDICTED: uncharacterized protein LOC100780...    57   4e-06

>ref|XP_002265589.1| PREDICTED: uncharacterized protein LOC100262493 [Vitis vinifera]
           gi|302142756|emb|CBI19959.3| unnamed protein product
           [Vitis vinifera]
          Length = 68

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 36/67 (53%), Positives = 41/67 (61%)
 Frame = -1

Query: 280 GGSRRNDESFLTRIVNSVFSFVRXXXXXXXXXXXXXXXXXXFKDLTARPEYNQILVKKPG 101
           GGS RN  +F TR VNSVF+FVR                  FKDLT+RPEYNQILVKKPG
Sbjct: 3   GGSNRNPSTF-TRAVNSVFTFVRYAEFEILFVLFFLIAFIIFKDLTSRPEYNQILVKKPG 61

Query: 100 AAEWWNF 80
             +WW +
Sbjct: 62  GPDWWPY 68


>ref|NP_566488.1| uncharacterized protein [Arabidopsis thaliana]
           gi|11994213|dbj|BAB01335.1| unnamed protein product
           [Arabidopsis thaliana] gi|21592620|gb|AAM64569.1|
           unknown [Arabidopsis thaliana]
           gi|27808500|gb|AAO24530.1| At3g14430 [Arabidopsis
           thaliana] gi|110736260|dbj|BAF00100.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332642003|gb|AEE75524.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 76

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/63 (47%), Positives = 37/63 (58%)
 Frame = -1

Query: 268 RNDESFLTRIVNSVFSFVRXXXXXXXXXXXXXXXXXXFKDLTARPEYNQILVKKPGAAEW 89
           R D+S LTR V+SVF F R                  FKDLT+RPEYN+ILV+KPG ++ 
Sbjct: 14  RRDDSLLTRFVDSVFYFFRLAEFEILFVLFMLITYVIFKDLTSRPEYNRILVEKPGGSDI 73

Query: 88  WNF 80
           W F
Sbjct: 74  WPF 76


>ref|XP_002320899.1| predicted protein [Populus trichocarpa] gi|222861672|gb|EEE99214.1|
           predicted protein [Populus trichocarpa]
          Length = 77

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/63 (50%), Positives = 40/63 (63%)
 Frame = -1

Query: 277 GSRRNDESFLTRIVNSVFSFVRXXXXXXXXXXXXXXXXXXFKDLTARPEYNQILVKKPGA 98
           GS+RN ES L R++N VF+FVR                  FK+LT+RPEYNQILVKKPG 
Sbjct: 13  GSKRN-ESALARVMNEVFAFVRFAEFEIFFILFFLIAFFFFKNLTSRPEYNQILVKKPGG 71

Query: 97  AEW 89
           A++
Sbjct: 72  ADF 74


>ref|XP_002885044.1| hypothetical protein ARALYDRAFT_897717 [Arabidopsis lyrata subsp.
           lyrata] gi|297330884|gb|EFH61303.1| hypothetical protein
           ARALYDRAFT_897717 [Arabidopsis lyrata subsp. lyrata]
          Length = 76

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/63 (47%), Positives = 37/63 (58%)
 Frame = -1

Query: 268 RNDESFLTRIVNSVFSFVRXXXXXXXXXXXXXXXXXXFKDLTARPEYNQILVKKPGAAEW 89
           R D+S LTR V+SVF F R                  FKDLT+RPEYN+ILV+KPG ++ 
Sbjct: 14  RRDDSLLTRFVDSVFYFFRLAEFEILFVLFILITYIIFKDLTSRPEYNRILVEKPGRSDI 73

Query: 88  WNF 80
           W F
Sbjct: 74  WPF 76


>ref|XP_003553145.1| PREDICTED: uncharacterized protein LOC100780779 [Glycine max]
          Length = 69

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 31/66 (46%), Positives = 38/66 (57%)
 Frame = -1

Query: 277 GSRRNDESFLTRIVNSVFSFVRXXXXXXXXXXXXXXXXXXFKDLTARPEYNQILVKKPGA 98
           G  RN ES LTR V +VF+FVR                  FKD+T+RP+YNQ+ VKKPG 
Sbjct: 5   GETRN-ESLLTRAVAAVFAFVRHAEFEILFFLFFFIAYLLFKDITSRPDYNQMFVKKPGG 63

Query: 97  AEWWNF 80
            E+W F
Sbjct: 64  PEFWPF 69


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