BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008978
         (1587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II tra...   200   1e-48
ref|XP_002532456.1| RNA binding protein, putative [Ricinus commu...   196   1e-47
ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814...   189   2e-45
ref|XP_003548527.1| PREDICTED: uncharacterized protein LOC100818...   187   5e-45
ref|XP_002328215.1| predicted protein [Populus trichocarpa] gi|2...   181   6e-43

>ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like [Cucumis sativus]
           gi|449502064|ref|XP_004161533.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a-like
           [Cucumis sativus]
          Length = 219

 Score =  200 bits (508), Expect = 1e-48
 Identities = 94/117 (80%), Positives = 105/117 (89%)
 Frame = +2

Query: 236 MDHERKNFGRGPRERTGAVDLINQYKLLPHHEFFCKRSLPLSVSDTHYLHNVVGDTEIRK 415
           M+ E K FGRGPRE TGAVDLI+ YKLLPHH+FFCK+SLPLS+SDTHYLHNVVGDTEIRK
Sbjct: 1   MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 416 GEGMQLDQLIQTTSYPRESNVRIQPFDIDVLRESFQLRETGSVDLPASEKGTPTIAG 586
           GEGMQL+QLIQ TSYPRE+N RIQPFD D+L E+FQLRETG VDLP++EKG PTI G
Sbjct: 61  GEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPG 117


>ref|XP_002532456.1| RNA binding protein, putative [Ricinus communis]
           gi|223527846|gb|EEF29942.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 221

 Score =  196 bits (499), Expect = 1e-47
 Identities = 92/116 (79%), Positives = 104/116 (89%)
 Frame = +2

Query: 236 MDHERKNFGRGPRERTGAVDLINQYKLLPHHEFFCKRSLPLSVSDTHYLHNVVGDTEIRK 415
           MD E K FG GPRE TGAVDLI+ +KL+PHHEFFCKRSLPLS+SDTHYLHNVVGD+EIRK
Sbjct: 1   MDPESKKFGSGPRELTGAVDLISHFKLVPHHEFFCKRSLPLSISDTHYLHNVVGDSEIRK 60

Query: 416 GEGMQLDQLIQTTSYPRESNVRIQPFDIDVLRESFQLRETGSVDLPASEKGTPTIA 583
           G+GMQLDQLIQ TSY R+SN RIQPFD+DVLRE+FQL+ET  +DLP +EKGTPTIA
Sbjct: 61  GDGMQLDQLIQNTSYSRDSNARIQPFDLDVLREAFQLKETTPIDLPPAEKGTPTIA 116


>ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814559 [Glycine max]
          Length = 223

 Score =  189 bits (480), Expect = 2e-45
 Identities = 89/117 (76%), Positives = 104/117 (88%)
 Frame = +2

Query: 236 MDHERKNFGRGPRERTGAVDLINQYKLLPHHEFFCKRSLPLSVSDTHYLHNVVGDTEIRK 415
           MD E K FG GPRE TGAVDLI+ +KLLPH+EFFCKRSLP+S++DTHYLHNVVGDTEIRK
Sbjct: 1   MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRSLPVSIADTHYLHNVVGDTEIRK 60

Query: 416 GEGMQLDQLIQTTSYPRESNVRIQPFDIDVLRESFQLRETGSVDLPASEKGTPTIAG 586
           G+GMQL+QLIQ TS  R++N RIQPFD+DVL+E+FQLRET  +DLPA+EKG PTIAG
Sbjct: 61  GDGMQLEQLIQNTSSFRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIAG 117


>ref|XP_003548527.1| PREDICTED: uncharacterized protein LOC100818495 [Glycine max]
          Length = 222

 Score =  187 bits (476), Expect = 5e-45
 Identities = 89/117 (76%), Positives = 104/117 (88%)
 Frame = +2

Query: 236 MDHERKNFGRGPRERTGAVDLINQYKLLPHHEFFCKRSLPLSVSDTHYLHNVVGDTEIRK 415
           MD E K FG GPRE TGAVDLI+ +KLLPH+EFFCKR LP+S++DTHYLHNVVGDTEIRK
Sbjct: 1   MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRPLPVSIADTHYLHNVVGDTEIRK 60

Query: 416 GEGMQLDQLIQTTSYPRESNVRIQPFDIDVLRESFQLRETGSVDLPASEKGTPTIAG 586
           G+GMQLDQLIQ TS+ R++N RIQPFD+DVL+E+FQLRET  +DLPA+EKG PTIAG
Sbjct: 61  GDGMQLDQLIQNTSF-RDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIAG 116


>ref|XP_002328215.1| predicted protein [Populus trichocarpa] gi|222837730|gb|EEE76095.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  181 bits (458), Expect = 6e-43
 Identities = 86/107 (80%), Positives = 98/107 (91%)
 Frame = +2

Query: 266 GPRERTGAVDLINQYKLLPHHEFFCKRSLPLSVSDTHYLHNVVGDTEIRKGEGMQLDQLI 445
           GPRE TGAVDLI+ +KLLPHHEFFCKRSLPLS++DTHYLHNVVGDTEIRKGEGMQLDQLI
Sbjct: 10  GPRELTGAVDLISHFKLLPHHEFFCKRSLPLSIADTHYLHNVVGDTEIRKGEGMQLDQLI 69

Query: 446 QTTSYPRESNVRIQPFDIDVLRESFQLRETGSVDLPASEKGTPTIAG 586
           Q TS  R+SN  I+PFD+DVLRE+FQL+ET  +DLP++EKGTPTIAG
Sbjct: 70  QNTS--RDSNAHIEPFDLDVLREAFQLKETTPIDLPSAEKGTPTIAG 114