BLASTX nr result
ID: Cnidium21_contig00008971
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00008971 (297 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vit... 82 5e-14 emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera] 82 5e-14 emb|CBI36629.3| unnamed protein product [Vitis vinifera] 70 2e-10 ref|XP_003610233.1| RING finger protein [Medicago truncatula] gi... 67 2e-09 ref|XP_002324500.1| predicted protein [Populus trichocarpa] gi|2... 65 6e-09 >ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vitis vinifera] Length = 543 Score = 82.0 bits (201), Expect = 5e-14 Identities = 37/47 (78%), Positives = 41/47 (87%) Frame = +2 Query: 2 ELGYDEENQSCNSLDSQANPQSFTTRTLIWLMGKQNKVVHSAYPPGV 142 ELG DEE QSCNSLDSQANP SF RTL+WLMG+QNKVVHS++PP V Sbjct: 497 ELGCDEEMQSCNSLDSQANPPSFARRTLLWLMGRQNKVVHSSFPPNV 543 >emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera] Length = 543 Score = 82.0 bits (201), Expect = 5e-14 Identities = 37/47 (78%), Positives = 41/47 (87%) Frame = +2 Query: 2 ELGYDEENQSCNSLDSQANPQSFTTRTLIWLMGKQNKVVHSAYPPGV 142 ELG DEE QSCNSLDSQANP SF RTL+WLMG+QNKVVHS++PP V Sbjct: 497 ELGCDEEMQSCNSLDSQANPPSFARRTLLWLMGRQNKVVHSSFPPNV 543 >emb|CBI36629.3| unnamed protein product [Vitis vinifera] Length = 427 Score = 69.7 bits (169), Expect = 2e-10 Identities = 30/38 (78%), Positives = 34/38 (89%) Frame = +2 Query: 29 SCNSLDSQANPQSFTTRTLIWLMGKQNKVVHSAYPPGV 142 SCNSLDSQANP SF RTL+WLMG+QNKVVHS++PP V Sbjct: 390 SCNSLDSQANPPSFARRTLLWLMGRQNKVVHSSFPPNV 427 >ref|XP_003610233.1| RING finger protein [Medicago truncatula] gi|355511288|gb|AES92430.1| RING finger protein [Medicago truncatula] Length = 511 Score = 66.6 bits (161), Expect = 2e-09 Identities = 30/40 (75%), Positives = 33/40 (82%) Frame = +2 Query: 8 GYDEENQSCNSLDSQANPQSFTTRTLIWLMGKQNKVVHSA 127 GYDEENQSC S+DSQA SF RTL+WL GKQNKVVHS+ Sbjct: 467 GYDEENQSCYSMDSQARAPSFARRTLLWLTGKQNKVVHSS 506 >ref|XP_002324500.1| predicted protein [Populus trichocarpa] gi|222865934|gb|EEF03065.1| predicted protein [Populus trichocarpa] Length = 468 Score = 65.1 bits (157), Expect = 6e-09 Identities = 28/45 (62%), Positives = 35/45 (77%) Frame = +2 Query: 8 GYDEENQSCNSLDSQANPQSFTTRTLIWLMGKQNKVVHSAYPPGV 142 G DE+NQSCNSL+ Q SF RTL+WL+G+QNKVVHS++ P V Sbjct: 424 GCDEQNQSCNSLELQVKTPSFARRTLLWLVGRQNKVVHSSFTPNV 468