BLASTX nr result

ID: Cnidium21_contig00008971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008971
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vit...    82   5e-14
emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]    82   5e-14
emb|CBI36629.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_003610233.1| RING finger protein [Medicago truncatula] gi...    67   2e-09
ref|XP_002324500.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09

>ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vitis vinifera]
          Length = 543

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 37/47 (78%), Positives = 41/47 (87%)
 Frame = +2

Query: 2   ELGYDEENQSCNSLDSQANPQSFTTRTLIWLMGKQNKVVHSAYPPGV 142
           ELG DEE QSCNSLDSQANP SF  RTL+WLMG+QNKVVHS++PP V
Sbjct: 497 ELGCDEEMQSCNSLDSQANPPSFARRTLLWLMGRQNKVVHSSFPPNV 543


>emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]
          Length = 543

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 37/47 (78%), Positives = 41/47 (87%)
 Frame = +2

Query: 2   ELGYDEENQSCNSLDSQANPQSFTTRTLIWLMGKQNKVVHSAYPPGV 142
           ELG DEE QSCNSLDSQANP SF  RTL+WLMG+QNKVVHS++PP V
Sbjct: 497 ELGCDEEMQSCNSLDSQANPPSFARRTLLWLMGRQNKVVHSSFPPNV 543


>emb|CBI36629.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = +2

Query: 29  SCNSLDSQANPQSFTTRTLIWLMGKQNKVVHSAYPPGV 142
           SCNSLDSQANP SF  RTL+WLMG+QNKVVHS++PP V
Sbjct: 390 SCNSLDSQANPPSFARRTLLWLMGRQNKVVHSSFPPNV 427


>ref|XP_003610233.1| RING finger protein [Medicago truncatula]
           gi|355511288|gb|AES92430.1| RING finger protein
           [Medicago truncatula]
          Length = 511

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/40 (75%), Positives = 33/40 (82%)
 Frame = +2

Query: 8   GYDEENQSCNSLDSQANPQSFTTRTLIWLMGKQNKVVHSA 127
           GYDEENQSC S+DSQA   SF  RTL+WL GKQNKVVHS+
Sbjct: 467 GYDEENQSCYSMDSQARAPSFARRTLLWLTGKQNKVVHSS 506


>ref|XP_002324500.1| predicted protein [Populus trichocarpa] gi|222865934|gb|EEF03065.1|
           predicted protein [Populus trichocarpa]
          Length = 468

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/45 (62%), Positives = 35/45 (77%)
 Frame = +2

Query: 8   GYDEENQSCNSLDSQANPQSFTTRTLIWLMGKQNKVVHSAYPPGV 142
           G DE+NQSCNSL+ Q    SF  RTL+WL+G+QNKVVHS++ P V
Sbjct: 424 GCDEQNQSCNSLELQVKTPSFARRTLLWLVGRQNKVVHSSFTPNV 468


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