BLASTX nr result

ID: Cnidium21_contig00008958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008958
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF98289.1| 1-deoxy-D-xylulose 5-phosphate synthase [Hevea b...    95   5e-18
gb|ABF18929.1| putative 1-deoxy-D-xylulose 5-phosphate synthase ...    95   5e-18
emb|CAA09804.2| 1-deoxyxylulose 5-phosphate synthase [Catharanth...    95   7e-18
gb|AFU93069.1| chloroplast 1-deoxy-D-xylulose-5-phosphate syntha...    91   1e-16
ref|XP_003530591.1| PREDICTED: probable 1-deoxy-D-xylulose-5-pho...    86   2e-15

>dbj|BAF98289.1| 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
          Length = 711

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/83 (56%), Positives = 59/83 (71%)
 Frame = +2

Query: 41  MAIPGTAIRLHHSIPQGLPSSRLNNHVARKKFCLNAVATNPNGEERKMIRKESDGWKIDY 220
           MA+  ++   + S    L + R +N   RK+FCL A A +P+ E + MIRKE DGWKID+
Sbjct: 1   MAVSSSSFVSNQSFSPFLKAPR-SNLCGRKQFCLRASAGHPDEEGKMMIRKEKDGWKIDF 59

Query: 221 SGEKPPTPLLDTINYPIHMKNLS 289
           SGEKPPTPLLDTINYP+H KNLS
Sbjct: 60  SGEKPPTPLLDTINYPVHTKNLS 82


>gb|ABF18929.1| putative 1-deoxy-D-xylulose 5-phosphate synthase [Hevea
           brasiliensis]
          Length = 711

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/83 (56%), Positives = 59/83 (71%)
 Frame = +2

Query: 41  MAIPGTAIRLHHSIPQGLPSSRLNNHVARKKFCLNAVATNPNGEERKMIRKESDGWKIDY 220
           MA+  ++   + S    L + R +N   RK+FCL A A +P+ E + MIRKE DGWKID+
Sbjct: 1   MAVSSSSFVSNQSFSPFLKAPR-SNLCGRKQFCLRASAGHPDEEGKMMIRKEKDGWKIDF 59

Query: 221 SGEKPPTPLLDTINYPIHMKNLS 289
           SGEKPPTPLLDTINYP+H KNLS
Sbjct: 60  SGEKPPTPLLDTINYPVHTKNLS 82


>emb|CAA09804.2| 1-deoxyxylulose 5-phosphate synthase [Catharanthus roseus]
          Length = 716

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 50/87 (57%), Positives = 60/87 (68%), Gaps = 4/87 (4%)
 Frame = +2

Query: 41  MAIPGTAIRLHHSIPQGLPSSRLNNHVARKKFCLNAVATNPNG--EERKMI--RKESDGW 208
           MA+ G  I L+  I     +    N+ ARK+FCL A + N +   EE KMI  +KE DGW
Sbjct: 1   MAVSGAVIGLNPPISPAYWTVPRLNYTARKQFCLRASSVNSSNDAEEGKMISIKKEKDGW 60

Query: 209 KIDYSGEKPPTPLLDTINYPIHMKNLS 289
           KID+SGEKPPTPLLDTINYP+HMKNLS
Sbjct: 61  KIDFSGEKPPTPLLDTINYPVHMKNLS 87


>gb|AFU93069.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Eucommia
           ulmoides]
          Length = 713

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/84 (53%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
 Frame = +2

Query: 41  MAIPGTAIRLHHSIPQGLPSSRLNNHVARKKFCLNAVATNPNGEERK-MIRKESDGWKID 217
           MA+ G+ I L+ S      S +L +   ++ F   +V+ +  G+E K MIRKE+DGWKID
Sbjct: 1   MAVQGSVIGLNQSFAPCFLSPKLKHFPQKQFFARASVSKSDGGDEGKLMIRKENDGWKID 60

Query: 218 YSGEKPPTPLLDTINYPIHMKNLS 289
           +SGEKPPTPLLDTIN+P+HMKNLS
Sbjct: 61  FSGEKPPTPLLDTINFPVHMKNLS 84


>ref|XP_003530591.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 714

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 38/58 (65%), Positives = 45/58 (77%)
 Frame = +2

Query: 116 HVARKKFCLNAVATNPNGEERKMIRKESDGWKIDYSGEKPPTPLLDTINYPIHMKNLS 289
           H  R KFC+   A+    EER +I+KE DGWKI+YSGEKP TPLLDT+N+PIHMKNLS
Sbjct: 28  HGCRNKFCVRVSASGSADEERTIIKKEKDGWKINYSGEKPATPLLDTVNHPIHMKNLS 85


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