BLASTX nr result

ID: Cnidium21_contig00008927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008927
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264159.1| PREDICTED: signal recognition particle 54 kD...   317   1e-84
ref|XP_003543686.1| PREDICTED: signal recognition particle 54 kD...   317   2e-84
ref|XP_003528309.1| PREDICTED: signal recognition particle 54 kD...   316   2e-84
ref|XP_002517663.1| signal recognition particle 54 kD protein, p...   316   2e-84
ref|XP_003531723.1| PREDICTED: signal recognition particle 54 kD...   315   4e-84

>ref|XP_002264159.1| PREDICTED: signal recognition particle 54 kDa protein 2 [Vitis
           vinifera]
          Length = 495

 Score =  317 bits (812), Expect = 1e-84
 Identities = 166/236 (70%), Positives = 191/236 (80%), Gaps = 7/236 (2%)
 Frame = +3

Query: 3   QAAFDQARAFKQSVSVGSVIITKMDGHAKGGGALSAVAATKSPVTFIGTGEHMDEFDEFN 182
           QAAFDQA+AF+QSV+VG+VIITKMDGHAKGGGALSAVAATKSPV FIGTGEHMDEF+ F+
Sbjct: 227 QAAFDQAQAFRQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFD 286

Query: 183 VKSFAERLTGIRNLSGFVKKVHEVVPMDQHTEFLQKLSENKFTLRSMYEMYRGILETGLT 362
           VK F  RL G+ + SGF+ K+HEVVPMDQ  E LQKLSE  FTLR MYE ++ IL+ G  
Sbjct: 287 VKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPI 346

Query: 363 SQIFSMLPGFNAELIPKGQENEQQRKIKRCMIMMDSMTKEELDSTNPKLMNESRIMRIAR 542
            Q+FSMLPGF+AEL+PKG+E E Q KIKR M MMDSMT EELD++NPKLMNESRIMRIAR
Sbjct: 347 GQVFSMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDTSNPKLMNESRIMRIAR 406

Query: 543 GSGSQVRDVQEMLEEYKRLAKMFGDMKGRNKKGLKIPQNGE-------INARQMSK 689
           GSG QVR+V EMLEEYKRLAK++  M     KGLKIP+ GE       +NA+ MSK
Sbjct: 407 GSGRQVREVMEMLEEYKRLAKIWSKM-----KGLKIPKKGEMSALSRNMNAQHMSK 457


>ref|XP_003543686.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
           [Glycine max]
          Length = 500

 Score =  317 bits (811), Expect = 2e-84
 Identities = 164/236 (69%), Positives = 192/236 (81%), Gaps = 7/236 (2%)
 Frame = +3

Query: 3   QAAFDQARAFKQSVSVGSVIITKMDGHAKGGGALSAVAATKSPVTFIGTGEHMDEFDEFN 182
           QAAFDQA+AFKQSV+VG+VI+TKMDGHAKGGGALSAVAATKSPV FIGTGEHMDEF+ F+
Sbjct: 227 QAAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFD 286

Query: 183 VKSFAERLTGIRNLSGFVKKVHEVVPMDQHTEFLQKLSENKFTLRSMYEMYRGILETGLT 362
           VK F  RL G+ + SGF+ K+HEVVPMDQ  E LQKLSE  FTLR MYE ++ IL+ G  
Sbjct: 287 VKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPI 346

Query: 363 SQIFSMLPGFNAELIPKGQENEQQRKIKRCMIMMDSMTKEELDSTNPKLMNESRIMRIAR 542
           SQ+FSMLPGF+AEL+PKG+E E Q KIKR M MMDSMT EELDS+NPKLMNESR+MRIAR
Sbjct: 347 SQVFSMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIAR 406

Query: 543 GSGSQVRDVQEMLEEYKRLAKMFGDMKGRNKKGLKIPQNGE-------INARQMSK 689
           G+G Q+R+V EMLEEYKRLAK++  M     KGLKIP+ G+       +NA+ MSK
Sbjct: 407 GAGRQIREVMEMLEEYKRLAKIWSKM-----KGLKIPKKGDMSALSRNMNAQHMSK 457


>ref|XP_003528309.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
           [Glycine max]
          Length = 495

 Score =  316 bits (810), Expect = 2e-84
 Identities = 165/236 (69%), Positives = 191/236 (80%), Gaps = 7/236 (2%)
 Frame = +3

Query: 3   QAAFDQARAFKQSVSVGSVIITKMDGHAKGGGALSAVAATKSPVTFIGTGEHMDEFDEFN 182
           QAAFDQA+AFKQSV+VG+VI+TKMDGHAKGGGALSAVAATKSPV FIGTGEHMDEF+ F+
Sbjct: 227 QAAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFD 286

Query: 183 VKSFAERLTGIRNLSGFVKKVHEVVPMDQHTEFLQKLSENKFTLRSMYEMYRGILETGLT 362
           VK F  RL G+ + SGF+ K+HEVVPMDQ  E LQKLSE  FTLR MYE ++ +L+ G  
Sbjct: 287 VKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPI 346

Query: 363 SQIFSMLPGFNAELIPKGQENEQQRKIKRCMIMMDSMTKEELDSTNPKLMNESRIMRIAR 542
           SQ+FSMLPGF+AEL+PKG+E E Q KIKR M MMDSMT EELDS+NPKLMNESR+MRIAR
Sbjct: 347 SQVFSMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIAR 406

Query: 543 GSGSQVRDVQEMLEEYKRLAKMFGDMKGRNKKGLKIPQNGE-------INARQMSK 689
           GSG  VR+V EMLEEYKRLAK++  M     KGLKIP+ GE       +NA+ MSK
Sbjct: 407 GSGRPVREVMEMLEEYKRLAKIWSKM-----KGLKIPKKGEMSALSRNMNAQHMSK 457


>ref|XP_002517663.1| signal recognition particle 54 kD protein, putative [Ricinus
           communis] gi|223543295|gb|EEF44827.1| signal recognition
           particle 54 kD protein, putative [Ricinus communis]
          Length = 497

 Score =  316 bits (810), Expect = 2e-84
 Identities = 165/236 (69%), Positives = 190/236 (80%), Gaps = 7/236 (2%)
 Frame = +3

Query: 3   QAAFDQARAFKQSVSVGSVIITKMDGHAKGGGALSAVAATKSPVTFIGTGEHMDEFDEFN 182
           QAAFDQA+AFKQSV+VG+VI+TKMDGHAKGGGALSAVAATKSPV FIGTGEHMDEF+ F+
Sbjct: 227 QAAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFD 286

Query: 183 VKSFAERLTGIRNLSGFVKKVHEVVPMDQHTEFLQKLSENKFTLRSMYEMYRGILETGLT 362
           VK F  RL G+ + SGF+ K+HEVVPMDQ  E LQKLSE  FTLR MYE ++ IL+ G  
Sbjct: 287 VKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPI 346

Query: 363 SQIFSMLPGFNAELIPKGQENEQQRKIKRCMIMMDSMTKEELDSTNPKLMNESRIMRIAR 542
            Q+FSMLPGF+AEL+PKG+E E Q KIKR M MMDSMT EELDS+NPKLMN+SRIMRIAR
Sbjct: 347 GQVFSMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIAR 406

Query: 543 GSGSQVRDVQEMLEEYKRLAKMFGDMKGRNKKGLKIPQNGE-------INARQMSK 689
           GSG QVR+V EM EEYKRLAK++  M     KGLKIP+ GE       +NA+ MSK
Sbjct: 407 GSGRQVREVMEMFEEYKRLAKIWSKM-----KGLKIPKKGEMSALSRNMNAQHMSK 457


>ref|XP_003531723.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
           isoform 2 [Glycine max]
          Length = 500

 Score =  315 bits (808), Expect = 4e-84
 Identities = 165/236 (69%), Positives = 191/236 (80%), Gaps = 7/236 (2%)
 Frame = +3

Query: 3   QAAFDQARAFKQSVSVGSVIITKMDGHAKGGGALSAVAATKSPVTFIGTGEHMDEFDEFN 182
           QAAFDQA+AFKQSV+VG+VI+TKMDGHAKGGGALSAVAATKSPV FIGTGEHMDEF+ F+
Sbjct: 232 QAAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFD 291

Query: 183 VKSFAERLTGIRNLSGFVKKVHEVVPMDQHTEFLQKLSENKFTLRSMYEMYRGILETGLT 362
           VK F  RL G+ + SGF+ K+HEVVPMDQ  E LQKLSE  FTLR MYE ++ IL+ G  
Sbjct: 292 VKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPI 351

Query: 363 SQIFSMLPGFNAELIPKGQENEQQRKIKRCMIMMDSMTKEELDSTNPKLMNESRIMRIAR 542
           SQ+FSMLPGF+AEL+PKG+E E Q KIKR M MMDSMT EELDS+NPKL+NESR+MRIAR
Sbjct: 352 SQVFSMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLINESRMMRIAR 411

Query: 543 GSGSQVRDVQEMLEEYKRLAKMFGDMKGRNKKGLKIPQNGE-------INARQMSK 689
           GSG  VR+V EMLEEYKRLAK++  M     KGLKIP+ GE       +NA+ MSK
Sbjct: 412 GSGRPVREVMEMLEEYKRLAKIWSKM-----KGLKIPKKGEMSALSRNMNAQHMSK 462


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