BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008858
         (3944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g...   489   e-135
emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]   489   e-135
ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g...   479   e-132
ref|XP_002305041.1| predicted protein [Populus trichocarpa] gi|2...   459   e-126
ref|XP_003593895.1| Heterogeneous nuclear ribonucleoprotein K [M...   433   e-118

>ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
          Length = 623

 Score =  489 bits (1258), Expect = e-135
 Identities = 254/399 (63%), Positives = 302/399 (75%)
 Frame = +2

Query: 74   MVEKGKRSHSRSEKYYDGDSRNPKRRANDRDEKVHNDELVVYRILCPDRVIGSVIGKSGK 253
            M E GKR   RS++  DGD++  KRR N+RDEK  +DEL+VYRILCPD VIGSVIGKSGK
Sbjct: 1    MGETGKRF--RSQRDQDGDNKIQKRRVNERDEK-GSDELIVYRILCPDGVIGSVIGKSGK 57

Query: 254  VINTIRQDSRAKVKVVDPFPGAKDRVLTIYCYXXXXXXXXXXXXXXXXXPLCAAQEALLM 433
            VIN+IRQD+RAK+KVVDPFPGAKDRV+TIYCY                 PLC AQ+ALL 
Sbjct: 58   VINSIRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLK 117

Query: 434  VHTVISNAVASLGDSHNKDSDKEECQILVPSSQSANIIGKSGSTIKKLRGKTRTNIRVTS 613
            VH  I NAVASL +S  K  DKEECQILVPSSQSAN+IGK+G+TIK+LR KTR NI++T+
Sbjct: 118  VHAAIVNAVASLENSDKKKKDKEECQILVPSSQSANVIGKAGATIKRLRSKTRANIKITA 177

Query: 614  KDASDPAHSCAMHFDNFIQITGESEAVKKALFAISAIMYKFGPKEDISLETTVQXXXXXX 793
            KD++DP+HSCAM FDNF+ I G+SEAVKKALFAISAIMYKF P+E+I L+TTV       
Sbjct: 178  KDSTDPSHSCAMEFDNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSI 237

Query: 794  XXXXXXXXYPAAGLYPGLDSIVNSRSLPSILSATHVPELSHYADAGHTWXXXXXXXXXXX 973
                    YPA G YP  DSIV++RS+P +L+ATHVPEL  Y+D G TW           
Sbjct: 238  IIPSDVPIYPAGGFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTW-PVYSSNLPVV 296

Query: 974  XXXXASRSEELIIKVLCSSSKIGRVIGKGGASIKSVRQTSGARVDVDDKKTDNNECTITI 1153
                ASRSEELII+VLC   KIGRVIG+GG+SIKSVR+ SGA V+VDD K D +EC IT+
Sbjct: 297  SGYGASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITV 356

Query: 1154 TSTEKLDDMKSMSVEAVLLLQEKINDEEDDTISIRLLIP 1270
            TSTE +DD+KSM+VEAVLLLQ KINDE+DDT++IRLL+P
Sbjct: 357  TSTESVDDLKSMAVEAVLLLQAKINDEDDDTVAIRLLVP 395



 Score =  149 bits (377), Expect = 5e-33
 Identities = 91/178 (51%), Positives = 103/178 (57%)
 Frame = +2

Query: 1466 RDALVQIXXXXXXXXXXXXEGNRNPSDGVGLGSLYPGSASHSMPQVLPGIPPVGHTGYEQ 1645
            RDALVQI            +   N S   G  SLY G A  S+  VLP  PPV    Y+Q
Sbjct: 449  RDALVQIVLRLRDDALKDRDTGHNTS--AGTDSLYSGGAGLSVSSVLPSAPPVAPLSYDQ 506

Query: 1646 QRGDGGSGLNMLXXXXXXXXXXLPMXXXXXXXXXXXXXXXXXXXXPPTDLEMVVPAHAVG 1825
             R + GSGL +L          L +                     P+  +MV+PA+AVG
Sbjct: 507  -RAETGSGLGLLSSSSLYGYGSLSVGENAYGSMSSYSSKLYGGLPTPSTFDMVIPANAVG 565

Query: 1826 KVMGKGGANIDNIRKISGADVEISQSKSSRGDRVALISGTPEQKRAAENLIQAFIMST 1999
            KVMGKGGANI NIRKISGA +EIS SKSSRGDRVALISGTPEQKR AENLIQAFIM+T
Sbjct: 566  KVMGKGGANIANIRKISGAVIEISDSKSSRGDRVALISGTPEQKRTAENLIQAFIMAT 623



 Score = 72.4 bits (176), Expect = 9e-10
 Identities = 88/364 (24%), Positives = 145/364 (39%), Gaps = 20/364 (5%)
 Frame = +2

Query: 179  NDELVVYRILCPDRVIGSVIGKSGKVINTIRQDSRAKVKVVDPFPGAKDRVLTIYCYXXX 358
            ++EL++ R+LCP   IG VIG+ G  I ++R+ S A V+V D      + ++T+      
Sbjct: 304  SEELII-RVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESV 362

Query: 359  XXXXXXXXXXXXXXPLCAAQEALLMVHTVISNAVASLGDSHNKDSDKEECQILVPSSQSA 538
                              A EA+L++   I++          +D D    ++LVPS    
Sbjct: 363  DDLKSM------------AVEAVLLLQAKIND----------EDDDTVAIRLLVPSKIIG 400

Query: 539  NIIGKSGSTIKKLRGKTRTNIRVTSKDASDPAHSCAMHFDNFIQITGESEAVKKALFAIS 718
             IIGKSGS I ++R +TR ++R++  +       CA   D  I++ GE  +V+ AL  I 
Sbjct: 401  CIIGKSGSIINEIRKRTRADVRISKSERP----KCADANDELIEVVGEVGSVRDALVQIV 456

Query: 719  AIMYKFGPKE-DISLETTVQXXXXXXXXXXXXXXYPAAGLYPGLDSIVNSRSLPSILSAT 895
              +     K+ D    T+                     LY G   +  S  LP   SA 
Sbjct: 457  LRLRDDALKDRDTGHNTSA----------------GTDSLYSGGAGLSVSSVLP---SAP 497

Query: 896  HVPELSHYADAGHTWXXXXXXXXXXXXXXXASRSEELIIKVLCSSSKI------------ 1039
             V  LS+   A                    S  E     +   SSK+            
Sbjct: 498  PVAPLSYDQRAETGSGLGLLSSSSLYGYGSLSVGENAYGSMSSYSSKLYGGLPTPSTFDM 557

Query: 1040 ---GRVIGK----GGASIKSVRQTSGARVDVDDKKTDNNECTITITSTEKLDDMKSMSVE 1198
                  +GK    GGA+I ++R+ SGA +++ D K+   +    I+ T +        ++
Sbjct: 558  VIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSRGDRVALISGTPEQKRTAENLIQ 617

Query: 1199 AVLL 1210
            A ++
Sbjct: 618  AFIM 621


>emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]
          Length = 637

 Score =  489 bits (1258), Expect = e-135
 Identities = 254/399 (63%), Positives = 302/399 (75%)
 Frame = +2

Query: 74   MVEKGKRSHSRSEKYYDGDSRNPKRRANDRDEKVHNDELVVYRILCPDRVIGSVIGKSGK 253
            M E GKR   RS++  DGD++  KRR N+RDEK  +DEL+VYRILCPD VIGSVIGKSGK
Sbjct: 1    MGETGKRF--RSQRDQDGDNKIQKRRVNERDEK-GSDELIVYRILCPDGVIGSVIGKSGK 57

Query: 254  VINTIRQDSRAKVKVVDPFPGAKDRVLTIYCYXXXXXXXXXXXXXXXXXPLCAAQEALLM 433
            VIN+IRQD+RAK+KVVDPFPGAKDRV+TIYCY                 PLC AQ+ALL 
Sbjct: 58   VINSIRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLK 117

Query: 434  VHTVISNAVASLGDSHNKDSDKEECQILVPSSQSANIIGKSGSTIKKLRGKTRTNIRVTS 613
            VH  I NAVASL +S  K  DKEECQILVPSSQSAN+IGK+G+TIK+LR KTR NI++T+
Sbjct: 118  VHAAIVNAVASLENSDKKKKDKEECQILVPSSQSANVIGKAGATIKRLRSKTRANIKITA 177

Query: 614  KDASDPAHSCAMHFDNFIQITGESEAVKKALFAISAIMYKFGPKEDISLETTVQXXXXXX 793
            KD++DP+HSCAM FDNF+ I G+SEAVKKALFAISAIMYKF P+E+I L+TTV       
Sbjct: 178  KDSTDPSHSCAMEFDNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSI 237

Query: 794  XXXXXXXXYPAAGLYPGLDSIVNSRSLPSILSATHVPELSHYADAGHTWXXXXXXXXXXX 973
                    YPA G YP  DSIV++RS+P +L+ATHVPEL  Y+D G TW           
Sbjct: 238  IIPSDVPIYPAGGFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTW-PVYSSNLPVV 296

Query: 974  XXXXASRSEELIIKVLCSSSKIGRVIGKGGASIKSVRQTSGARVDVDDKKTDNNECTITI 1153
                ASRSEELII+VLC   KIGRVIG+GG+SIKSVR+ SGA V+VDD K D +EC IT+
Sbjct: 297  SGYGASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITV 356

Query: 1154 TSTEKLDDMKSMSVEAVLLLQEKINDEEDDTISIRLLIP 1270
            TSTE +DD+KSM+VEAVLLLQ KINDE+DDT++IRLL+P
Sbjct: 357  TSTESVDDLKSMAVEAVLLLQAKINDEDDDTVAIRLLVP 395



 Score =  140 bits (353), Expect = 3e-30
 Identities = 91/192 (47%), Positives = 103/192 (53%), Gaps = 14/192 (7%)
 Frame = +2

Query: 1466 RDALVQIXXXXXXXXXXXXEGNRNPSDGVGLGSLYPGSASHSMPQVLPGIPPVGHTGYEQ 1645
            RDALVQI            +   N S   G  SLY G A  S+  VLP  PPV    Y+Q
Sbjct: 449  RDALVQIVLRLRDDALKDRDTGHNTS--AGTDSLYSGGAGLSVSSVLPSAPPVAPLSYDQ 506

Query: 1646 QRGDGGSGLNMLXXXXXXXXXXLPMXXXXXXXXXXXXXXXXXXXXP-------------- 1783
             R + GSGL +L          L +                                   
Sbjct: 507  -RAETGSGLGLLSSSSLYGYGSLSLFFAVKVVVVFNGEVGENAYGSMSSYSSKLYGGLPT 565

Query: 1784 PTDLEMVVPAHAVGKVMGKGGANIDNIRKISGADVEISQSKSSRGDRVALISGTPEQKRA 1963
            P+  +MV+PA+AVGKVMGKGGANI NIRKISGA +EIS SKSSRGDRVALISGTPEQKR 
Sbjct: 566  PSTFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSRGDRVALISGTPEQKRT 625

Query: 1964 AENLIQAFIMST 1999
            AENLIQAFIM+T
Sbjct: 626  AENLIQAFIMAT 637



 Score = 70.1 bits (170), Expect = 5e-09
 Identities = 53/179 (29%), Positives = 87/179 (48%)
 Frame = +2

Query: 179 NDELVVYRILCPDRVIGSVIGKSGKVINTIRQDSRAKVKVVDPFPGAKDRVLTIYCYXXX 358
           ++EL++ R+LCP   IG VIG+ G  I ++R+ S A V+V D      + ++T+      
Sbjct: 304 SEELII-RVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESV 362

Query: 359 XXXXXXXXXXXXXXPLCAAQEALLMVHTVISNAVASLGDSHNKDSDKEECQILVPSSQSA 538
                             A EA+L++   I++          +D D    ++LVPS    
Sbjct: 363 DDLKSM------------AVEAVLLLQAKIND----------EDDDTVAIRLLVPSKIIG 400

Query: 539 NIIGKSGSTIKKLRGKTRTNIRVTSKDASDPAHSCAMHFDNFIQITGESEAVKKALFAI 715
            IIGKSGS I ++R +TR ++R++  +       CA   D  I++ GE  +V+ AL  I
Sbjct: 401 CIIGKSGSIINEIRKRTRADVRISKSERP----KCADANDELIEVVGEVGSVRDALVQI 455


>ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 625

 Score =  479 bits (1234), Expect = e-132
 Identities = 245/399 (61%), Positives = 301/399 (75%)
 Frame = +2

Query: 74   MVEKGKRSHSRSEKYYDGDSRNPKRRANDRDEKVHNDELVVYRILCPDRVIGSVIGKSGK 253
            M E GKR HS+ +  +DGD ++ KRR  DRD++  NDEL+VYRILCPD VIGSVIGK+GK
Sbjct: 1    MGETGKRYHSQRD--HDGDRKHQKRRMTDRDDR-GNDELIVYRILCPDEVIGSVIGKNGK 57

Query: 254  VINTIRQDSRAKVKVVDPFPGAKDRVLTIYCYXXXXXXXXXXXXXXXXXPLCAAQEALLM 433
            VIN+IRQ++RAKVKVVDPFPG+KDRV+TIYCY                 PLCAAQ+ALL 
Sbjct: 58   VINSIRQETRAKVKVVDPFPGSKDRVITIYCYVKEKEDVEIDDEFAGKEPLCAAQDALLK 117

Query: 434  VHTVISNAVASLGDSHNKDSDKEECQILVPSSQSANIIGKSGSTIKKLRGKTRTNIRVTS 613
            VH  I+N++A++GDS  K  D++ECQILVPSSQSANIIGK+G+TIKKLR KTR NI+VT+
Sbjct: 118  VHVAIANSIAAIGDSEKKRKDRDECQILVPSSQSANIIGKAGATIKKLRSKTRANIKVTA 177

Query: 614  KDASDPAHSCAMHFDNFIQITGESEAVKKALFAISAIMYKFGPKEDISLETTVQXXXXXX 793
            KDA+DP HSCAM FDNF+ ITGESEAVK+ALFA+S+IMYKFGP+EDISL+T V       
Sbjct: 178  KDAADPTHSCAMEFDNFVVITGESEAVKRALFAVSSIMYKFGPREDISLDTAVPEAPPSI 237

Query: 794  XXXXXXXXYPAAGLYPGLDSIVNSRSLPSILSATHVPELSHYADAGHTWXXXXXXXXXXX 973
                    YP  GLYP  D IV  R++P I+ AT+VP+L  YADAG++W           
Sbjct: 238  IIPSDVPVYPPGGLYPASDPIVTPRAVPQIIGATNVPDLQGYADAGNSW-PMYSSALPVV 296

Query: 974  XXXXASRSEELIIKVLCSSSKIGRVIGKGGASIKSVRQTSGARVDVDDKKTDNNECTITI 1153
                ASRSEELII++LC S KIGRVIGKGG++IKS+RQ SGA ++VDD K + +EC I I
Sbjct: 297  SGVGASRSEELIIRMLCPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECLIII 356

Query: 1154 TSTEKLDDMKSMSVEAVLLLQEKINDEEDDTISIRLLIP 1270
            T+TE   D+KSM+VEAVLL+Q KINDE+D T+SIRLL+P
Sbjct: 357  TTTESPSDLKSMAVEAVLLMQGKINDEDDTTVSIRLLVP 395



 Score =  157 bits (397), Expect = 2e-35
 Identities = 89/179 (49%), Positives = 109/179 (60%), Gaps = 1/179 (0%)
 Frame = +2

Query: 1466 RDALVQIXXXXXXXXXXXXEGNRNPSDGVGLGSLYPGSASHSMPQVLPGIPPVGHTGYEQ 1645
            RDAL+QI            +   NPS  +G  SLYPGSA  S+P ++  +PPV       
Sbjct: 449  RDALIQIILRLRDDVLRERDTGHNPS--IGAESLYPGSAGLSLPSMMHSVPPVAAPMVYD 506

Query: 1646 QRGDGGSGLNMLXXXXXXXXXX-LPMXXXXXXXXXXXXXXXXXXXXPPTDLEMVVPAHAV 1822
             R + G+GL ML           LPM                    PP+ L+M++PA+AV
Sbjct: 507  HRAESGAGLGMLSPSSPYGGYGSLPMGDNGYGSMSSYATKLYGGLPPPSTLDMLIPANAV 566

Query: 1823 GKVMGKGGANIDNIRKISGADVEISQSKSSRGDRVALISGTPEQKRAAENLIQAFIMST 1999
            GKV+GKGGANI NIRKISGA +EIS +KS+RGDR+ALISGTPEQKRAAENLIQAFIM+T
Sbjct: 567  GKVLGKGGANIANIRKISGASIEISDNKSARGDRIALISGTPEQKRAAENLIQAFIMAT 625



 Score = 83.2 bits (204), Expect = 5e-13
 Identities = 87/368 (23%), Positives = 157/368 (42%), Gaps = 24/368 (6%)
 Frame = +2

Query: 179  NDELVVYRILCPDRVIGSVIGKSGKVINTIRQDSRAKVKVVDPFPGAKDRVLTIYCYXXX 358
            ++EL++ R+LCP   IG VIGK G  I ++RQ S A ++V D      + ++ I      
Sbjct: 304  SEELII-RMLCPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECLIIITTTESP 362

Query: 359  XXXXXXXXXXXXXXPLCAAQEALLMVHTVISNAVASLGDSHNKDSDKEECQILVPSSQSA 538
                              A EA+L++           G  +++D      ++LVPS    
Sbjct: 363  SDLKSM------------AVEAVLLMQ----------GKINDEDDTTVSIRLLVPSKVIG 400

Query: 539  NIIGKSGSTIKKLRGKTRTNIRVTSKDASDPAHSCAMHFDNFIQITGESEAVKKALFAIS 718
             IIGKSGS I ++R +T+ ++R++  D       CA   D  +++ G  + V+ AL  I 
Sbjct: 401  CIIGKSGSIINEIRKRTKADVRISKGDKP----KCADANDELVEVGGSVDCVRDALIQII 456

Query: 719  AIMYKFGPKEDISLETTVQXXXXXXXXXXXXXXYPAAGLYPGLDSIVNSRSLPSILSATH 898
              +     ++D+  E                    A  LYPG   +    SLPS++ +  
Sbjct: 457  LRL-----RDDVLRERDT----------GHNPSIGAESLYPGSAGL----SLPSMMHS-- 495

Query: 899  VPELS------HYADAG----------HTWXXXXXXXXXXXXXXXASRSEEL-------- 1006
            VP ++      H A++G                            +S + +L        
Sbjct: 496  VPPVAAPMVYDHRAESGAGLGMLSPSSPYGGYGSLPMGDNGYGSMSSYATKLYGGLPPPS 555

Query: 1007 IIKVLCSSSKIGRVIGKGGASIKSVRQTSGARVDVDDKKTDNNECTITITSTEKLDDMKS 1186
             + +L  ++ +G+V+GKGGA+I ++R+ SGA +++ D K+   +    I+ T +      
Sbjct: 556  TLDMLIPANAVGKVLGKGGANIANIRKISGASIEISDNKSARGDRIALISGTPEQKRAAE 615

Query: 1187 MSVEAVLL 1210
              ++A ++
Sbjct: 616  NLIQAFIM 623


>ref|XP_002305041.1| predicted protein [Populus trichocarpa] gi|222848005|gb|EEE85552.1|
            predicted protein [Populus trichocarpa]
          Length = 623

 Score =  459 bits (1180), Expect = e-126
 Identities = 241/399 (60%), Positives = 285/399 (71%)
 Frame = +2

Query: 74   MVEKGKRSHSRSEKYYDGDSRNPKRRANDRDEKVHNDELVVYRILCPDRVIGSVIGKSGK 253
            MVE GKRS  R ++ YDGD+ N KR  +++     NDELVVYRILCPD VIGSVIGKSGK
Sbjct: 1    MVESGKRS--RPQRDYDGDTNNQKRHKDNKG--TDNDELVVYRILCPDEVIGSVIGKSGK 56

Query: 254  VINTIRQDSRAKVKVVDPFPGAKDRVLTIYCYXXXXXXXXXXXXXXXXXPLCAAQEALLM 433
            VIN+IR +SRA+VKVVDPFPGA  RV+TIYC                  PLC AQ+ALL 
Sbjct: 57   VINSIRNESRARVKVVDPFPGAMYRVITIYCNVKEKGDADVDDDFHQADPLCPAQDALLK 116

Query: 434  VHTVISNAVASLGDSHNKDSDKEECQILVPSSQSANIIGKSGSTIKKLRGKTRTNIRVTS 613
            VH  ISNAVA+LGDS  +  DK+ECQILVP+SQSANIIGK+G+TIKKLR KTR NI++T+
Sbjct: 117  VHAAISNAVAALGDSDKRCRDKKECQILVPTSQSANIIGKAGATIKKLRSKTRANIKITA 176

Query: 614  KDASDPAHSCAMHFDNFIQITGESEAVKKALFAISAIMYKFGPKEDISLETTVQXXXXXX 793
            KDASDP HSCAM FDNF+ ITGESEAVKKALFA+SAIMYKF PKE+I LETTV       
Sbjct: 177  KDASDPTHSCAMDFDNFLLITGESEAVKKALFAVSAIMYKFSPKEEIPLETTVPEAPPSI 236

Query: 794  XXXXXXXXYPAAGLYPGLDSIVNSRSLPSILSATHVPELSHYADAGHTWXXXXXXXXXXX 973
                    Y   G YP  D IV+SRS+P IL ATH+PE   Y D   +W           
Sbjct: 237  IISSDVPIYQPGGFYPNADPIVSSRSVPPILGATHIPEFQGYGDMRSSWPIYSSTVPVVP 296

Query: 974  XXXXASRSEELIIKVLCSSSKIGRVIGKGGASIKSVRQTSGARVDVDDKKTDNNECTITI 1153
                 SRS ELII++LC   KIGRVIGKGG++IKS+RQ SGAR++VDD K D +EC IT+
Sbjct: 297  SFGNTSRS-ELIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRDECIITV 355

Query: 1154 TSTEKLDDMKSMSVEAVLLLQEKINDEEDDTISIRLLIP 1270
             +TE  DD+KSM+VEA+LLLQ KINDE++D + IR L+P
Sbjct: 356  IATESPDDLKSMAVEAILLLQGKINDEDNDIVGIRFLVP 394



 Score =  154 bits (388), Expect = 2e-34
 Identities = 91/179 (50%), Positives = 109/179 (60%), Gaps = 1/179 (0%)
 Frame = +2

Query: 1466 RDALVQIXXXXXXXXXXXXEGNRNPSDGVGLGSLYPGSASHSMPQVLPGIPPVGHTGYEQ 1645
            RDALVQI            +G  N S  VG  S+YP  A  S+P +LP +PPV   GY+Q
Sbjct: 448  RDALVQIVLRLRDDVLKEKDGGLNSS--VGTDSVYPVHAGISIPSILPSVPPVAPMGYDQ 505

Query: 1646 QRGDGGSGLNMLXXXXXXXXXXLPMXXXXXXXXXXXXXXXXXXXXPP-TDLEMVVPAHAV 1822
             R + GSGL +           LPM                    PP + LEM+VPA+AV
Sbjct: 506  -RAESGSGLGLFSSSSLYGYGSLPMGENSYGSLASYSLSKLYEGLPPPSTLEMLVPANAV 564

Query: 1823 GKVMGKGGANIDNIRKISGADVEISQSKSSRGDRVALISGTPEQKRAAENLIQAFIMST 1999
            GKV+GKGGANI NIRKISGA +EIS +KS+RGDR+A ISG PEQK+AAENLIQAFIM+T
Sbjct: 565  GKVIGKGGANIANIRKISGAMIEISDAKSARGDRIAYISGKPEQKQAAENLIQAFIMAT 623



 Score = 80.5 bits (197), Expect = 3e-12
 Identities = 77/317 (24%), Positives = 136/317 (42%), Gaps = 5/317 (1%)
 Frame = +2

Query: 191  VVYRILCPDRVIGSVIGKSGKVINTIRQDSRAKVKVVDPFPGAKDRVLTIYCYXXXXXXX 370
            ++ R+LCP   IG VIGK G  I +IRQ S A+++V D      + ++T+          
Sbjct: 306  LIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRDECIITVIATESPDDLK 365

Query: 371  XXXXXXXXXXPLCAAQEALLMVHTVISNAVASLGDSHNKDSDKEECQILVPSSQSANIIG 550
                          A EA+L++           G  +++D+D    + LVPS     IIG
Sbjct: 366  SM------------AVEAILLLQ----------GKINDEDNDIVGIRFLVPSKVIGCIIG 403

Query: 551  KSGSTIKKLRGKTRTNIRVTSKDASDPAHSCAMHFDNFIQITGESEAVKKALFAISAIMY 730
            KSG+ + ++R +T  ++ ++  D       CA   D  +++ GE  +V+ AL  I   + 
Sbjct: 404  KSGAIVNEIRKRTNADVCISKVDKL----KCADSNDELVEVAGEVGSVRDALVQIVLRLR 459

Query: 731  KFGPKE-DISLETTVQXXXXXXXXXXXXXXYPAAGLYP----GLDSIVNSRSLPSILSAT 895
                KE D  L ++V                    + P    G D    S S   + S++
Sbjct: 460  DDVLKEKDGGLNSSVGTDSVYPVHAGISIPSILPSVPPVAPMGYDQRAESGSGLGLFSSS 519

Query: 896  HVPELSHYADAGHTWXXXXXXXXXXXXXXXASRSEELIIKVLCSSSKIGRVIGKGGASIK 1075
             +          +++                  S    +++L  ++ +G+VIGKGGA+I 
Sbjct: 520  SLYGYGSLPMGENSYGSLASYSLSKLYEGLPPPS---TLEMLVPANAVGKVIGKGGANIA 576

Query: 1076 SVRQTSGARVDVDDKKT 1126
            ++R+ SGA +++ D K+
Sbjct: 577  NIRKISGAMIEISDAKS 593


>ref|XP_003593895.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
            gi|357447243|ref|XP_003593897.1| Heterogeneous nuclear
            ribonucleoprotein K [Medicago truncatula]
            gi|355482943|gb|AES64146.1| Heterogeneous nuclear
            ribonucleoprotein K [Medicago truncatula]
            gi|355482945|gb|AES64148.1| Heterogeneous nuclear
            ribonucleoprotein K [Medicago truncatula]
          Length = 631

 Score =  433 bits (1113), Expect = e-118
 Identities = 229/403 (56%), Positives = 286/403 (70%), Gaps = 4/403 (0%)
 Frame = +2

Query: 74   MVEKGKRSHSRSEKYYDG---DSRNPKRRANDRDEKVHNDELVVYRILCPDRVIGSVIGK 244
            M E GKR+  + +    G   D++N KRR NDRDE+    EL+ YRILCP+ VIGSVIGK
Sbjct: 1    MGENGKRNRQQRDGDRGGRNWDNKNQKRRVNDRDER-DKGELIAYRILCPNEVIGSVIGK 59

Query: 245  SGKVINTIRQDSRAKVKVVDPFPGAKDRVLTIYCYXXXXXXXXXXXXXXXXXPLCAAQEA 424
            +GKVIN+IRQ+SRAKVKVVDPFPGAK RV+TI+C+                 PLCAAQ+A
Sbjct: 60   NGKVINSIRQESRAKVKVVDPFPGAKHRVITIFCHVKNKEEIEIEDEFDNEKPLCAAQDA 119

Query: 425  LLMVHTVISNAVASLGDSHNKDSDKEECQILVPSSQSANIIGKSGSTIKKLRGKTRTNIR 604
            L+ VH+ ISN++ + GDS  K  +K+ECQILVPSSQSA +IGK+G+TIK+LR KTRTNI+
Sbjct: 120  LIKVHSAISNSIETAGDSEKKRKNKDECQILVPSSQSAILIGKAGATIKQLRVKTRTNIK 179

Query: 605  VTSKDASDPAHSCAMHFDNFIQITGESEAVKKALFAISAIMYKFGPKEDISLETTVQXXX 784
            V  KDA+DP HSCAM FDNF+ + GESEAVK+ALFA+S IMYKF PKEDI L+TTV    
Sbjct: 180  VVPKDAADPEHSCAMEFDNFV-LVGESEAVKRALFAVSTIMYKFSPKEDIPLDTTVPETP 238

Query: 785  XXXXXXXXXXXYPAAGLYPGLDSIVNSRSLPSILSATHVPEL-SHYADAGHTWXXXXXXX 961
                       YP  GLYP  D IV  RS P ++ AT + +L   YAD G+TW       
Sbjct: 239  HSIIIPSELPIYPPGGLYPASDPIVQPRSFPQLIGATTMQDLHGGYADTGNTWPLYSSPL 298

Query: 962  XXXXXXXXASRSEELIIKVLCSSSKIGRVIGKGGASIKSVRQTSGARVDVDDKKTDNNEC 1141
                    AS+SEELI+++LC S KIG++IGKGG +IK +RQ SGAR++VDD K  ++EC
Sbjct: 299  PVVSSLG-ASQSEELIVRMLCPSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDEC 357

Query: 1142 TITITSTEKLDDMKSMSVEAVLLLQEKINDEEDDTISIRLLIP 1270
             ITIT+TE   D+KS++VEAVLLLQEKINDE+D  +SIRLL+P
Sbjct: 358  LITITATESTSDLKSVAVEAVLLLQEKINDEDDAPVSIRLLVP 400



 Score =  127 bits (320), Expect = 2e-26
 Identities = 84/180 (46%), Positives = 101/180 (56%), Gaps = 2/180 (1%)
 Frame = +2

Query: 1466 RDALVQIXXXXXXXXXXXXEGNRNPSDGVGLGSLYPGSASHSMPQVLPGIPPVGHT-GYE 1642
            RDAL+QI            + + N    +G  SLY  S+  S P +L  IP       Y+
Sbjct: 454  RDALIQIVLRLREDVLKNKDIDHNRH--IGSESLYASSSVLSAPPMLSSIPATAPALAYD 511

Query: 1643 QQRGDG-GSGLNMLXXXXXXXXXXLPMXXXXXXXXXXXXXXXXXXXXPPTDLEMVVPAHA 1819
            Q+ G G G G++            +                      P + LEMVVPA+A
Sbjct: 512  QRTGSGTGLGMHSSRSHYGYDSYSMEDNGYGSMSSYATNLYEGHRLPPLSTLEMVVPANA 571

Query: 1820 VGKVMGKGGANIDNIRKISGADVEISQSKSSRGDRVALISGTPEQKRAAENLIQAFIMST 1999
            VGKVMGKGGAN+ NIRKISGA VEIS+SKS RGDRVALISGT E+KRAAENLIQAFIM+T
Sbjct: 572  VGKVMGKGGANLANIRKISGATVEISESKSYRGDRVALISGTSEEKRAAENLIQAFIMAT 631



 Score = 64.7 bits (156), Expect = 2e-07
 Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 1/180 (0%)
 Frame = +2

Query: 179 NDELVVYRILCPDRVIGSVIGKSGKVINTIRQDSRAKVKVVDPFPGAKDRVLTIYCYXXX 358
           ++EL+V R+LCP   IG +IGK G  I  +RQ S A+++V D      + ++TI      
Sbjct: 309 SEELIV-RMLCPSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDECLITI------ 361

Query: 359 XXXXXXXXXXXXXXPLCAAQEALLMVHTVISNAVASLGDSHNKDSDKE-ECQILVPSSQS 535
                             A E+   + +V   AV  L +  N + D     ++LVPS   
Sbjct: 362 -----------------TATESTSDLKSVAVEAVLLLQEKINDEDDAPVSIRLLVPSKVI 404

Query: 536 ANIIGKSGSTIKKLRGKTRTNIRVTSKDASDPAHSCAMHFDNFIQITGESEAVKKALFAI 715
             IIG+SG+ I ++R +T+ +I+++   ++ P +  A   D  +++ GE + V+ AL  I
Sbjct: 405 GCIIGRSGAIINEIRKRTKADIQISR--SNKPKY--ADDNDELVEVVGEVDCVRDALIQI 460