BLASTX nr result

ID: Cnidium21_contig00008841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008841
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279552.1| PREDICTED: nuclear pore complex protein Nup5...   155   8e-67
emb|CBI27624.3| unnamed protein product [Vitis vinifera]              155   8e-67
ref|XP_002514932.1| conserved hypothetical protein [Ricinus comm...   153   1e-66
ref|XP_002314540.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-62
ref|XP_002311716.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-60

>ref|XP_002279552.1| PREDICTED: nuclear pore complex protein Nup54-like [Vitis vinifera]
          Length = 371

 Score =  155 bits (393), Expect(2) = 8e-67
 Identities = 77/91 (84%), Positives = 88/91 (96%)
 Frame = -2

Query: 544 DLSQRLKLQDEILVSDADRLRITQSNVKVLQRHFQADTIPRIERMRQKEHGIQRRLLRVM 365
           DLSQRLKLQDE+++SDA+RLR+TQSNVK+LQRHFQADT+P I+RMRQKE G+QRRLLRVM
Sbjct: 192 DLSQRLKLQDEVILSDAERLRMTQSNVKLLQRHFQADTLPWIQRMRQKEQGLQRRLLRVM 251

Query: 364 RMVEALEGKGFRLPLMKGEVELAEKLAAITR 272
           R+VEALEGKG+RLPLMKGEVEL EKLAAITR
Sbjct: 252 RIVEALEGKGYRLPLMKGEVELVEKLAAITR 282



 Score =  123 bits (309), Expect(2) = 8e-67
 Identities = 65/79 (82%), Positives = 73/79 (92%), Gaps = 2/79 (2%)
 Frame = -3

Query: 231 LKGSGAELSRRVQNLRTLARVQANDLGG--SVFLPGSTKIHEQSLASMQEVLQQQTEAIA 58
           LKGSGAELSRRVQNL T++RVQAN +GG  SV+LPGSTKIHEQSLA MQEVLQQQTEAIA
Sbjct: 284 LKGSGAELSRRVQNLLTISRVQANAIGGGGSVYLPGSTKIHEQSLADMQEVLQQQTEAIA 343

Query: 57  RMGSVLKRDLRDMEIMMAE 1
           R+G+VLKRD RDMEI+M+E
Sbjct: 344 RLGNVLKRDSRDMEIIMSE 362


>emb|CBI27624.3| unnamed protein product [Vitis vinifera]
          Length = 265

 Score =  155 bits (393), Expect(2) = 8e-67
 Identities = 77/91 (84%), Positives = 88/91 (96%)
 Frame = -2

Query: 544 DLSQRLKLQDEILVSDADRLRITQSNVKVLQRHFQADTIPRIERMRQKEHGIQRRLLRVM 365
           DLSQRLKLQDE+++SDA+RLR+TQSNVK+LQRHFQADT+P I+RMRQKE G+QRRLLRVM
Sbjct: 86  DLSQRLKLQDEVILSDAERLRMTQSNVKLLQRHFQADTLPWIQRMRQKEQGLQRRLLRVM 145

Query: 364 RMVEALEGKGFRLPLMKGEVELAEKLAAITR 272
           R+VEALEGKG+RLPLMKGEVEL EKLAAITR
Sbjct: 146 RIVEALEGKGYRLPLMKGEVELVEKLAAITR 176



 Score =  123 bits (309), Expect(2) = 8e-67
 Identities = 65/79 (82%), Positives = 73/79 (92%), Gaps = 2/79 (2%)
 Frame = -3

Query: 231 LKGSGAELSRRVQNLRTLARVQANDLGG--SVFLPGSTKIHEQSLASMQEVLQQQTEAIA 58
           LKGSGAELSRRVQNL T++RVQAN +GG  SV+LPGSTKIHEQSLA MQEVLQQQTEAIA
Sbjct: 178 LKGSGAELSRRVQNLLTISRVQANAIGGGGSVYLPGSTKIHEQSLADMQEVLQQQTEAIA 237

Query: 57  RMGSVLKRDLRDMEIMMAE 1
           R+G+VLKRD RDMEI+M+E
Sbjct: 238 RLGNVLKRDSRDMEIIMSE 256


>ref|XP_002514932.1| conserved hypothetical protein [Ricinus communis]
           gi|223545983|gb|EEF47486.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score =  153 bits (386), Expect(2) = 1e-66
 Identities = 74/91 (81%), Positives = 87/91 (95%)
 Frame = -2

Query: 544 DLSQRLKLQDEILVSDADRLRITQSNVKVLQRHFQADTIPRIERMRQKEHGIQRRLLRVM 365
           DLS RLKLQDE++VSDA+RLR+TQSNVK+LQRHFQA+T+PRIERMRQKE  +QRRLLR+M
Sbjct: 216 DLSNRLKLQDEVIVSDAERLRMTQSNVKMLQRHFQAETLPRIERMRQKEQSLQRRLLRIM 275

Query: 364 RMVEALEGKGFRLPLMKGEVELAEKLAAITR 272
           R++EALEGKG+R+PLMKGE ELAEKLAAITR
Sbjct: 276 RIMEALEGKGYRMPLMKGETELAEKLAAITR 306



 Score =  125 bits (315), Expect(2) = 1e-66
 Identities = 65/79 (82%), Positives = 74/79 (93%), Gaps = 2/79 (2%)
 Frame = -3

Query: 231 LKGSGAELSRRVQNLRTLARVQANDLG--GSVFLPGSTKIHEQSLASMQEVLQQQTEAIA 58
           LKGSGAELSRRVQNL T++R+QAN LG  GS++LPGSTKIHEQSLA MQEVLQQQTEAIA
Sbjct: 308 LKGSGAELSRRVQNLLTVSRIQANALGAGGSIYLPGSTKIHEQSLADMQEVLQQQTEAIA 367

Query: 57  RMGSVLKRDLRDMEIMMAE 1
           R+G+VLKRD+RDMEI+MAE
Sbjct: 368 RLGNVLKRDMRDMEIIMAE 386


>ref|XP_002314540.1| predicted protein [Populus trichocarpa] gi|222863580|gb|EEF00711.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  143 bits (360), Expect(2) = 1e-62
 Identities = 72/91 (79%), Positives = 82/91 (90%)
 Frame = -2

Query: 544 DLSQRLKLQDEILVSDADRLRITQSNVKVLQRHFQADTIPRIERMRQKEHGIQRRLLRVM 365
           DLS RLKLQDE++VSDA+RLR+TQSNVK+LQRHFQA+T+P IERMRQKE  +QRRLLRVM
Sbjct: 98  DLSNRLKLQDEVIVSDAERLRMTQSNVKMLQRHFQAETLPWIERMRQKEQSLQRRLLRVM 157

Query: 364 RMVEALEGKGFRLPLMKGEVELAEKLAAITR 272
           R++EALEGKG RLPL KGE ELAEKL AI R
Sbjct: 158 RIMEALEGKGCRLPLTKGEAELAEKLVAIIR 188



 Score =  122 bits (305), Expect(2) = 1e-62
 Identities = 63/79 (79%), Positives = 72/79 (91%), Gaps = 2/79 (2%)
 Frame = -3

Query: 231 LKGSGAELSRRVQNLRTLARVQANDLG--GSVFLPGSTKIHEQSLASMQEVLQQQTEAIA 58
           LKGSGAE SRRV NL T++RVQAN +G  GS++LPGSTKIHE+SLA MQEVLQQQTEAIA
Sbjct: 190 LKGSGAEFSRRVHNLLTVSRVQANGIGAGGSLYLPGSTKIHEESLADMQEVLQQQTEAIA 249

Query: 57  RMGSVLKRDLRDMEIMMAE 1
           R+G+VLKRD+RDMEIMMAE
Sbjct: 250 RLGNVLKRDIRDMEIMMAE 268


>ref|XP_002311716.1| predicted protein [Populus trichocarpa] gi|222851536|gb|EEE89083.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score =  134 bits (337), Expect(2) = 1e-60
 Identities = 70/92 (76%), Positives = 79/92 (85%), Gaps = 1/92 (1%)
 Frame = -2

Query: 544 DLSQRLKLQDEILVSDADRLRITQSNVK-VLQRHFQADTIPRIERMRQKEHGIQRRLLRV 368
           DLS RLKLQDE++VSDA+RLR+TQSN+   LQRHFQA  +PRIERMRQKE  +QR LLRV
Sbjct: 193 DLSHRLKLQDEVIVSDAERLRMTQSNINGTLQRHFQAVALPRIERMRQKEQCLQRHLLRV 252

Query: 367 MRMVEALEGKGFRLPLMKGEVELAEKLAAITR 272
           MR++EALEGKGFRLPL K E ELAEKLAAI R
Sbjct: 253 MRIMEALEGKGFRLPLTKAEAELAEKLAAIIR 284



 Score =  124 bits (312), Expect(2) = 1e-60
 Identities = 65/79 (82%), Positives = 73/79 (92%), Gaps = 2/79 (2%)
 Frame = -3

Query: 231 LKGSGAELSRRVQNLRTLARVQANDLG--GSVFLPGSTKIHEQSLASMQEVLQQQTEAIA 58
           LKGSGAELSRRVQNL T++RVQ N +G  GS++LPGSTKIHEQSLA MQEVLQQQTEAIA
Sbjct: 286 LKGSGAELSRRVQNLLTVSRVQENGIGAGGSLYLPGSTKIHEQSLADMQEVLQQQTEAIA 345

Query: 57  RMGSVLKRDLRDMEIMMAE 1
           R+G+VLKRD+RDMEIMMAE
Sbjct: 346 RLGNVLKRDIRDMEIMMAE 364


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