BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008833
         (1197 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003568202.1| PREDICTED: tubulin beta-5 chain-like [Brachy...   399   e-108
sp|P25862.1|TBB1_AVESA RecName: Full=Tubulin beta-1 chain; AltNa...   398   e-108
dbj|BAC42563.1| putative tubulin beta-6 chain [Arabidopsis thali...   398   e-108
sp|P29502.1|TBB3_PEA RecName: Full=Tubulin beta-3 chain; AltName...   398   e-108
gb|AFC88847.1| putative beta-5 tubulin, partial [Tetragonia tetr...   398   e-108

>ref|XP_003568202.1| PREDICTED: tubulin beta-5 chain-like [Brachypodium distachyon]
          Length = 447

 Score =  399 bits (1024), Expect = e-108
 Identities = 194/195 (99%), Positives = 195/195 (100%)
 Frame = -2

Query: 587 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT 408
           YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT
Sbjct: 159 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT 218

Query: 407 TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS 228
           TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS
Sbjct: 219 TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS 278

Query: 227 QQYRTLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNS 48
           QQYR+LTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNS
Sbjct: 279 QQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNS 338

Query: 47  SYFVEWIPNNVKSSV 3
           SYFVEWIPNNVKSSV
Sbjct: 339 SYFVEWIPNNVKSSV 353



 Score =  234 bits (596), Expect = 4e-59
 Identities = 116/155 (74%), Positives = 119/155 (76%)
 Frame = -3

Query: 1186 MREILHVQGGQCGNQIGSKFWEVVCDEHGIDPTGKYVGKSYLQLERVNVYYNEASCGRFV 1007
            MREILH+QGGQCGNQIGSKFWEVVCDEHGIDPTG+YVG S LQLERVNVYYNEASCGRFV
Sbjct: 1    MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60

Query: 1006 PRAILMDLEPGTMDSVRTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNWAKG 827
            PRA+LMDLEPGTMDSVRTG                                  GNNWAKG
Sbjct: 61   PRAVLMDLEPGTMDSVRTG----------------PYGQIFRPDNFVFGQSGAGNNWAKG 104

Query: 826  HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSL 722
            HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSL
Sbjct: 105  HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSL 139


>sp|P25862.1|TBB1_AVESA RecName: Full=Tubulin beta-1 chain; AltName: Full=Beta-1-tubulin
           gi|16122|emb|CAA38630.1| beta-tubulin [Avena sativa]
          Length = 386

 Score =  398 bits (1023), Expect = e-108
 Identities = 194/195 (99%), Positives = 194/195 (99%)
 Frame = -2

Query: 587 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT 408
           YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT
Sbjct: 97  YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT 156

Query: 407 TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS 228
           TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS
Sbjct: 157 TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS 216

Query: 227 QQYRTLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNS 48
           QQYR LTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNS
Sbjct: 217 QQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNS 276

Query: 47  SYFVEWIPNNVKSSV 3
           SYFVEWIPNNVKSSV
Sbjct: 277 SYFVEWIPNNVKSSV 291



 Score =  109 bits (272), Expect = 2e-21
 Identities = 58/93 (62%), Positives = 59/93 (63%)
 Frame = -3

Query: 1000 AILMDLEPGTMDSVRTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNWAKGHY 821
            A+LMDLEPGTMDSVRTG                                  GNNWAKGHY
Sbjct: 1    AVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGA----------------GNNWAKGHY 44

Query: 820  TEGAELIDSVLDVVRKEAENCDCLQGFQVCHSL 722
            TEGAELIDSVLDVVRKEAENCDCLQGFQVCHSL
Sbjct: 45   TEGAELIDSVLDVVRKEAENCDCLQGFQVCHSL 77


>dbj|BAC42563.1| putative tubulin beta-6 chain [Arabidopsis thaliana]
          Length = 449

 Score =  398 bits (1023), Expect = e-108
 Identities = 194/195 (99%), Positives = 194/195 (99%)
 Frame = -2

Query: 587 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT 408
           YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT
Sbjct: 159 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT 218

Query: 407 TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS 228
           TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS
Sbjct: 219 TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS 278

Query: 227 QQYRTLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNS 48
           QQYR LTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNS
Sbjct: 279 QQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNS 338

Query: 47  SYFVEWIPNNVKSSV 3
           SYFVEWIPNNVKSSV
Sbjct: 339 SYFVEWIPNNVKSSV 353



 Score =  229 bits (584), Expect = 1e-57
 Identities = 113/155 (72%), Positives = 119/155 (76%)
 Frame = -3

Query: 1186 MREILHVQGGQCGNQIGSKFWEVVCDEHGIDPTGKYVGKSYLQLERVNVYYNEASCGRFV 1007
            MREILH+QGGQCGNQIGSKFWEVVCDEHGIDPTG+YVG S LQLERVNVYYNEASCGR+V
Sbjct: 1    MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60

Query: 1006 PRAILMDLEPGTMDSVRTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNWAKG 827
            PRAILMDLEPGTMD+VRTG                                  GNNWAKG
Sbjct: 61   PRAILMDLEPGTMDNVRTG----------------PYGQIFRPDNFVFGQSGAGNNWAKG 104

Query: 826  HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSL 722
            HYTEGAELID+VLDVVRKEAE+CDCLQGFQVCHSL
Sbjct: 105  HYTEGAELIDAVLDVVRKEAEDCDCLQGFQVCHSL 139


>sp|P29502.1|TBB3_PEA RecName: Full=Tubulin beta-3 chain; AltName: Full=Beta-3-tubulin
           gi|388255|emb|CAA38615.1| beta-tubulin 3 [Pisum sativum]
          Length = 440

 Score =  398 bits (1023), Expect = e-108
 Identities = 194/195 (99%), Positives = 194/195 (99%)
 Frame = -2

Query: 587 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT 408
           YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT
Sbjct: 150 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT 209

Query: 407 TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS 228
           TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS
Sbjct: 210 TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS 269

Query: 227 QQYRTLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNS 48
           QQYR LTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNS
Sbjct: 270 QQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNS 329

Query: 47  SYFVEWIPNNVKSSV 3
           SYFVEWIPNNVKSSV
Sbjct: 330 SYFVEWIPNNVKSSV 344



 Score =  217 bits (553), Expect = 4e-54
 Identities = 109/146 (74%), Positives = 110/146 (75%)
 Frame = -3

Query: 1159 GQCGNQIGSKFWEVVCDEHGIDPTGKYVGKSYLQLERVNVYYNEASCGRFVPRAILMDLE 980
            GQCGNQIGSKFWEVVCDEHGIDPTG+YVG S LQLERVNVYYNEASCGRFVPRAILMDLE
Sbjct: 1    GQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRFVPRAILMDLE 60

Query: 979  PGTMDSVRTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNWAKGHYTEGAELI 800
            PGTMDSVRTG                                  GNNWAKGHYTEGAELI
Sbjct: 61   PGTMDSVRTG----------------PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELI 104

Query: 799  DSVLDVVRKEAENCDCLQGFQVCHSL 722
            DSVLDVVRKEAENCDCLQGFQVCHSL
Sbjct: 105  DSVLDVVRKEAENCDCLQGFQVCHSL 130


>gb|AFC88847.1| putative beta-5 tubulin, partial [Tetragonia tetragonioides]
          Length = 355

 Score =  398 bits (1023), Expect = e-108
 Identities = 194/195 (99%), Positives = 194/195 (99%)
 Frame = -2

Query: 587 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT 408
           YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT
Sbjct: 134 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT 193

Query: 407 TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS 228
           TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS
Sbjct: 194 TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS 253

Query: 227 QQYRTLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNS 48
           QQYR LTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNS
Sbjct: 254 QQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNS 313

Query: 47  SYFVEWIPNNVKSSV 3
           SYFVEWIPNNVKSSV
Sbjct: 314 SYFVEWIPNNVKSSV 328



 Score =  179 bits (455), Expect = 9e-43
 Identities = 92/130 (70%), Positives = 94/130 (72%)
 Frame = -3

Query: 1111 DEHGIDPTGKYVGKSYLQLERVNVYYNEASCGRFVPRAILMDLEPGTMDSVRTGXXXXXX 932
            +EHGIDPTGKYVG S LQLERVNVYYNEASCGRFVPRA+LMDLEPGTMDSVRTG      
Sbjct: 1    EEHGIDPTGKYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTG------ 54

Query: 931  XXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNWAKGHYTEGAELIDSVLDVVRKEAENCDC 752
                                        GNNWAKGHYTEGAELIDSVLDVVRKEAENCDC
Sbjct: 55   ----------PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDC 104

Query: 751  LQGFQVCHSL 722
            LQGFQVCHSL
Sbjct: 105  LQGFQVCHSL 114