BLASTX nr result

ID: Cnidium21_contig00008831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008831
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326304.1| predicted protein [Populus trichocarpa] gi|2...    70   3e-10
ref|XP_002877267.1| hypothetical protein ARALYDRAFT_905411 [Arab...    65   2e-08
ref|NP_189897.1| uncharacterized protein [Arabidopsis thaliana] ...    63   7e-08
ref|XP_002540459.1| conserved hypothetical protein [Ricinus comm...    59   1e-06
gb|AAM63728.1| unknown [Arabidopsis thaliana]                          59   1e-06

>ref|XP_002326304.1| predicted protein [Populus trichocarpa] gi|222833497|gb|EEE71974.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 55/168 (32%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
 Frame = +3

Query: 126 LSFDYV---LTIILNNVWTCMAILTAGAISFIWTXXXXXXXXPRFEQASSPSVSSQELNM 296
           L FDYV   +  I+NN+WT +A++TA A+SF W            E + SP    +++  
Sbjct: 11  LVFDYVNLGILTIINNLWTWVAVITA-AVSF-WRIRAAGAVKTLAEPSPSPDYIERKIT- 67

Query: 297 VHSCSPQLFEPVPKNVISTPALDCSDAVIKTGKFAVYFYDDEVHEEDYFRGNVVCAETEY 476
                P +FE               D   K GKF VY+Y D+  + +   GN+     E 
Sbjct: 68  ----DPSVFE---------------DNGAKKGKFVVYYYQDDDRQNE---GNIDGGGEEE 105

Query: 477 DDVIDGVTFCCRELNM------------GWYRYLDLTVFNGNVVRLWD 584
             V+     C  E+ +            GWYR  DLTV NGNVVRLWD
Sbjct: 106 LTVLGEWDRCGEEITLWERMLRVRMGEYGWYRCQDLTVINGNVVRLWD 153


>ref|XP_002877267.1| hypothetical protein ARALYDRAFT_905411 [Arabidopsis lyrata subsp.
           lyrata] gi|297323105|gb|EFH53526.1| hypothetical protein
           ARALYDRAFT_905411 [Arabidopsis lyrata subsp. lyrata]
          Length = 189

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 61/168 (36%), Positives = 80/168 (47%), Gaps = 12/168 (7%)
 Frame = +3

Query: 123 LLSFDYVLTIILNNVWTCMAILTAGAISFIWTXXXXXXXXPRFEQASSPSVSSQELNMVH 302
           +L+FDYV   + NN+WT +A++TA A+SF W                    S +E     
Sbjct: 10  VLAFDYV-NFVFNNLWTWIAVVTA-AVSF-WRIRATTTSGGGGRDDGFIDESPREPPKPQ 66

Query: 303 SCSPQLF-EPVPKNVISTPALD-----CSDAVIKTGKFAVYFYD--DEVHEEDYFRGNVV 458
           +    L  E  P +V  T   D     C+D V K GK  VY+ +  D   EED     VV
Sbjct: 67  ATKAALVVETKPPSVKVTETEDWSLLLCNDGVTK-GKLTVYYEEMIDGEREEDDGETTVV 125

Query: 459 C----AETEYDDVIDGVTFCCRELNMGWYRYLDLTVFNGNVVRLWD*N 590
                A  E+ +  + V    R  + GWYRY+DLTV NGNVVRLWD N
Sbjct: 126 KYGGGASGEWWERWERVVKM-RNGDEGWYRYVDLTVINGNVVRLWDAN 172


>ref|NP_189897.1| uncharacterized protein [Arabidopsis thaliana]
           gi|7529252|emb|CAB86482.1| putative protein [Arabidopsis
           thaliana] gi|46518379|gb|AAS99671.1| At3g43110
           [Arabidopsis thaliana] gi|48310350|gb|AAT41803.1|
           At3g43110 [Arabidopsis thaliana]
           gi|332644244|gb|AEE77765.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 191

 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 57/182 (31%), Positives = 81/182 (44%), Gaps = 26/182 (14%)
 Frame = +3

Query: 123 LLSFDYVLTIILNNVWTCMAILTAGAISFIWTXXXXXXXXPRFEQASSPSVSSQELNMVH 302
           +L+FDYV   + NN+WT +A++TA A+SF W          R    ++ S   ++  ++ 
Sbjct: 10  VLAFDYV-NFVFNNLWTWIAVVTA-AVSF-WRI--------RATTTTTTSGGGRDNGLID 58

Query: 303 SC-----SPQ------LFEPVPKNVISTPALD-----CSDAVIKTGKFAVYFYDDEVHEE 434
                   PQ      L E  P  V  T   D     C D V K GK  VY+ ++   E 
Sbjct: 59  ESFLEPPKPQATKAALLMETKPPRVKVTETEDWSLLLCKDGVTK-GKLTVYYEEEIDGER 117

Query: 435 DYFRGNVVCAE----------TEYDDVIDGVTFCCRELNMGWYRYLDLTVFNGNVVRLWD 584
           +   G     +            ++ V+       R  + GWYRY+DLTV NGNVVRLWD
Sbjct: 118 EEDDGETTAVKYGGGESGEWWERWERVVK-----MRNGDEGWYRYVDLTVINGNVVRLWD 172

Query: 585 *N 590
            N
Sbjct: 173 AN 174


>ref|XP_002540459.1| conserved hypothetical protein [Ricinus communis]
           gi|223495580|gb|EEF21924.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 194

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 53/178 (29%), Positives = 76/178 (42%), Gaps = 25/178 (14%)
 Frame = +3

Query: 126 LSFDYV---LTIILNNVWTCMAILTAGAISFIWTXXXXXXXXPRFEQASSPSVSSQELNM 296
           L+FDYV   +  ++NN+WT +A+LTA A+SF W          +    SS ++     N 
Sbjct: 11  LAFDYVSFGIFTVVNNLWTWVALLTA-AVSF-WRIKTAGLKSEQPRVLSS-AICIDTHNN 67

Query: 297 VHSCSPQLFEPVPKNVISTPALDCSDAV----------------IKTGKFAVYFYDDEVH 428
                P+  +P       +P L  SD                  +  GKF +Y+  D   
Sbjct: 68  NDEARPETSQPESP---PSPTLSFSDTASSSSLSSRLSIFENDGVTKGKFVMYYAGDRES 124

Query: 429 EEDYFRGNVV------CAETEYDDVIDGVTFCCRELNMGWYRYLDLTVFNGNVVRLWD 584
           + +             C  +E  +  + +    R   MGWYR  DLTVFNGNVVRLWD
Sbjct: 125 DGNCDGDGCTVVGVWGCGGSE--EWPERIVLRTRMSEMGWYRNQDLTVFNGNVVRLWD 180


>gb|AAM63728.1| unknown [Arabidopsis thaliana]
          Length = 193

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 54/178 (30%), Positives = 77/178 (43%), Gaps = 21/178 (11%)
 Frame = +3

Query: 126 LSFDYV---LTIILNNVWTCMAILTAGAISF----IWTXXXXXXXXPRFEQASSPSVSSQ 284
           L+F+Y    +  ++NNVWT +A++TA A+SF    + T            +  + S S  
Sbjct: 11  LAFEYASFGVFAVVNNVWTWIAVVTA-AVSFWRIRVTTIGVGDGHACVLIEELTGSKSEN 69

Query: 285 ELNMVHSCS-----PQLFEPVPKNVISTPALDCSDAVIKTGKFAVYFYDDEVHEEDYFRG 449
           E   +   S      +    V + V  T  L C D V K      Y  D +V       G
Sbjct: 70  ESGRLEPKSITGPVKETVARVKETVTKTEPLICDDGVTKRKLTMYYEVDVDVDGGRCVNG 129

Query: 450 NVVCAE---------TEYDDVIDGVTFCCRELNMGWYRYLDLTVFNGNVVRLWD*NNT 596
           ++              ++ +  DGV    R  +  WYRY+DLTV NGNVVRLWD N T
Sbjct: 130 DLTAVSYGGGLGNCGGDWWEKWDGVV-RMRNGDDSWYRYVDLTVINGNVVRLWDDNKT 186


Top