BLASTX nr result

ID: Cnidium21_contig00008826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008826
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17830.3| unnamed protein product [Vitis vinifera]              337   3e-90
emb|CAB52470.1| putative protein [Arabidopsis thaliana] gi|72699...   335   1e-89
ref|NP_567843.1| Yip1 integral membrane domain-containing protei...   335   1e-89
ref|XP_002271751.1| PREDICTED: protein YIPF6 [Vitis vinifera]         334   2e-89
ref|XP_002867359.1| integral membrane Yip1 family protein [Arabi...   330   3e-88

>emb|CBI17830.3| unnamed protein product [Vitis vinifera]
          Length = 265

 Score =  337 bits (863), Expect = 3e-90
 Identities = 172/221 (77%), Positives = 185/221 (83%)
 Frame = -2

Query: 941 VSSSPFIPSNIPLPSTNKPTSVPQAXXXXXPSNNIGPTGFGSGPNTLTEPVWNTVKRDLS 762
           VSS+PFI SNIP P+ NKP  VP           + P GFGS  NTLTEPVW+TVKRDLS
Sbjct: 50  VSSTPFIQSNIPPPTYNKPPVVPAVVPAA-----VPPPGFGSQANTLTEPVWDTVKRDLS 104

Query: 761 RIVSNLKLVVFPNPYREDPGKAMRDWDLWGPFFFIVFLGLTLSWSASVKKSEXXXXXXXX 582
           RIVSNLKLVVFPNPYREDPGKA+RDWDLWGPFFFIVFLGLTLSWSASVKKSE        
Sbjct: 105 RIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFAL 164

Query: 581 XXXXXVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVAMKLVVVGVTLA 402
                +ILTLNVLLLGGHIIFFQS+SLLGYCLFPLDVGALICMLKDNV +K++VV VTLA
Sbjct: 165 LAAGAIILTLNVLLLGGHIIFFQSISLLGYCLFPLDVGALICMLKDNVIVKVIVVCVTLA 224

Query: 401 WSSWAAYPFMSTAVSPGRKALALYPVLLMYVSVGFLIIAIN 279
           WSSWAAYPFMS+AV+P RKALALYPVLLMYVSVGFLIIAI+
Sbjct: 225 WSSWAAYPFMSSAVNPRRKALALYPVLLMYVSVGFLIIAID 265


>emb|CAB52470.1| putative protein [Arabidopsis thaliana] gi|7269926|emb|CAB81019.1|
           putative protein [Arabidopsis thaliana]
          Length = 355

 Score =  335 bits (858), Expect = 1e-89
 Identities = 177/231 (76%), Positives = 187/231 (80%), Gaps = 10/231 (4%)
 Frame = -2

Query: 941 VSSSPFIPSNIP-LP-----STNKPTSVPQAXXXXXPSN----NIGPTGFGSGPNTLTEP 792
           VSSSPF+ SN+P LP     ST K   VP         N    +IG +GFGS PNTLTEP
Sbjct: 125 VSSSPFVQSNLPPLPPSSSSSTQKVMPVPAPPPLPSAGNEGNKSIGGSGFGSPPNTLTEP 184

Query: 791 VWNTVKRDLSRIVSNLKLVVFPNPYREDPGKAMRDWDLWGPFFFIVFLGLTLSWSASVKK 612
           VW+TVKRDLSRIVSNLKLVVFPNPYREDPGKA+RDWDLWGPFFFIVFLGLTLSWSASVKK
Sbjct: 185 VWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKK 244

Query: 611 SEXXXXXXXXXXXXXVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVAM 432
           SE             VILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGA+ICMLKDNV +
Sbjct: 245 SEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAVICMLKDNVIL 304

Query: 431 KLVVVGVTLAWSSWAAYPFMSTAVSPGRKALALYPVLLMYVSVGFLIIAIN 279
           K+VVV VTLAWSSWAAYPFMS AV+P RKALALYPV LMYVSVGFLIIAIN
Sbjct: 305 KMVVVSVTLAWSSWAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAIN 355


>ref|NP_567843.1| Yip1 integral membrane domain-containing protein [Arabidopsis
           thaliana] gi|15010748|gb|AAK74033.1| AT4g30260/F9N11_110
           [Arabidopsis thaliana] gi|15810091|gb|AAL06971.1|
           AT4g30260/F9N11_110 [Arabidopsis thaliana]
           gi|20260560|gb|AAM13178.1| putative protein [Arabidopsis
           thaliana] gi|332660344|gb|AEE85744.1| Yip1 integral
           membrane domain-containing protein [Arabidopsis
           thaliana]
          Length = 280

 Score =  335 bits (858), Expect = 1e-89
 Identities = 177/231 (76%), Positives = 187/231 (80%), Gaps = 10/231 (4%)
 Frame = -2

Query: 941 VSSSPFIPSNIP-LP-----STNKPTSVPQAXXXXXPSN----NIGPTGFGSGPNTLTEP 792
           VSSSPF+ SN+P LP     ST K   VP         N    +IG +GFGS PNTLTEP
Sbjct: 50  VSSSPFVQSNLPPLPPSSSSSTQKVMPVPAPPPLPSAGNEGNKSIGGSGFGSPPNTLTEP 109

Query: 791 VWNTVKRDLSRIVSNLKLVVFPNPYREDPGKAMRDWDLWGPFFFIVFLGLTLSWSASVKK 612
           VW+TVKRDLSRIVSNLKLVVFPNPYREDPGKA+RDWDLWGPFFFIVFLGLTLSWSASVKK
Sbjct: 110 VWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKK 169

Query: 611 SEXXXXXXXXXXXXXVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVAM 432
           SE             VILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGA+ICMLKDNV +
Sbjct: 170 SEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAVICMLKDNVIL 229

Query: 431 KLVVVGVTLAWSSWAAYPFMSTAVSPGRKALALYPVLLMYVSVGFLIIAIN 279
           K+VVV VTLAWSSWAAYPFMS AV+P RKALALYPV LMYVSVGFLIIAIN
Sbjct: 230 KMVVVSVTLAWSSWAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAIN 280


>ref|XP_002271751.1| PREDICTED: protein YIPF6 [Vitis vinifera]
          Length = 282

 Score =  334 bits (857), Expect = 2e-89
 Identities = 176/233 (75%), Positives = 190/233 (81%), Gaps = 12/233 (5%)
 Frame = -2

Query: 941 VSSSPFIPSNIPLPSTNKPTSVPQAXXXXXP------SNN------IGPTGFGSGPNTLT 798
           VSS+PFI SNIP P+ NKP  VP       P      SN+      IG +GFGS  NTLT
Sbjct: 50  VSSTPFIQSNIPPPTYNKPPVVPAVVPAAVPPPLPNTSNSSSTRPSIGASGFGSQANTLT 109

Query: 797 EPVWNTVKRDLSRIVSNLKLVVFPNPYREDPGKAMRDWDLWGPFFFIVFLGLTLSWSASV 618
           EPVW+TVKRDLSRIVSNLKLVVFPNPYREDPGKA+RDWDLWGPFFFIVFLGLTLSWSASV
Sbjct: 110 EPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASV 169

Query: 617 KKSEXXXXXXXXXXXXXVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNV 438
           KKSE             +ILTLNVLLLGGHIIFFQS+SLLGYCLFPLDVGALICMLKDNV
Sbjct: 170 KKSEVFAVAFALLAAGAIILTLNVLLLGGHIIFFQSISLLGYCLFPLDVGALICMLKDNV 229

Query: 437 AMKLVVVGVTLAWSSWAAYPFMSTAVSPGRKALALYPVLLMYVSVGFLIIAIN 279
            +K++VV VTLAWSSWAAYPFMS+AV+P RKALALYPVLLMYVSVGFLIIAI+
Sbjct: 230 IVKVIVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVLLMYVSVGFLIIAID 282


>ref|XP_002867359.1| integral membrane Yip1 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297313195|gb|EFH43618.1| integral membrane
           Yip1 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 283

 Score =  330 bits (846), Expect = 3e-88
 Identities = 173/234 (73%), Positives = 187/234 (79%), Gaps = 13/234 (5%)
 Frame = -2

Query: 941 VSSSPFIPSNIP-LPSTNK------PTSVPQAXXXXXPSNN------IGPTGFGSGPNTL 801
           VSSSPF+ SN+P LP ++       P   P        SN+      IG +GFGS PNTL
Sbjct: 50  VSSSPFVQSNLPPLPPSSSSSQKVMPVPAPPPLPSVGNSNSSEGNKSIGGSGFGSPPNTL 109

Query: 800 TEPVWNTVKRDLSRIVSNLKLVVFPNPYREDPGKAMRDWDLWGPFFFIVFLGLTLSWSAS 621
           TEPVW+TVKRDLSRIVSNLKLVVFPNPYREDPGKA+RDWDLWGPFFFIVFLGLTLSWSAS
Sbjct: 110 TEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSAS 169

Query: 620 VKKSEXXXXXXXXXXXXXVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDN 441
           VKKSE             VILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGA+ICMLKDN
Sbjct: 170 VKKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAVICMLKDN 229

Query: 440 VAMKLVVVGVTLAWSSWAAYPFMSTAVSPGRKALALYPVLLMYVSVGFLIIAIN 279
           V +K++VV VTLAWSSWAAYPFMS AV+P RKALALYPV LMYVSVGFLIIAI+
Sbjct: 230 VILKMIVVSVTLAWSSWAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID 283


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