BLASTX nr result

ID: Cnidium21_contig00008799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008799
         (3121 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleop...   251   9e-64
emb|CBI31404.3| unnamed protein product [Vitis vinifera]              249   3e-63
emb|CAN66927.1| hypothetical protein VITISV_011831 [Vitis vinifera]   248   9e-63
ref|XP_002315330.1| predicted protein [Populus trichocarpa] gi|2...   244   1e-61
ref|XP_004150370.1| PREDICTED: uncharacterized protein LOC101207...   236   2e-59

>ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Vitis vinifera]
          Length = 278

 Score =  251 bits (641), Expect = 9e-64
 Identities = 130/244 (53%), Positives = 143/244 (58%), Gaps = 1/244 (0%)
 Frame = +1

Query: 2149 QIMMERDTGRPRGFGFLTFADRRGMEDAIREMHGRELGDRAISVNKAQPKMGGDEAXXXX 2328
            QIM+ERDTGRPRGFGF+T+ADRRGMEDAIREMHGR+ GDR ISVNKAQPKMG D      
Sbjct: 37   QIMLERDTGRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISVNKAQPKMGEDPDHGYN 96

Query: 2329 XXXXXXXXXXXXXXXXXXXQDECFKCGRSGHWARDCPSAXXXXXXXXXXXXXXXXXXXXX 2508
                               QD+CFKCGR GHWARDCPS+                     
Sbjct: 97   GGYSSGGRGSYGGGDRSAGQDDCFKCGRPGHWARDCPSSGGGRGRGGAPFPSRSRFSGGR 156

Query: 2509 XXXXXXXXXXXXXXVXXXXXXXXXXXXXXEIRETKYGGRD-YVTDRYPPSTDRFVGDRYG 2685
                                         E R+ KYG RD YV DRY PS DRF GDRYG
Sbjct: 157  GDRFGGERDRYMED--RYDGGRYGDRDRFESRDNKYGTRDRYVNDRYAPSGDRFSGDRYG 214

Query: 2686 DSDRYPTNGYGKERLYERDGGPRRSSERYGGGGPARYEGKGYRDRAGPYDRPRRGGQPSS 2865
             SDRYP NGYGK+R Y+RD  PR   +RY GGG AR EG+ YR+R GPYDRP RGG+PSS
Sbjct: 215  GSDRYPQNGYGKDRGYDRDAAPRGGGDRYAGGGSARNEGRSYRNRPGPYDRPNRGGRPSS 274

Query: 2866 FDRY 2877
            FDRY
Sbjct: 275  FDRY 278


>emb|CBI31404.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score =  249 bits (636), Expect = 3e-63
 Identities = 129/243 (53%), Positives = 142/243 (58%), Gaps = 1/243 (0%)
 Frame = +1

Query: 2152 IMMERDTGRPRGFGFLTFADRRGMEDAIREMHGRELGDRAISVNKAQPKMGGDEAXXXXX 2331
            IM+ERDTGRPRGFGF+T+ADRRGMEDAIREMHGR+ GDR ISVNKAQPKMG D       
Sbjct: 54   IMLERDTGRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISVNKAQPKMGEDPDHGYNG 113

Query: 2332 XXXXXXXXXXXXXXXXXXQDECFKCGRSGHWARDCPSAXXXXXXXXXXXXXXXXXXXXXX 2511
                              QD+CFKCGR GHWARDCPS+                      
Sbjct: 114  GYSSGGRGSYGGGDRSAGQDDCFKCGRPGHWARDCPSSGGGRGRGGAPFPSRSRFSGGRG 173

Query: 2512 XXXXXXXXXXXXXVXXXXXXXXXXXXXXEIRETKYGGRD-YVTDRYPPSTDRFVGDRYGD 2688
                                        E R+ KYG RD YV DRY PS DRF GDRYG 
Sbjct: 174  DRFGGERDRYMED--RYDGGRYGDRDRFESRDNKYGTRDRYVNDRYAPSGDRFSGDRYGG 231

Query: 2689 SDRYPTNGYGKERLYERDGGPRRSSERYGGGGPARYEGKGYRDRAGPYDRPRRGGQPSSF 2868
            SDRYP NGYGK+R Y+RD  PR   +RY GGG AR EG+ YR+R GPYDRP RGG+PSSF
Sbjct: 232  SDRYPQNGYGKDRGYDRDAAPRGGGDRYAGGGSARNEGRSYRNRPGPYDRPNRGGRPSSF 291

Query: 2869 DRY 2877
            DRY
Sbjct: 292  DRY 294


>emb|CAN66927.1| hypothetical protein VITISV_011831 [Vitis vinifera]
          Length = 240

 Score =  248 bits (632), Expect = 9e-63
 Identities = 128/242 (52%), Positives = 141/242 (58%), Gaps = 1/242 (0%)
 Frame = +1

Query: 2155 MMERDTGRPRGFGFLTFADRRGMEDAIREMHGRELGDRAISVNKAQPKMGGDEAXXXXXX 2334
            M+ERDTGRPRGFGF+T+ADRRGMEDAIREMHGR+ GDR ISVNKAQPKMG D        
Sbjct: 1    MLERDTGRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISVNKAQPKMGEDPDHGYNGG 60

Query: 2335 XXXXXXXXXXXXXXXXXQDECFKCGRSGHWARDCPSAXXXXXXXXXXXXXXXXXXXXXXX 2514
                             QD+CFKCGR GHWARDCPS+                       
Sbjct: 61   YSSGGRGSYGGGDRSAGQDDCFKCGRPGHWARDCPSSGGGRGRGGAPFPSRSRFSGGRGD 120

Query: 2515 XXXXXXXXXXXXVXXXXXXXXXXXXXXEIRETKYGGRD-YVTDRYPPSTDRFVGDRYGDS 2691
                                       E R+ KYG RD YV DRY PS DRF GDRYG S
Sbjct: 121  RFGGERDRYMED--RYDGGRYGDRDRFESRDNKYGTRDRYVNDRYAPSGDRFSGDRYGGS 178

Query: 2692 DRYPTNGYGKERLYERDGGPRRSSERYGGGGPARYEGKGYRDRAGPYDRPRRGGQPSSFD 2871
            DRYP NGYGK+R Y+RD  PR   +RY GGG AR EG+ YR+R GPYDRP RGG+PSSFD
Sbjct: 179  DRYPQNGYGKDRGYDRDAAPRGGGDRYAGGGSARNEGRSYRNRPGPYDRPNRGGRPSSFD 238

Query: 2872 RY 2877
            RY
Sbjct: 239  RY 240


>ref|XP_002315330.1| predicted protein [Populus trichocarpa] gi|222864370|gb|EEF01501.1|
            predicted protein [Populus trichocarpa]
          Length = 280

 Score =  244 bits (622), Expect = 1e-61
 Identities = 125/245 (51%), Positives = 145/245 (59%), Gaps = 2/245 (0%)
 Frame = +1

Query: 2149 QIMMERDTGRPRGFGFLTFADRRGMEDAIREMHGRELGDRAISVNKAQPKMGGDEA-XXX 2325
            Q+M+ERDTGRPRGFGF+TFADRR M+DAIREMHGR+ GDR ISVNKAQPK+GGD++    
Sbjct: 37   QVMLERDTGRPRGFGFITFADRRAMDDAIREMHGRDFGDRVISVNKAQPKIGGDDSDHGY 96

Query: 2326 XXXXXXXXXXXXXXXXXXXXQDECFKCGRSGHWARDCPSAXXXXXXXXXXXXXXXXXXXX 2505
                                QDECFKCGRSGHWARDCPSA                    
Sbjct: 97   RGGYSTGSRGGYGGGDRPAGQDECFKCGRSGHWARDCPSAGGRGGGGGLISSRSRFGGAG 156

Query: 2506 XXXXXXXXXXXXXXXVXXXXXXXXXXXXXXEIRETKYGGRD-YVTDRYPPSTDRFVGDRY 2682
                                          + R+ KYGGRD Y +DRYPP+ DRF GDRY
Sbjct: 157  DRGDRFGGDRDRYID-DRYDGGRYGDKDRFDSRDNKYGGRDRYASDRYPPNGDRFSGDRY 215

Query: 2683 GDSDRYPTNGYGKERLYERDGGPRRSSERYGGGGPARYEGKGYRDRAGPYDRPRRGGQPS 2862
            G SDRY  NGYGK++ Y+RD GPR  ++RYG GGP R +   YR+R  PYDRP RGG PS
Sbjct: 216  GGSDRYAQNGYGKDKGYDRDVGPRGGNDRYGSGGPQRNDRSSYRNRPAPYDRPSRGGHPS 275

Query: 2863 SFDRY 2877
            SF+RY
Sbjct: 276  SFERY 280


>ref|XP_004150370.1| PREDICTED: uncharacterized protein LOC101207282 [Cucumis sativus]
            gi|449524890|ref|XP_004169454.1| PREDICTED:
            uncharacterized LOC101207282 [Cucumis sativus]
          Length = 283

 Score =  236 bits (603), Expect = 2e-59
 Identities = 126/248 (50%), Positives = 144/248 (58%), Gaps = 5/248 (2%)
 Frame = +1

Query: 2149 QIMMERDTGRPRGFGFLTFADRRGMEDAIREMHGRELGDRAISVNKAQPKMGGDEAXXXX 2328
            QIM+ERDTGRPRGFGF+TFADRRGM+DAIREMHG+ELG+R ISVNKA+PKM GD+     
Sbjct: 37   QIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGF 96

Query: 2329 XXXXXXXXXXXXXXXXXXX---QDECFKCGRSGHWARDCPSAXXXXXXXXXXXXXXXXXX 2499
                                  QDECFKCGR GHWARDCPS                   
Sbjct: 97   RGGGYSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFD 156

Query: 2500 XXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXEIRETKYGGRD-YVTDRYPPSTDRFVG- 2673
                                            + R+ KYG RD Y  DRYP + DRF G 
Sbjct: 157  SDGRGDRFGGDRDRYVD-ERYNGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFTGS 215

Query: 2674 DRYGDSDRYPTNGYGKERLYERDGGPRRSSERYGGGGPARYEGKGYRDRAGPYDRPRRGG 2853
            DRY  SDRYP NGY K+R+Y+RD GPR  S+RYG GGP R+EG+ YRDR GPYDRP R G
Sbjct: 216  DRYDVSDRYPQNGYVKDRVYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRVG 275

Query: 2854 QPSSFDRY 2877
            +PSS+DRY
Sbjct: 276  RPSSYDRY 283


Top