BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008740
         (1073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36057.3| unnamed protein product [Vitis vinifera]              323   3e-86
ref|XP_002515963.1| DNA repair/transcription protein met18/mms19...   296   5e-78
ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788...   260   5e-67
ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ...   252   1e-64
ref|XP_003597674.1| MMS19 nucleotide excision repair protein-lik...   248   1e-63

>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  323 bits (829), Expect = 3e-86
 Identities = 180/366 (49%), Positives = 232/366 (63%), Gaps = 9/366 (2%)
 Frame = -2

Query: 1072 LASYATDLFENLSCYFPIHFTHPKGEDIDLKKEELSRTLMMAFASTPLFEPFAIXXXXXX 893
            LAS+A DLF+ L CYFPIHFTHP+GED+D+K+++LSR LM+AF+ST LFEPFAI      
Sbjct: 211  LASFAGDLFDILGCYFPIHFTHPQGEDVDVKRDDLSRALMLAFSSTTLFEPFAIPLLLEK 270

Query: 892  XXXXXXLAKVESLKYLSYCSDKYGAARMAKHVKVMWSALKEIIYTSPXXXXXXXXXXV-D 716
                  LAKV+SLKYLS C  KYG  RM KHV+ +W ++K+ I+ S           + D
Sbjct: 271  LSSSLPLAKVDSLKYLSNCLLKYGDDRMTKHVEAIWFSVKDAIFCSEQEPMLSLASELLD 330

Query: 715  GMSFQESHTVTEALVLLRKVIYQHSNXXXXXXXXXXXIKRTVDDIHQFKEYNGITLQSKQ 536
             + FQE+  VTEA++LL+KVI ++S            I   V+ +  F+ YN I LQSK 
Sbjct: 331  HVGFQENEIVTEAIILLQKVILENSGLSLSLIVGDKDINTIVNTVTSFRSYNDIPLQSKH 390

Query: 535  RLHAVGCILYLSAKASIGSCNRVFEGFFPRLIHALGISLENS--------DVPLSSPCNF 380
            +L A+G ILY+SAKASI  CNRVFE FF RL+  LG+S+ NS        D   S   NF
Sbjct: 391  KLCAIGRILYVSAKASITCCNRVFESFFFRLMDTLGLSVRNSSGDCLPNFDYVFSERLNF 450

Query: 379  GATYLCVELLAGCRALVVGTEGNASTNVLAQEAWCNMLCSYGTSLTKIFSFTLVTGQDGS 200
            GA YLC+ELLA CR LVVG+E   S +V AQE+WC ML S+ + L K FS  L    D  
Sbjct: 451  GALYLCIELLAACRDLVVGSEELTSKSVSAQESWCCMLHSFSSLLMKAFSSVLDASTDKD 510

Query: 199  TQNAYLHYGVKGLQILATFPGNFYPLSKSVYESILLKLISVVTLNFXXXXXXXXXXXXLV 20
               A ++ GVKGLQILATFPG F P+SKS++E++LL  IS++  +F            LV
Sbjct: 511  AYEADIYSGVKGLQILATFPGEFLPISKSIFENVLLTFISIIVEDFNKTLLWKLALKALV 570

Query: 19   EIGSFV 2
            +IGSF+
Sbjct: 571  QIGSFI 576


>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
            communis] gi|223544868|gb|EEF46383.1| DNA
            repair/transcription protein met18/mms19, putative
            [Ricinus communis]
          Length = 1174

 Score =  296 bits (759), Expect = 5e-78
 Identities = 161/366 (43%), Positives = 225/366 (61%), Gaps = 10/366 (2%)
 Frame = -2

Query: 1069 ASYATDLFENLSCYFPIHFTHPKGEDIDLKKEELSRTLMMAFASTPLFEPFAIXXXXXXX 890
            +S+A D+F  L CYFPIHFTHPK ED+D+K+++LSR LM+AF+STPLFEPFA+       
Sbjct: 211  SSFAGDIFSILGCYFPIHFTHPKAEDVDVKRDDLSRALMLAFSSTPLFEPFAMPLLLEKL 270

Query: 889  XXXXXLAKVESLKYLSYCSDKYGAARMAKHVKVMWSALKEIIYTS-PXXXXXXXXXXVDG 713
                  AKV+SLKYLSYC+ K+ A R+A+H   +WS+LK+ IY+S            VD 
Sbjct: 271  SSSLPTAKVDSLKYLSYCTLKFRADRIAEHAGAIWSSLKDAIYSSGEEPMLSSDLESVDS 330

Query: 712  MSFQESHTVTEALVLLRKVIYQHSNXXXXXXXXXXXIKRTVDDIHQFKEYNGITLQSKQR 533
               +++   TEAL+LL  +I Q++N           +K   + I  +K YN I+LQSKQ+
Sbjct: 331  PGSEKNEIATEALLLLENLIVQNNNFFLSMIISDEEVKMIFNTITSYKSYNEISLQSKQK 390

Query: 532  LHAVGCILYLSAKASIGSCNRVFEGFFPRLIHALGISLENSD---------VPLSSPCNF 380
            LH VG ILY+ AK S+ SCNR+FE +FPRL+ ALGI +EN+          V    P N+
Sbjct: 391  LHMVGRILYVCAKVSVSSCNRIFESYFPRLMEALGILVENTSGACHSNENCVKAKQP-NY 449

Query: 379  GATYLCVELLAGCRALVVGTEGNASTNVLAQEAWCNMLCSYGTSLTKIFSFTLVTGQDGS 200
            G+ YL ++LL  CR L   ++  AS  +   E +C +L  + TSLT+ FS  L T   G 
Sbjct: 450  GSFYLSIKLLGACRDLSTSSDNLASQCISTNETYCCLLQRFSTSLTETFSAALATSTSGP 509

Query: 199  TQNAYLHYGVKGLQILATFPGNFYPLSKSVYESILLKLISVVTLNFXXXXXXXXXXXXLV 20
             Q+  ++ GVKGLQILATFPG +  LSK  +++IL+  +S++T++F            LV
Sbjct: 510  AQDVDMYLGVKGLQILATFPGGYLFLSKLTFDNILMTFLSIITVDFNKTLLWNQALKALV 569

Query: 19   EIGSFV 2
            +IGSFV
Sbjct: 570  QIGSFV 575


>ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788537 [Glycine max]
          Length = 1135

 Score =  260 bits (664), Expect = 5e-67
 Identities = 146/359 (40%), Positives = 204/359 (56%), Gaps = 3/359 (0%)
 Frame = -2

Query: 1072 LASYATDLFENLSCYFPIHFTHPKGEDIDLKKEELSRTLMMAFASTPLFEPFAIXXXXXX 893
            LASYA D+F+ L  YFPIHFTHP   D  +++++LS +LM AF+STPLFEPF I      
Sbjct: 211  LASYAKDVFDILEPYFPIHFTHPSSGDTHVQRDDLSTSLMSAFSSTPLFEPFVIPLLLEK 270

Query: 892  XXXXXXLAKVESLKYLSYCSDKYGAARMAKHVKVMWSALKEIIYT-SPXXXXXXXXXXVD 716
                   AK++SLKYL  CS KYGA R+AK+   +WS+LK+ + T             VD
Sbjct: 271  LSSSLHSAKIDSLKYLRVCSSKYGAERIAKYAGAIWSSLKDTLSTYLGEPDFSFTIAPVD 330

Query: 715  GMSFQESHTVTEALVLLRKVIYQHSNXXXXXXXXXXXIKRTVDDIHQFKEYNGITLQSKQ 536
            G+ F E+  V EAL LL+++I Q+S+           +      I  ++ Y+ I +Q K+
Sbjct: 331  GIGFPENEFVIEALSLLQQLIAQNSSLLVSLIIDDEDVNTIFSTITSYETYDAIPVQEKK 390

Query: 535  RLHAVGCILYLSAKASIGSCNRVFEGFFPRLIHALGISLE--NSDVPLSSPCNFGATYLC 362
            +LHA+G ILY+++K +I SCN +FE  F R++  LG S+   N D+  S    FG  YLC
Sbjct: 391  KLHAIGRILYITSKTTISSCNAMFESLFTRMMDNLGFSVRFPNGDISPSQRLKFGFLYLC 450

Query: 361  VELLAGCRALVVGTEGNASTNVLAQEAWCNMLCSYGTSLTKIFSFTLVTGQDGSTQNAYL 182
            +ELLAGCR L+VG+E  A   V   E  C ML S+ T L   F   L    D    +   
Sbjct: 451  IELLAGCRELIVGSEEPALQYVFEHETCCTMLHSFSTPLFNAFGSVLAVSADRGPLDPDT 510

Query: 181  HYGVKGLQILATFPGNFYPLSKSVYESILLKLISVVTLNFXXXXXXXXXXXXLVEIGSF 5
            + GVKGLQILA F  + +P+ KS++E+IL K +S++  +F            L  +GSF
Sbjct: 511  YVGVKGLQILAMFHSDVFPIQKSIFENILKKFMSIIIEDFNKTILWEAALKALHHVGSF 569


>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis
            sativus]
          Length = 1147

 Score =  252 bits (644), Expect = 1e-64
 Identities = 151/361 (41%), Positives = 211/361 (58%), Gaps = 4/361 (1%)
 Frame = -2

Query: 1072 LASYATDLFENLSCYFPIHFTHPKGEDIDLKKEELSRTLMMAFASTPLFEPFAIXXXXXX 893
            LAS ++DLFE L CYFPIHFTH K EDID+++ +LS  LM AF+STPLFEPFAI      
Sbjct: 211  LASSSSDLFEFLGCYFPIHFTHGKEEDIDVRRNDLSHALMRAFSSTPLFEPFAIPLLLEK 270

Query: 892  XXXXXXLAKVESLKYLSYCSDKYGAARMAKHVKVMWSALKEIIYTS-PXXXXXXXXXXVD 716
                  LAK++SLKYLS C+ KYGA RM KH + +WS++KEII+TS            ++
Sbjct: 271  LSSSLPLAKIDSLKYLSDCTVKYGADRMKKHSEAIWSSVKEIIFTSIGQPNLSINTESLN 330

Query: 715  GMSFQESHTVTEALVLLRKVIYQHSNXXXXXXXXXXXIKRTVDDIHQFKEYNGITLQSKQ 536
              SFQE+   TEAL LL+K++   +            +K   + ++ +  Y    LQS+Q
Sbjct: 331  SPSFQENEMTTEALRLLQKMVVASNGLFLTLIINDEDVKDIFNILNIYTCYKDFPLQSRQ 390

Query: 535  RLHAVGCILYLSAKASIGSCNRVFEGFFPRLIHALGISLENSDVPLSSP---CNFGATYL 365
            RL+AVG ILY SA AS+ SC+ VFE +F RL+  +GIS++       SP    NFGA YL
Sbjct: 391  RLNAVGHILYTSASASVASCDHVFESYFHRLLDFMGISVDQYHNDKISPIRNLNFGALYL 450

Query: 364  CVELLAGCRALVVGTEGNASTNVLAQEAWCNMLCSYGTSLTKIFSFTLVTGQDGSTQNAY 185
            C+E++A CR L+V ++ N  +    +E   +ML  +  S+ ++ S T          +A 
Sbjct: 451  CIEVIAACRNLIVSSDENTCS---VKEKSYSMLQIFSCSVVQLLSSTFSGIVKRDLHDAE 507

Query: 184  LHYGVKGLQILATFPGNFYPLSKSVYESILLKLISVVTLNFXXXXXXXXXXXXLVEIGSF 5
             +  VKGL  L+TFP    P+S+ ++E ILL+ +S +T+NF            L  IGSF
Sbjct: 508  FYCAVKGLLNLSTFPVGSSPVSRVIFEDILLEFMSFITVNFKFGSLWNHALKALQHIGSF 567

Query: 4    V 2
            V
Sbjct: 568  V 568


>ref|XP_003597674.1| MMS19 nucleotide excision repair protein-like protein [Medicago
            truncatula] gi|355486722|gb|AES67925.1| MMS19 nucleotide
            excision repair protein-like protein [Medicago
            truncatula]
          Length = 1140

 Score =  248 bits (634), Expect = 1e-63
 Identities = 144/364 (39%), Positives = 206/364 (56%), Gaps = 7/364 (1%)
 Frame = -2

Query: 1072 LASYATDLFENLSCYFPIHFTHPKGEDIDLKKEELSRTLMMAFASTPLFEPFAIXXXXXX 893
            LAS+A D+F+ L  YFPIHFTH    D  +++++LSRTLM AFASTP+FEPF I      
Sbjct: 211  LASFARDVFDLLEPYFPIHFTHQTSGDTHVQRDDLSRTLMSAFASTPVFEPFVIPLLLQK 270

Query: 892  XXXXXXLAKVESLKYLSYCSDKYGAARMAKHVKVMWSALKEIIYT-SPXXXXXXXXXXVD 716
                   AK++SL+YL  CS KYGA R+AK+   +WS+LK+ +YT              D
Sbjct: 271  LSSSLHSAKIDSLQYLRVCSSKYGAERIAKYTGAIWSSLKDTLYTYLGEPDFSFTLAPTD 330

Query: 715  GMSFQESHTVTEALVLLRKVIYQHSNXXXXXXXXXXXIKRTVDDIHQFKEYNGITLQSKQ 536
            G++F +S  V EAL LL+++I Q+S+           +    + I  ++ Y+ I++Q K+
Sbjct: 331  GINFPKSEVVVEALSLLQQLIVQNSSQLVSLIIDDEDVNFITNSIASYEMYDTISVQEKK 390

Query: 535  RLHAVGCILYLSAKASIGSCNRVFEGFFPRLIHALGIS------LENSDVPLSSPCNFGA 374
            +LHA+G ILY+SAK SI SCN VF+  F R++  LG S      L+N  +  S   NFG 
Sbjct: 391  KLHAIGRILYISAKTSIPSCNAVFQSLFLRMMDKLGFSASNIDGLQNGGILASQSVNFGF 450

Query: 373  TYLCVELLAGCRALVVGTEGNASTNVLAQEAWCNMLCSYGTSLTKIFSFTLVTGQDGSTQ 194
             YLC+ELL+GCR LV+ ++         +E +C +L S    L   F   L    D    
Sbjct: 451  LYLCIELLSGCRELVILSDEK-------RETYCTILHSSSAVLFNAFGSVLAVTADRCPS 503

Query: 193  NAYLHYGVKGLQILATFPGNFYPLSKSVYESILLKLISVVTLNFXXXXXXXXXXXXLVEI 14
            +  ++ GVKGLQILA F  + +P+ KS +E+IL K +S++  +F            L  I
Sbjct: 504  HPDIYIGVKGLQILAMFHLDVFPIPKSTFENILKKFMSIIIEDFGQTVLWNATLKALFHI 563

Query: 13   GSFV 2
            GSFV
Sbjct: 564  GSFV 567