BLASTX nr result

ID: Cnidium21_contig00008720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008720
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis v...   219   2e-55
emb|CBI19930.3| unnamed protein product [Vitis vinifera]              219   2e-55
ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus ...   209   2e-52
ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|2...   209   2e-52
ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|2...   207   5e-52

>ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis vinifera]
          Length = 370

 Score =  219 bits (557), Expect = 2e-55
 Identities = 100/125 (80%), Positives = 113/125 (90%)
 Frame = -1

Query: 387 CGCVLITDASVVALANNCLHLQSLGLYYCQNITDRAIYALAHSRVKNKQSVWESVKNRYE 208
           CGCV ITD SV+ALAN CLHL+SLGLY+CQNITD+A+Y+LA SRVKNK  +WES+K+RY 
Sbjct: 241 CGCVHITDESVIALANRCLHLRSLGLYFCQNITDKAMYSLAQSRVKNKHEMWESMKSRYS 300

Query: 207 EEGLKNLNISQCTALTPPAVQALCDSCPALHTCPGRHSLIISGCLNLTSVHCACGVQAHR 28
           EEGL NLNISQCTALTPPAVQA+CDS PALHTCPGRHSLIISGCL+LTSVHCACGVQAHR
Sbjct: 301 EEGLMNLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLSLTSVHCACGVQAHR 360

Query: 27  ATNNV 13
             + +
Sbjct: 361 TASQL 365


>emb|CBI19930.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  219 bits (557), Expect = 2e-55
 Identities = 100/125 (80%), Positives = 113/125 (90%)
 Frame = -1

Query: 387 CGCVLITDASVVALANNCLHLQSLGLYYCQNITDRAIYALAHSRVKNKQSVWESVKNRYE 208
           CGCV ITD SV+ALAN CLHL+SLGLY+CQNITD+A+Y+LA SRVKNK  +WES+K+RY 
Sbjct: 299 CGCVHITDESVIALANRCLHLRSLGLYFCQNITDKAMYSLAQSRVKNKHEMWESMKSRYS 358

Query: 207 EEGLKNLNISQCTALTPPAVQALCDSCPALHTCPGRHSLIISGCLNLTSVHCACGVQAHR 28
           EEGL NLNISQCTALTPPAVQA+CDS PALHTCPGRHSLIISGCL+LTSVHCACGVQAHR
Sbjct: 359 EEGLMNLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLSLTSVHCACGVQAHR 418

Query: 27  ATNNV 13
             + +
Sbjct: 419 TASQL 423


>ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus communis]
           gi|223540477|gb|EEF42044.1| F-box/LRR-repeat protein,
           putative [Ricinus communis]
          Length = 373

 Score =  209 bits (531), Expect = 2e-52
 Identities = 96/120 (80%), Positives = 108/120 (90%)
 Frame = -1

Query: 387 CGCVLITDASVVALANNCLHLQSLGLYYCQNITDRAIYALAHSRVKNKQSVWESVKNRYE 208
           CGCV ITD SV+ALA  CLHL+SLGLYYC+NITDRA+Y+L HSRVKNK ++WESVK R +
Sbjct: 244 CGCVNITDDSVIALAYRCLHLRSLGLYYCRNITDRAMYSLVHSRVKNKPAMWESVKGRCD 303

Query: 207 EEGLKNLNISQCTALTPPAVQALCDSCPALHTCPGRHSLIISGCLNLTSVHCACGVQAHR 28
           EEGL++LNISQCTALTPPAVQALCD  PALHTC GRHSL++SGCLNLTSVHCAC VQAHR
Sbjct: 304 EEGLRSLNISQCTALTPPAVQALCDCFPALHTCSGRHSLVMSGCLNLTSVHCACAVQAHR 363


>ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|222856121|gb|EEE93668.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  209 bits (531), Expect = 2e-52
 Identities = 95/124 (76%), Positives = 109/124 (87%)
 Frame = -1

Query: 387 CGCVLITDASVVALANNCLHLQSLGLYYCQNITDRAIYALAHSRVKNKQSVWESVKNRYE 208
           CGCV ITD SV+ALAN C HL+SLGLYYC+NITDRA+Y+L H+RVKNK S+WES+K R +
Sbjct: 234 CGCVCITDDSVIALANRCPHLRSLGLYYCRNITDRAMYSLVHNRVKNKLSMWESMKGRCD 293

Query: 207 EEGLKNLNISQCTALTPPAVQALCDSCPALHTCPGRHSLIISGCLNLTSVHCACGVQAHR 28
           EEGL  LNISQCTALTPPAVQALCDS PALHTC GRHSL++SGCLNLTSVHC C VQAHR
Sbjct: 294 EEGLSRLNISQCTALTPPAVQALCDSFPALHTCSGRHSLVMSGCLNLTSVHCVCAVQAHR 353

Query: 27  ATNN 16
           + ++
Sbjct: 354 SASS 357


>ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|222843928|gb|EEE81475.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score =  207 bits (528), Expect = 5e-52
 Identities = 93/125 (74%), Positives = 110/125 (88%)
 Frame = -1

Query: 387 CGCVLITDASVVALANNCLHLQSLGLYYCQNITDRAIYALAHSRVKNKQSVWESVKNRYE 208
           CGCV ITD SV+ALAN C HL+SL LYYC+NITDRA+Y+L H+RVKNK ++WES+K RY+
Sbjct: 229 CGCVCITDDSVIALANRCPHLRSLCLYYCRNITDRAMYSLVHNRVKNKPAMWESMKGRYD 288

Query: 207 EEGLKNLNISQCTALTPPAVQALCDSCPALHTCPGRHSLIISGCLNLTSVHCACGVQAHR 28
           EEGLK+LNISQCTA+TPPAVQALCDS PALHTC GRHSL++SGC NLTSVHCAC VQAH 
Sbjct: 289 EEGLKSLNISQCTAITPPAVQALCDSFPALHTCSGRHSLVMSGCWNLTSVHCACAVQAHH 348

Query: 27  ATNNV 13
             +++
Sbjct: 349 TASSI 353


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