BLASTX nr result

ID: Cnidium21_contig00008682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008682
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324820.1| predicted protein [Populus trichocarpa] gi|2...   161   6e-38
gb|ABK93790.1| unknown [Populus trichocarpa] gi|118486063|gb|ABK...   161   6e-38
ref|XP_002309570.1| predicted protein [Populus trichocarpa] gi|1...   159   3e-37
ref|XP_002516579.1| 60S ribosomal protein L37, putative [Ricinus...   158   5e-37
ref|XP_003597753.1| Ribosomal protein L37 [Medicago truncatula] ...   158   6e-37

>ref|XP_002324820.1| predicted protein [Populus trichocarpa] gi|222866254|gb|EEF03385.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score =  161 bits (408), Expect = 6e-38
 Identities = 75/94 (79%), Positives = 80/94 (85%)
 Frame = +2

Query: 83  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARIRKYNWSEKAIXXXXXXX 262
           GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACA+PAAR+RKYNWSEKAI       
Sbjct: 18  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARVRKYNWSEKAIRRKTTGT 77

Query: 263 XXXXYLRHVPRRFKSNFREGTQATPRSKGTAPAS 364
               YLRH+PRRFK+NFREGTQA PR+KG A AS
Sbjct: 78  GRMKYLRHLPRRFKTNFREGTQAAPRNKGAAAAS 111


>gb|ABK93790.1| unknown [Populus trichocarpa] gi|118486063|gb|ABK94875.1| unknown
           [Populus trichocarpa]
          Length = 96

 Score =  161 bits (408), Expect = 6e-38
 Identities = 75/94 (79%), Positives = 80/94 (85%)
 Frame = +2

Query: 83  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARIRKYNWSEKAIXXXXXXX 262
           GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACA+PAAR+RKYNWSEKAI       
Sbjct: 2   GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARVRKYNWSEKAIRRKTTGT 61

Query: 263 XXXXYLRHVPRRFKSNFREGTQATPRSKGTAPAS 364
               YLRH+PRRFK+NFREGTQA PR+KG A AS
Sbjct: 62  GRMKYLRHLPRRFKTNFREGTQAAPRNKGAAAAS 95


>ref|XP_002309570.1| predicted protein [Populus trichocarpa] gi|118482197|gb|ABK93027.1|
           unknown [Populus trichocarpa]
           gi|222855546|gb|EEE93093.1| predicted protein [Populus
           trichocarpa]
          Length = 94

 Score =  159 bits (402), Expect = 3e-37
 Identities = 74/93 (79%), Positives = 79/93 (84%)
 Frame = +2

Query: 83  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARIRKYNWSEKAIXXXXXXX 262
           GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACA+PAAR+RKYNWS KAI       
Sbjct: 2   GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARVRKYNWSVKAIRRKTTGT 61

Query: 263 XXXXYLRHVPRRFKSNFREGTQATPRSKGTAPA 361
               YLRH+PRRFK+NFREGTQATPR+KG A A
Sbjct: 62  GRMKYLRHLPRRFKTNFREGTQATPRNKGAAAA 94


>ref|XP_002516579.1| 60S ribosomal protein L37, putative [Ricinus communis]
           gi|223544399|gb|EEF45920.1| 60S ribosomal protein L37,
           putative [Ricinus communis]
          Length = 96

 Score =  158 bits (400), Expect = 5e-37
 Identities = 74/94 (78%), Positives = 79/94 (84%)
 Frame = +2

Query: 83  GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARIRKYNWSEKAIXXXXXXX 262
           GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPA+R+RKYNWS KAI       
Sbjct: 2   GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPASRLRKYNWSVKAIRRKTTGT 61

Query: 263 XXXXYLRHVPRRFKSNFREGTQATPRSKGTAPAS 364
               YLRHVPRRFK+NFREGTQA PR+KG A A+
Sbjct: 62  GRMRYLRHVPRRFKTNFREGTQAPPRNKGAAAAT 95


>ref|XP_003597753.1| Ribosomal protein L37 [Medicago truncatula]
           gi|355486801|gb|AES68004.1| Ribosomal protein L37
           [Medicago truncatula]
          Length = 102

 Score =  158 bits (399), Expect = 6e-37
 Identities = 74/95 (77%), Positives = 79/95 (83%)
 Frame = +2

Query: 77  KAGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARIRKYNWSEKAIXXXXX 256
           ++GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAAR+RKYNWSEKAI     
Sbjct: 8   ESGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSEKAIRRKTT 67

Query: 257 XXXXXXYLRHVPRRFKSNFREGTQATPRSKGTAPA 361
                 YLR+VPRRFKS FREGT+A PR KG A A
Sbjct: 68  GTGRMRYLRNVPRRFKSGFREGTEAAPRKKGAASA 102


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