BLASTX nr result

ID: Cnidium21_contig00008662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008662
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313663.1| predicted protein [Populus trichocarpa] gi|1...    99   6e-19
gb|ABK93470.1| unknown [Populus trichocarpa]                           99   1e-18
ref|XP_002328062.1| predicted protein [Populus trichocarpa] gi|1...    99   1e-18
emb|CBI17057.3| unnamed protein product [Vitis vinifera]               98   1e-18
ref|XP_002283025.1| PREDICTED: 60S acidic ribosomal protein P2B ...    97   3e-18

>ref|XP_002313663.1| predicted protein [Populus trichocarpa] gi|118484510|gb|ABK94130.1|
           unknown [Populus trichocarpa]
           gi|118485202|gb|ABK94462.1| unknown [Populus
           trichocarpa] gi|118487376|gb|ABK95516.1| unknown
           [Populus trichocarpa] gi|118488119|gb|ABK95879.1|
           unknown [Populus trichocarpa]
           gi|222850071|gb|EEE87618.1| predicted protein [Populus
           trichocarpa]
          Length = 113

 Score = 99.4 bits (246), Expect = 6e-19
 Identities = 49/55 (89%), Positives = 52/55 (94%)
 Frame = +1

Query: 136 GGATCPTNDDIKNILGSVGADADDDKIELLLSEVKGKDITELIASGREKLASVPS 300
           GG TCPT +D+KNILGSVGADADDD+IELLLS VKGKDITELIASGREKLASVPS
Sbjct: 13  GGNTCPTAEDLKNILGSVGADADDDRIELLLSSVKGKDITELIASGREKLASVPS 67


>gb|ABK93470.1| unknown [Populus trichocarpa]
          Length = 114

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 50/62 (80%), Positives = 54/62 (87%)
 Frame = +1

Query: 136 GGATCPTNDDIKNILGSVGADADDDKIELLLSEVKGKDITELIASGREKLASVPSXXXXX 315
           GG TCPT +D+K+ILGSVGADADDD+IELLLS VKGKDITELIASGREKLASVPS     
Sbjct: 13  GGNTCPTAEDLKHILGSVGADADDDRIELLLSSVKGKDITELIASGREKLASVPSGGGVA 72

Query: 316 VA 321
           VA
Sbjct: 73  VA 74


>ref|XP_002328062.1| predicted protein [Populus trichocarpa] gi|118481307|gb|ABK92597.1|
           unknown [Populus trichocarpa]
           gi|118485702|gb|ABK94701.1| unknown [Populus
           trichocarpa] gi|222837577|gb|EEE75942.1| predicted
           protein [Populus trichocarpa]
          Length = 114

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 50/62 (80%), Positives = 54/62 (87%)
 Frame = +1

Query: 136 GGATCPTNDDIKNILGSVGADADDDKIELLLSEVKGKDITELIASGREKLASVPSXXXXX 315
           GG TCPT +D+K+ILGSVGADADDD+IELLLS VKGKDITELIASGREKLASVPS     
Sbjct: 13  GGNTCPTAEDLKHILGSVGADADDDRIELLLSSVKGKDITELIASGREKLASVPSGGGVA 72

Query: 316 VA 321
           VA
Sbjct: 73  VA 74


>emb|CBI17057.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 51/75 (68%), Positives = 58/75 (77%)
 Frame = +1

Query: 97  KMKXXXXXXXXXXGGATCPTNDDIKNILGSVGADADDDKIELLLSEVKGKDITELIASGR 276
           KMK          GG TCP+ +D+K+ILGSVGA+ADDD+IELLL+EVKGKDITELIASGR
Sbjct: 32  KMKVIAAYLLAVLGGNTCPSAEDLKDILGSVGAEADDDRIELLLAEVKGKDITELIASGR 91

Query: 277 EKLASVPSXXXXXVA 321
           EKLASVPS     VA
Sbjct: 92  EKLASVPSGGGAAVA 106


>ref|XP_002283025.1| PREDICTED: 60S acidic ribosomal protein P2B [Vitis vinifera]
           gi|297740089|emb|CBI30271.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 49/62 (79%), Positives = 55/62 (88%)
 Frame = +1

Query: 136 GGATCPTNDDIKNILGSVGADADDDKIELLLSEVKGKDITELIASGREKLASVPSXXXXX 315
           GG TCP+ +D+K+ILGSVGA+ADDD+IELLLSEVKGKDITELIASGREKLASVPS     
Sbjct: 13  GGNTCPSANDLKDILGSVGAEADDDRIELLLSEVKGKDITELIASGREKLASVPSGGGVA 72

Query: 316 VA 321
           VA
Sbjct: 73  VA 74


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