BLASTX nr result

ID: Cnidium21_contig00008642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008642
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001768092.1| predicted protein [Physcomitrella patens sub...    57   3e-09
ref|XP_001781989.1| predicted protein [Physcomitrella patens sub...    57   4e-09
ref|XP_003541476.1| PREDICTED: topless-related protein 4-like [G...    56   9e-09
ref|XP_003549747.1| PREDICTED: topless-related protein 4-like [G...    56   9e-09
ref|XP_002517701.1| WD-repeat protein, putative [Ricinus communi...    55   8e-06

>ref|XP_001768092.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162680730|gb|EDQ67164.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 1158

 Score = 57.4 bits (137), Expect(2) = 3e-09
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = +2

Query: 308 ATVNVLPELWQPSSGRLMTNDISETKPEDVVNCILL 415
           AT +V P+LWQP+SG LMTNDISET PED V CI L
Sbjct: 834 ATASVTPQLWQPASGILMTNDISETNPEDAVPCIAL 869



 Score = 28.5 bits (62), Expect(2) = 3e-09
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +1

Query: 409 LALTYNDGYVISGSGGKFSV 468
           +AL+ ND YV+S SGGK S+
Sbjct: 867 IALSKNDSYVMSASGGKVSL 886


>ref|XP_001781989.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162666562|gb|EDQ53213.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 1102

 Score = 57.0 bits (136), Expect(2) = 4e-09
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = +2

Query: 308 ATVNVLPELWQPSSGRLMTNDISETKPEDVVNCILL 415
           AT +V P+LWQP+SG LMTNDISET PED V CI L
Sbjct: 778 ATASVSPQLWQPASGILMTNDISETNPEDAVPCIAL 813



 Score = 28.5 bits (62), Expect(2) = 4e-09
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +1

Query: 409 LALTYNDGYVISGSGGKFSV 468
           +AL+ ND YV+S SGGK S+
Sbjct: 811 IALSKNDSYVMSASGGKVSL 830


>ref|XP_003541476.1| PREDICTED: topless-related protein 4-like [Glycine max]
          Length = 1232

 Score = 56.2 bits (134), Expect(2) = 9e-09
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +2

Query: 308  ATVNVLPELWQPSSGRLMTNDISETKPEDVVNCILL 415
            AT ++ P+LWQPSSG LMTNDIS+T PED V+C  L
Sbjct: 915  ATASIQPQLWQPSSGILMTNDISDTNPEDAVSCFAL 950



 Score = 28.1 bits (61), Expect(2) = 9e-09
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +1

Query: 412  ALTYNDGYVISGSGGKFSV 468
            AL+ ND YV+S SGGK S+
Sbjct: 949  ALSKNDSYVMSASGGKISL 967


>ref|XP_003549747.1| PREDICTED: topless-related protein 4-like [Glycine max]
          Length = 1134

 Score = 56.2 bits (134), Expect(2) = 9e-09
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +2

Query: 308 ATVNVLPELWQPSSGRLMTNDISETKPEDVVNCILL 415
           AT ++ P+LWQPSSG LMTNDIS+T PED V+C  L
Sbjct: 817 ATASIQPQLWQPSSGILMTNDISDTNPEDAVSCFAL 852



 Score = 28.1 bits (61), Expect(2) = 9e-09
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +1

Query: 412 ALTYNDGYVISGSGGKFSV 468
           AL+ ND YV+S SGGK S+
Sbjct: 851 ALSKNDSYVMSASGGKISL 869


>ref|XP_002517701.1| WD-repeat protein, putative [Ricinus communis]
           gi|223543333|gb|EEF44865.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 1115

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/36 (66%), Positives = 28/36 (77%)
 Frame = +2

Query: 308 ATVNVLPELWQPSSGRLMTNDISETKPEDVVNCILL 415
           AT NV P+LWQPSSG LMTNDI++T PE+ V C  L
Sbjct: 793 ATANVSPQLWQPSSGILMTNDITDTNPEEAVPCFAL 828


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