BLASTX nr result
ID: Cnidium21_contig00008642
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00008642 (512 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_001768092.1| predicted protein [Physcomitrella patens sub... 57 3e-09 ref|XP_001781989.1| predicted protein [Physcomitrella patens sub... 57 4e-09 ref|XP_003541476.1| PREDICTED: topless-related protein 4-like [G... 56 9e-09 ref|XP_003549747.1| PREDICTED: topless-related protein 4-like [G... 56 9e-09 ref|XP_002517701.1| WD-repeat protein, putative [Ricinus communi... 55 8e-06 >ref|XP_001768092.1| predicted protein [Physcomitrella patens subsp. patens] gi|162680730|gb|EDQ67164.1| predicted protein [Physcomitrella patens subsp. patens] Length = 1158 Score = 57.4 bits (137), Expect(2) = 3e-09 Identities = 26/36 (72%), Positives = 29/36 (80%) Frame = +2 Query: 308 ATVNVLPELWQPSSGRLMTNDISETKPEDVVNCILL 415 AT +V P+LWQP+SG LMTNDISET PED V CI L Sbjct: 834 ATASVTPQLWQPASGILMTNDISETNPEDAVPCIAL 869 Score = 28.5 bits (62), Expect(2) = 3e-09 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 Query: 409 LALTYNDGYVISGSGGKFSV 468 +AL+ ND YV+S SGGK S+ Sbjct: 867 IALSKNDSYVMSASGGKVSL 886 >ref|XP_001781989.1| predicted protein [Physcomitrella patens subsp. patens] gi|162666562|gb|EDQ53213.1| predicted protein [Physcomitrella patens subsp. patens] Length = 1102 Score = 57.0 bits (136), Expect(2) = 4e-09 Identities = 26/36 (72%), Positives = 29/36 (80%) Frame = +2 Query: 308 ATVNVLPELWQPSSGRLMTNDISETKPEDVVNCILL 415 AT +V P+LWQP+SG LMTNDISET PED V CI L Sbjct: 778 ATASVSPQLWQPASGILMTNDISETNPEDAVPCIAL 813 Score = 28.5 bits (62), Expect(2) = 4e-09 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 Query: 409 LALTYNDGYVISGSGGKFSV 468 +AL+ ND YV+S SGGK S+ Sbjct: 811 IALSKNDSYVMSASGGKVSL 830 >ref|XP_003541476.1| PREDICTED: topless-related protein 4-like [Glycine max] Length = 1232 Score = 56.2 bits (134), Expect(2) = 9e-09 Identities = 24/36 (66%), Positives = 29/36 (80%) Frame = +2 Query: 308 ATVNVLPELWQPSSGRLMTNDISETKPEDVVNCILL 415 AT ++ P+LWQPSSG LMTNDIS+T PED V+C L Sbjct: 915 ATASIQPQLWQPSSGILMTNDISDTNPEDAVSCFAL 950 Score = 28.1 bits (61), Expect(2) = 9e-09 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +1 Query: 412 ALTYNDGYVISGSGGKFSV 468 AL+ ND YV+S SGGK S+ Sbjct: 949 ALSKNDSYVMSASGGKISL 967 >ref|XP_003549747.1| PREDICTED: topless-related protein 4-like [Glycine max] Length = 1134 Score = 56.2 bits (134), Expect(2) = 9e-09 Identities = 24/36 (66%), Positives = 29/36 (80%) Frame = +2 Query: 308 ATVNVLPELWQPSSGRLMTNDISETKPEDVVNCILL 415 AT ++ P+LWQPSSG LMTNDIS+T PED V+C L Sbjct: 817 ATASIQPQLWQPSSGILMTNDISDTNPEDAVSCFAL 852 Score = 28.1 bits (61), Expect(2) = 9e-09 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +1 Query: 412 ALTYNDGYVISGSGGKFSV 468 AL+ ND YV+S SGGK S+ Sbjct: 851 ALSKNDSYVMSASGGKISL 869 >ref|XP_002517701.1| WD-repeat protein, putative [Ricinus communis] gi|223543333|gb|EEF44865.1| WD-repeat protein, putative [Ricinus communis] Length = 1115 Score = 54.7 bits (130), Expect = 8e-06 Identities = 24/36 (66%), Positives = 28/36 (77%) Frame = +2 Query: 308 ATVNVLPELWQPSSGRLMTNDISETKPEDVVNCILL 415 AT NV P+LWQPSSG LMTNDI++T PE+ V C L Sbjct: 793 ATANVSPQLWQPSSGILMTNDITDTNPEEAVPCFAL 828