BLASTX nr result

ID: Cnidium21_contig00008585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008585
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002875051.1| hypothetical protein ARALYDRAFT_490565 [Arab...    91   1e-16
emb|CAB77741.1| putative actin polymerization factor [Arabidopsi...    91   1e-16
ref|NP_567216.1| actin related protein 2/3 complex, subunit 5 [A...    91   1e-16
gb|AFK47981.1| unknown [Lotus japonicus]                               89   5e-16
ref|XP_003529044.1| PREDICTED: actin-related protein 2/3 complex...    87   1e-15

>ref|XP_002875051.1| hypothetical protein ARALYDRAFT_490565 [Arabidopsis lyrata subsp.
           lyrata] gi|297320888|gb|EFH51310.1| hypothetical protein
           ARALYDRAFT_490565 [Arabidopsis lyrata subsp. lyrata]
          Length = 132

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = +3

Query: 3   LYRGLSTGDRPTCDQCLRIHEKLTQKAGLGCILRCLTDTINTV 131
           LYRGLSTGDRPTCDQCL+IHEKLT++AGLGCILRCLTDTINTV
Sbjct: 90  LYRGLSTGDRPTCDQCLKIHEKLTERAGLGCILRCLTDTINTV 132


>emb|CAB77741.1| putative actin polymerization factor [Arabidopsis thaliana]
          Length = 159

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = +3

Query: 3   LYRGLSTGDRPTCDQCLRIHEKLTQKAGLGCILRCLTDTINTV 131
           LYRGLSTGDRPTCDQCL+IHEKLT++AGLGCILRCLTDTINTV
Sbjct: 117 LYRGLSTGDRPTCDQCLKIHEKLTERAGLGCILRCLTDTINTV 159


>ref|NP_567216.1| actin related protein 2/3 complex, subunit 5 [Arabidopsis thaliana]
           gi|15529135|gb|AAK97662.1| AT4g01710/T15B16_22
           [Arabidopsis thaliana] gi|23505771|gb|AAN28745.1|
           At4g01710/T15B16_22 [Arabidopsis thaliana]
           gi|332656668|gb|AEE82068.1| actin related protein 2/3
           complex, subunit 5 [Arabidopsis thaliana]
          Length = 132

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = +3

Query: 3   LYRGLSTGDRPTCDQCLRIHEKLTQKAGLGCILRCLTDTINTV 131
           LYRGLSTGDRPTCDQCL+IHEKLT++AGLGCILRCLTDTINTV
Sbjct: 90  LYRGLSTGDRPTCDQCLKIHEKLTERAGLGCILRCLTDTINTV 132


>gb|AFK47981.1| unknown [Lotus japonicus]
          Length = 135

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 40/43 (93%), Positives = 42/43 (97%)
 Frame = +3

Query: 3   LYRGLSTGDRPTCDQCLRIHEKLTQKAGLGCILRCLTDTINTV 131
           LYRGLSTGDRPTCDQCLRIHEKLT+KAGLGCILR LTDT+NTV
Sbjct: 93  LYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCILRFLTDTVNTV 135


>ref|XP_003529044.1| PREDICTED: actin-related protein 2/3 complex subunit 5-like
           [Glycine max]
          Length = 135

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 39/43 (90%), Positives = 42/43 (97%)
 Frame = +3

Query: 3   LYRGLSTGDRPTCDQCLRIHEKLTQKAGLGCILRCLTDTINTV 131
           LYRGL+TGDRPTCDQCLRIHEKLT+KAGLGCILR LTDT+NTV
Sbjct: 93  LYRGLATGDRPTCDQCLRIHEKLTEKAGLGCILRFLTDTVNTV 135


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