BLASTX nr result
ID: Cnidium21_contig00008579
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00008579
(1775 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana] gi|33200777... 271 3e-70
ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana] gi|75328911... 266 2e-68
gb|AAM61481.1| unknown [Arabidopsis thaliana] 265 3e-68
ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arab... 251 6e-64
ref|XP_002529526.1| hypothetical protein RCOM_1716690 [Ricinus c... 244 5e-62
>ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana] gi|332007778|gb|AED95161.1|
protein OSB3 [Arabidopsis thaliana]
Length = 442
Score = 271 bits (694), Expect = 3e-70
Identities = 168/400 (42%), Positives = 223/400 (55%), Gaps = 26/400 (6%)
Frame = +2
Query: 308 TRPTEIPWQKKVSNLVKLIGRVETPVQFCEFSDGKSWAATVISQEKKGSVSLR--IPLIF 481
T P +I ++ ++SN + LIG VE PVQF SDGK WA TVISQ + GS S IP+IF
Sbjct: 69 TPPKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQ-RSGSKSSNFWIPIIF 127
Query: 482 QGDLAHVAASHLKEEDYVYIDGQLSADSPPSALKCEQSSLQVMVHNVNFVEGS-SWKKNF 658
+GDLA +A H+K+ED +++ G+L DSPP + QS++QVMV N+NFV+ + S K
Sbjct: 128 EGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTI 187
Query: 659 SDPKILVPLESFKTDNASQKKVSRNDDYQRKESADDSTFQKKESTEEFKILDQSLLDLIT 838
S P+ V S K A KKV D+ E++ +K LI
Sbjct: 188 SPPEKEVT--SIKKKPARSKKVKVIDE---------------ETSNSWK-------HLIE 223
Query: 839 NPQEWWDIRLKQVNS----ASPAFEHKVDGKLVHINESTPDWIKKELESLKFDRRTEKKS 1006
NP+EW D R + N P F+ KV G + ++ + PDW +LE LKFD K
Sbjct: 224 NPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLS-TAPDWALLKLEELKFDVLVPK-- 280
Query: 1007 SKDGRASMNNSGDLILNSWRDLLKNSKQWRDYRENKLRGLVKPKYPDFKHKDSDAALWLD 1186
G +N D+ SW+DL++N +W D R +K KYPDFKHK++ ALW+
Sbjct: 281 ---GNIKLNQLKDIGEESWKDLVQNPDKWLDNRSDK----TNVKYPDFKHKETGEALWMT 333
Query: 1187 SAPEWVL---PGLKG-------------LEFDAPLQKGKKAD---DDTWKDLVENSEKWW 1309
++P WVL P LK LE D + KG ++ WK+LVEN KWW
Sbjct: 334 NSPIWVLSKLPPLKKNQERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWW 393
Query: 1310 DNRLNKKNPKSPDFKHKDLGTGLWLSDSPAWALSKLPPQK 1429
DNRL+K+NPK PDFKHK+ G LW+ DSP WALSKLPP K
Sbjct: 394 DNRLDKRNPKGPDFKHKETGEALWIGDSPTWALSKLPPLK 433
>ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana]
gi|75328911|sp|Q8GWJ4.1|OSB3_ARATH RecName: Full=Protein
OSB3, chloroplastic/mitochondrial; AltName:
Full=Organellar single-stranded DNA-binding protein 3;
Flags: Precursor gi|26452626|dbj|BAC43396.1| unknown
protein [Arabidopsis thaliana] gi|28973013|gb|AAO63831.1|
unknown protein [Arabidopsis thaliana]
gi|30102734|gb|AAP21285.1| At5g44785 [Arabidopsis
thaliana] gi|110743279|dbj|BAE99530.1| hypothetical
protein [Arabidopsis thaliana]
gi|332007779|gb|AED95162.1| protein OSB3 [Arabidopsis
thaliana]
Length = 440
Score = 266 bits (679), Expect = 2e-68
Identities = 168/401 (41%), Positives = 223/401 (55%), Gaps = 27/401 (6%)
Frame = +2
Query: 308 TRPTEIPWQKKVSNLVKLIGRVETPVQFCEFSDGKSWAATVISQEKKGSVSLR--IPLIF 481
T P +I ++ ++SN + LIG VE PVQF SDGK WA TVISQ + GS S IP+IF
Sbjct: 69 TPPKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQ-RSGSKSSNFWIPIIF 127
Query: 482 QGDLAHVAASHLKEEDYVYIDGQLSADSPPSALKCEQSSLQVMVHNVNFVEGS-SWKKNF 658
+GDLA +A H+K+ED +++ G+L DSPP + QS++QVMV N+NFV+ + S K
Sbjct: 128 EGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTI 187
Query: 659 SDPKILVPLESFKTDNASQKKVSRNDDYQRKESADDSTFQKKESTEEFKILDQSLLDLIT 838
S P+ V S K A KKV D+ E++ +K LI
Sbjct: 188 SPPEKEVT--SIKKKPARSKKVKVIDE---------------ETSNSWK-------HLIE 223
Query: 839 NPQEWWDIRLKQVNS----ASPAFEHKVDGKLVHINESTPDWIKKELESLKFDRRTEKKS 1006
NP+EW D R + N P F+ KV G + ++ + PDW +LE LKFD K
Sbjct: 224 NPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLS-TAPDWALLKLEELKFDVLVPK-- 280
Query: 1007 SKDGRASMNN-SGDLILNSWRDLLKNSKQWRDYRENKLRGLVKPKYPDFKHKDSDAALWL 1183
G +N G+ SW+DL++N +W D R +K KYPDFKHK++ ALW+
Sbjct: 281 ---GNIKLNQLKGE---ESWKDLVQNPDKWLDNRSDK----TNVKYPDFKHKETGEALWM 330
Query: 1184 DSAPEWVL---PGLKG-------------LEFDAPLQKGKKAD---DDTWKDLVENSEKW 1306
++P WVL P LK LE D + KG ++ WK+LVEN KW
Sbjct: 331 TNSPIWVLSKLPPLKKNQERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKW 390
Query: 1307 WDNRLNKKNPKSPDFKHKDLGTGLWLSDSPAWALSKLPPQK 1429
WDNRL+K+NPK PDFKHK+ G LW+ DSP WALSKLPP K
Sbjct: 391 WDNRLDKRNPKGPDFKHKETGEALWIGDSPTWALSKLPPLK 431
>gb|AAM61481.1| unknown [Arabidopsis thaliana]
Length = 440
Score = 265 bits (677), Expect = 3e-68
Identities = 168/401 (41%), Positives = 222/401 (55%), Gaps = 27/401 (6%)
Frame = +2
Query: 308 TRPTEIPWQKKVSNLVKLIGRVETPVQFCEFSDGKSWAATVISQEKKGSVSLR--IPLIF 481
T P I ++ ++SN + LIG VE PVQF SDGK WA TVISQ + GS S IP+IF
Sbjct: 69 TPPKTIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQ-RSGSKSSNFWIPIIF 127
Query: 482 QGDLAHVAASHLKEEDYVYIDGQLSADSPPSALKCEQSSLQVMVHNVNFVEGS-SWKKNF 658
+GDLA +A H+K+ED +++ G+L DSPP + QS++QVMV N+NFV+ + S K
Sbjct: 128 EGDLAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTI 187
Query: 659 SDPKILVPLESFKTDNASQKKVSRNDDYQRKESADDSTFQKKESTEEFKILDQSLLDLIT 838
S P+ V S K A KKV D+ E++ +K LI
Sbjct: 188 SPPEKEVT--SIKKKPARSKKVKVIDE---------------ETSNSWK-------HLIE 223
Query: 839 NPQEWWDIRLKQVNS----ASPAFEHKVDGKLVHINESTPDWIKKELESLKFDRRTEKKS 1006
NP+EW D R + N P F+ KV G + ++ + PDW +LE LKFD K
Sbjct: 224 NPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLS-TAPDWALLKLEELKFDVLVPK-- 280
Query: 1007 SKDGRASMNN-SGDLILNSWRDLLKNSKQWRDYRENKLRGLVKPKYPDFKHKDSDAALWL 1183
G +N G+ SW+DL++N +W D R +K KYPDFKHK++ ALW+
Sbjct: 281 ---GNIKLNQLKGE---ESWKDLVQNPDKWLDNRSDK----TNVKYPDFKHKETGEALWM 330
Query: 1184 DSAPEWVL---PGLKG-------------LEFDAPLQKGKKAD---DDTWKDLVENSEKW 1306
++P WVL P LK LE D + KG ++ WK+LVEN KW
Sbjct: 331 TNSPIWVLSKLPPLKKNQERPLMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKW 390
Query: 1307 WDNRLNKKNPKSPDFKHKDLGTGLWLSDSPAWALSKLPPQK 1429
WDNRL+K+NPK PDFKHK+ G LW+ DSP WALSKLPP K
Sbjct: 391 WDNRLDKRNPKGPDFKHKETGEALWIGDSPTWALSKLPPLK 431
>ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arabidopsis lyrata subsp.
lyrata] gi|297309381|gb|EFH39805.1| hypothetical protein
ARALYDRAFT_494502 [Arabidopsis lyrata subsp. lyrata]
Length = 441
Score = 251 bits (640), Expect = 6e-64
Identities = 159/405 (39%), Positives = 226/405 (55%), Gaps = 31/405 (7%)
Frame = +2
Query: 308 TRPTEIPWQKKVSNLVKLIGRVETPVQFCEFSDGKSWAATVISQEKKGSVSLR--IPLIF 481
T P I ++ ++SN + LIG VE PVQF SDGK WA TVISQ + GS S IP+IF
Sbjct: 69 TPPKRIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQ-RSGSKSSNFWIPIIF 127
Query: 482 QGDLAHVAASHLKEEDYVYIDGQLSADSPPSALKCEQSSLQVMVHNVNFVEGSSWKKNFS 661
+GDLA +A H+K+ED +++ G+L DSPP + QS++QVMV N+NFV+ ++
Sbjct: 128 EGDLAQIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAAT------ 181
Query: 662 DPKILVPLESFKTDNASQKKVSRNDDYQRKESADDSTFQKKESTEEFKILDQ----SLLD 829
KT + +K+V ST ++ +++ K++D+ S
Sbjct: 182 --------SLTKTISPPEKEVI-------------STKKRPVRSKKVKVIDEETSNSWKH 220
Query: 830 LITNPQEWWDIRLKQVNS----ASPAFEHKVDGKLVHINESTPDWIKKELESLKFDRRTE 997
LI NP+EW D R + N P F+ KV G + ++ + PDW +L+ L+FD
Sbjct: 221 LIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLS-TAPDWALPKLKELEFDVLVP 279
Query: 998 KKSSKDGRASMNN-SGDLILNSWRDLLKNSKQWRDYRENKLRGLVKPKYPDFKHKDSDAA 1174
K G +N G+ SW+DL++N +W D R +K KYPDFKHK++ A
Sbjct: 280 K-----GNIKLNQLKGE---ESWKDLVQNPDKWLDNRLDK----TNVKYPDFKHKETGEA 327
Query: 1175 LWLDSAPEWVL---PGLKG-------------LEFDAPLQKGKKAD---DDTWKDLVENS 1297
LW+ ++P WVL P LK LE D + G +++WK+LVEN
Sbjct: 328 LWMTNSPIWVLSKLPPLKKNQERPLMSNTVPQLELDVVVPNGNLTQLKREESWKNLVENP 387
Query: 1298 EKWWDNRLNKKNPKSPDFKHKDLGTGLWL-SDSPAWALSKLPPQK 1429
KWWDNRL+K+NPK+PDFKHK+ G LW+ ++SP WALSKLPP K
Sbjct: 388 SKWWDNRLDKRNPKAPDFKHKETGEVLWINNNSPTWALSKLPPLK 432
>ref|XP_002529526.1| hypothetical protein RCOM_1716690 [Ricinus communis]
gi|223531010|gb|EEF32864.1| hypothetical protein
RCOM_1716690 [Ricinus communis]
Length = 281
Score = 244 bits (623), Expect = 5e-62
Identities = 111/211 (52%), Positives = 148/211 (70%), Gaps = 4/211 (1%)
Frame = +2
Query: 809 LDQSLLDLITNPQEWWDIRLKQVNSASPAFEHKVDGKLVHINESTPDWIKKELESLKFDR 988
++QS DL+T+P EWWDIR + N +FE K +G+L++I+ +TP WI+++LE + FD+
Sbjct: 65 VEQSWKDLLTSPHEWWDIRSQVDNPKGASFERKKNGELLYIDHATPKWIQEKLEGMAFDK 124
Query: 989 RTEKKSSKDGRASMNNSGDLILNSWRDLLKNSKQWRDYRENKLRGLVKPKYPDFKHKDSD 1168
+T + + G+ SM +GD +LNSWR+L + KQW DYR +KL GLV PK+PDFK KD D
Sbjct: 125 KT---TVEGGKGSMIKNGDSVLNSWRELASDPKQWWDYRSSKLNGLVNPKHPDFKRKDGD 181
Query: 1169 AALWLDSAPEWVLPGLKGLEFDAPLQKGKKA----DDDTWKDLVENSEKWWDNRLNKKNP 1336
ALWL+ AP W+L L+ LEFD + K K+ D W DLV + KWWDNRLNKKN
Sbjct: 182 VALWLNKAPRWILSELEKLEFDVQIPKSKQVKQHKGDANWTDLVGHPNKWWDNRLNKKNE 241
Query: 1337 KSPDFKHKDLGTGLWLSDSPAWALSKLPPQK 1429
+ PDFKHK+ G GLWLS+SP W LS+LPP K
Sbjct: 242 RYPDFKHKETGVGLWLSNSPTWVLSELPPMK 272
Score = 86.7 bits (213), Expect = 2e-14
Identities = 77/268 (28%), Positives = 114/268 (42%), Gaps = 43/268 (16%)
Frame = +2
Query: 548 QLSADSPPSALKCEQSSLQVMVH-------NVNFVEG---------SSWKKNFSDPKILV 679
Q SA P + + E+ +LQ N+ FV G SWK + P
Sbjct: 21 QSSAHGSPKSSEPERETLQKCAKRSSQEEANITFVAGIAKGDEYVEQSWKDLLTSPHEWW 80
Query: 680 PLESFKTDNASQKKVSRNDDYQR-----------KESADDSTFQKKESTEEFK------- 805
+ S + DN R + + +E + F KK + E K
Sbjct: 81 DIRS-QVDNPKGASFERKKNGELLYIDHATPKWIQEKLEGMAFDKKTTVEGGKGSMIKNG 139
Query: 806 --ILDQSLLDLITNPQEWWDIRLKQ----VNSASPAFEHKVDGKLVHINESTPDWIKKEL 967
+L+ S +L ++P++WWD R + VN P F+ K DG + P WI EL
Sbjct: 140 DSVLN-SWRELASDPKQWWDYRSSKLNGLVNPKHPDFKRK-DGDVALWLNKAPRWILSEL 197
Query: 968 ESLKFDRRTEKKSSKDGRASMNNSGDLILNSWRDLLKNSKQWRDYRENKLRGLVKPKYPD 1147
E L+FD + K + + GD +W DL+ + +W D R NK +YPD
Sbjct: 198 EKLEFDVQIPKS-----KQVKQHKGDA---NWTDLVGHPNKWWDNRLNKKN----ERYPD 245
Query: 1148 FKHKDSDAALWLDSAPEWV---LPGLKG 1222
FKHK++ LWL ++P WV LP +KG
Sbjct: 246 FKHKETGVGLWLSNSPTWVLSELPPMKG 273