BLASTX nr result

ID: Cnidium21_contig00008548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008548
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266482.1| PREDICTED: general transcription factor IIH ...   110   2e-22
ref|NP_001060068.1| Os07g0573600 [Oryza sativa Japonica Group] g...   108   1e-21
gb|EEC78671.1| hypothetical protein OsI_18797 [Oryza sativa Indi...   108   1e-21
ref|XP_002329886.1| predicted protein [Populus trichocarpa] gi|2...   106   5e-21
ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like ...   105   6e-21

>ref|XP_002266482.1| PREDICTED: general transcription factor IIH subunit 5 [Vitis
           vinifera] gi|297742669|emb|CBI34818.3| unnamed protein
           product [Vitis vinifera]
          Length = 70

 Score =  110 bits (276), Expect = 2e-22
 Identities = 53/70 (75%), Positives = 60/70 (85%)
 Frame = -1

Query: 484 MVNIIKGLYISCDIPMAQFIINMNAALPQSQKFILHVLDDTHLFVRSDMAGSIRDKISEF 305
           MVN  KGL+ISCDIPMAQFIINMNA++P SQKFI+HVLD THLFV+  +A  IR  ISEF
Sbjct: 1   MVNATKGLFISCDIPMAQFIINMNASMPASQKFIIHVLDSTHLFVQPHVAEMIRSAISEF 60

Query: 304 REQNTYEKPA 275
           REQN+YEKPA
Sbjct: 61  REQNSYEKPA 70


>ref|NP_001060068.1| Os07g0573600 [Oryza sativa Japonica Group]
           gi|34393555|dbj|BAC83153.1| unknown protein [Oryza
           sativa Japonica Group] gi|113611604|dbj|BAF21982.1|
           Os07g0573600 [Oryza sativa Japonica Group]
           gi|215707252|dbj|BAG93712.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218199880|gb|EEC82307.1| hypothetical protein
           OsI_26568 [Oryza sativa Indica Group]
           gi|222637319|gb|EEE67451.1| hypothetical protein
           OsJ_24828 [Oryza sativa Japonica Group]
          Length = 131

 Score =  108 bits (269), Expect = 1e-21
 Identities = 48/72 (66%), Positives = 62/72 (86%)
 Frame = -1

Query: 493 SDTMVNIIKGLYISCDIPMAQFIINMNAALPQSQKFILHVLDDTHLFVRSDMAGSIRDKI 314
           ++ MVN IKGL+ISCD+PMAQFI+N+NA++P S KFILH+LD TH+FV+  +A  IR KI
Sbjct: 59  AENMVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHMLDPTHMFVQPHVAEMIRSKI 118

Query: 313 SEFREQNTYEKP 278
           SEFR+QN+YEKP
Sbjct: 119 SEFRDQNSYEKP 130


>gb|EEC78671.1| hypothetical protein OsI_18797 [Oryza sativa Indica Group]
           gi|222630525|gb|EEE62657.1| hypothetical protein
           OsJ_17460 [Oryza sativa Japonica Group]
          Length = 81

 Score =  108 bits (269), Expect = 1e-21
 Identities = 50/77 (64%), Positives = 62/77 (80%)
 Frame = -1

Query: 508 FVKVASDTMVNIIKGLYISCDIPMAQFIINMNAALPQSQKFILHVLDDTHLFVRSDMAGS 329
           F    S  MVN IKGL+ISCD+PMAQFI+N+NA++P S KFILH+LD TH+FV+  +A  
Sbjct: 4   FCSPKSRNMVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHMLDPTHMFVQPHVAEM 63

Query: 328 IRDKISEFREQNTYEKP 278
           IR KISEFR+QN+YEKP
Sbjct: 64  IRGKISEFRDQNSYEKP 80


>ref|XP_002329886.1| predicted protein [Populus trichocarpa] gi|222871123|gb|EEF08254.1|
           predicted protein [Populus trichocarpa]
          Length = 70

 Score =  106 bits (264), Expect = 5e-21
 Identities = 48/70 (68%), Positives = 60/70 (85%)
 Frame = -1

Query: 484 MVNIIKGLYISCDIPMAQFIINMNAALPQSQKFILHVLDDTHLFVRSDMAGSIRDKISEF 305
           MVN  KGL+ISCDIPMAQFIIN+NA+LP SQKFI+H+LD TH+FV+  ++  IR  IS+F
Sbjct: 1   MVNATKGLFISCDIPMAQFIINLNASLPASQKFIIHILDSTHMFVQPHVSDMIRSAISDF 60

Query: 304 REQNTYEKPA 275
           REQN+YEKP+
Sbjct: 61  REQNSYEKPS 70


>ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like [Brachypodium
           distachyon]
          Length = 457

 Score =  105 bits (263), Expect = 6e-21
 Identities = 50/86 (58%), Positives = 67/86 (77%)
 Frame = -1

Query: 484 MVNIIKGLYISCDIPMAQFIINMNAALPQSQKFILHVLDDTHLFVRSDMAGSIRDKISEF 305
           MVN IKGL+ISCD+PMAQFI+N+NA++P S+KFI+H+LD TH+FV+  +   IR KI+EF
Sbjct: 1   MVNAIKGLFISCDVPMAQFIVNLNASMPASEKFIVHMLDPTHMFVQPHVGEMIRSKIAEF 60

Query: 304 REQNTYEKPA*FFFCQKKIKNTKVPS 227
           R+QN+YEKP      Q +I NT + S
Sbjct: 61  RDQNSYEKPT--SIAQTEITNTCILS 84


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