BLASTX nr result

ID: Cnidium21_contig00008526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008526
         (884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518855.1| structural constituent of ribosome, putative...   240   3e-61
gb|AFK44002.1| unknown [Lotus japonicus]                              235   9e-60
ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycin...   234   3e-59
ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycin...   230   4e-58
ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, c...   229   8e-58

>ref|XP_002518855.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223541842|gb|EEF43388.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 205

 Score =  240 bits (613), Expect = 3e-61
 Identities = 123/168 (73%), Positives = 139/168 (82%)
 Frame = -1

Query: 695 SHTFLKKNPPGSLSIKAQTLXXXXXXXXXXXXXXXXDPPSIGGVGLVTAVEEKEEPQCPP 516
           +HT  K++   SL+IK+Q L                DPP++ G G+ TAVE+KE PQCPP
Sbjct: 39  AHTIKKRHSVRSLTIKSQALDFSGSFYEGSGFGSEEDPPTLTGSGM-TAVEDKEPPQCPP 97

Query: 515 GLRQYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYIEVFNRGVIPLAYSIKKKNKAG 336
           GLRQYETMAVLRPDMSEDERL LTQKYEELLVAGGGMY+EVFNRGVIPLAYSIKKKNKAG
Sbjct: 98  GLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAG 157

Query: 335 ETNTYLDGIYLLFTYFTKPESMEVLEETLITDDNVIRSSTFKIRKRKY 192
           ETNTYLDGIYLLFTYFTKPES+E+LE TL TDD++IRSS+FKIRKRK+
Sbjct: 158 ETNTYLDGIYLLFTYFTKPESIEMLEATLNTDDDIIRSSSFKIRKRKF 205


>gb|AFK44002.1| unknown [Lotus japonicus]
          Length = 209

 Score =  235 bits (600), Expect = 9e-60
 Identities = 125/169 (73%), Positives = 135/169 (79%)
 Frame = -1

Query: 698 KSHTFLKKNPPGSLSIKAQTLXXXXXXXXXXXXXXXXDPPSIGGVGLVTAVEEKEEPQCP 519
           KSH + KKN    LS+KAQTL                   S  G GL TA EEKEEPQCP
Sbjct: 45  KSHCYQKKND-SVLSVKAQTLDFTDSFFEGGLGSEDDLNSS--GTGL-TATEEKEEPQCP 100

Query: 518 PGLRQYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYIEVFNRGVIPLAYSIKKKNKA 339
           PGLRQYETMAVLRPDMSEDERL LTQKYEELLVAGGGMY+EVFNRGVIPLAYSIKKKNKA
Sbjct: 101 PGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKA 160

Query: 338 GETNTYLDGIYLLFTYFTKPESMEVLEETLITDDNVIRSSTFKIRKRKY 192
           GETNTYLDGIYLL+TYFTKPES+  LEETL+ DD+V+RS+TFKI+KRKY
Sbjct: 161 GETNTYLDGIYLLYTYFTKPESIVALEETLLADDDVLRSTTFKIKKRKY 209


>ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycine max]
           gi|255625673|gb|ACU13181.1| unknown [Glycine max]
          Length = 214

 Score =  234 bits (596), Expect = 3e-59
 Identities = 125/169 (73%), Positives = 134/169 (79%)
 Frame = -1

Query: 698 KSHTFLKKNPPGSLSIKAQTLXXXXXXXXXXXXXXXXDPPSIGGVGLVTAVEEKEEPQCP 519
           KSH + K+N  G  SI+AQTL                 P S GG G  T VEEKEEPQCP
Sbjct: 49  KSHFYPKRNDHG-FSIRAQTLDFSDSFFEGGFGSEDD-PSSPGGPGF-TGVEEKEEPQCP 105

Query: 518 PGLRQYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYIEVFNRGVIPLAYSIKKKNKA 339
           PGLRQYETM VLRPDMSEDERL LTQKYEE+LVAGGGMY+EVFNRGVIPLAYSIKKKNKA
Sbjct: 106 PGLRQYETMMVLRPDMSEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYSIKKKNKA 165

Query: 338 GETNTYLDGIYLLFTYFTKPESMEVLEETLITDDNVIRSSTFKIRKRKY 192
           GETNTYLDGIYLLFTYFTKPES+  LEET++TDDNVIRS + KIRKRKY
Sbjct: 166 GETNTYLDGIYLLFTYFTKPESITPLEETMLTDDNVIRSMSSKIRKRKY 214


>ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycine max]
           gi|255628961|gb|ACU14825.1| unknown [Glycine max]
          Length = 214

 Score =  230 bits (586), Expect = 4e-58
 Identities = 124/167 (74%), Positives = 132/167 (79%)
 Frame = -1

Query: 692 HTFLKKNPPGSLSIKAQTLXXXXXXXXXXXXXXXXDPPSIGGVGLVTAVEEKEEPQCPPG 513
           H   K+N  G  SI+AQTL                 P S GG G  TAVEEKEEPQCPPG
Sbjct: 51  HFHPKRNDYG-FSIRAQTLDFSDSFFEGGFGSEDV-PSSPGGPGF-TAVEEKEEPQCPPG 107

Query: 512 LRQYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYIEVFNRGVIPLAYSIKKKNKAGE 333
           LRQYETM VLRPDMSEDERL LTQKYEE+LVAGGGMY+EVFNRGVIPLAYSIKKKNKAGE
Sbjct: 108 LRQYETMMVLRPDMSEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGE 167

Query: 332 TNTYLDGIYLLFTYFTKPESMEVLEETLITDDNVIRSSTFKIRKRKY 192
           TNTYLDGIYLLFTYFTKPES+  LEET++TDDNVIRS + KIRKRKY
Sbjct: 168 TNTYLDGIYLLFTYFTKPESITPLEETMLTDDNVIRSMSSKIRKRKY 214


>ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic [Vitis
           vinifera]
          Length = 199

 Score =  229 bits (583), Expect = 8e-58
 Identities = 124/177 (70%), Positives = 133/177 (75%)
 Frame = -1

Query: 722 TIYKSFSPKSHTFLKKNPPGSLSIKAQTLXXXXXXXXXXXXXXXXDPPSIGGVGLVTAVE 543
           T +  FS K            LSI+A TL                 P S  G G + AVE
Sbjct: 25  TSFTVFSGKQRFIYHPRRAPGLSIRALTLDFSGSFFEGGFGSDDD-PNSPPGPG-IAAVE 82

Query: 542 EKEEPQCPPGLRQYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYIEVFNRGVIPLAY 363
           +K+EPQCPPGLRQYETMAVLRPDMSEDERL LTQKYEELLVAGGGMY+EVFNRGVIPLAY
Sbjct: 83  DKDEPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAY 142

Query: 362 SIKKKNKAGETNTYLDGIYLLFTYFTKPESMEVLEETLITDDNVIRSSTFKIRKRKY 192
           SIKKKNKAGE+NTYLDGIYLLFTYFTKPESMEVLE TL  DD+VIRSS+FKIRKRKY
Sbjct: 143 SIKKKNKAGESNTYLDGIYLLFTYFTKPESMEVLEATLTADDDVIRSSSFKIRKRKY 199


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