BLASTX nr result

ID: Cnidium21_contig00008512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008512
         (1275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_683567.1| ubiquitin-protein ligase RFWD2 [Arabidopsis tha...    80   9e-13
ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glyc...    78   6e-12
ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glyc...    78   6e-12
ref|XP_002972851.1| hypothetical protein SELMODRAFT_98534 [Selag...    77   7e-12
ref|XP_002984423.1| hypothetical protein SELMODRAFT_181056 [Sela...    77   7e-12

>ref|NP_683567.1| ubiquitin-protein ligase RFWD2 [Arabidopsis thaliana]
           gi|332642126|gb|AEE75647.1| ubiquitin-protein ligase
           RFWD2 [Arabidopsis thaliana]
          Length = 837

 Score = 80.5 bits (197), Expect = 9e-13
 Identities = 48/101 (47%), Positives = 52/101 (51%), Gaps = 41/101 (40%)
 Frame = -3

Query: 805 DIHYFVVEMSSKSKLSSICWNGYIKSHIASSNFDGVVQ---------------------- 692
           DIHY VVE++ +SKLSS+CWN YIKS IASSNFDGVVQ                      
Sbjct: 572 DIHYPVVELAGRSKLSSLCWNSYIKSQIASSNFDGVVQIWDVARSQLVTEMKEHKKRVWS 631

Query: 691 -------------------GASAATIKTKANV*CVQFPSDS 626
                              G S  TIKTKANV CVQFPSDS
Sbjct: 632 IDISSADPTLLASGSDDGTGVSIGTIKTKANVCCVQFPSDS 672


>ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
          Length = 892

 Score = 77.8 bits (190), Expect = 6e-12
 Identities = 50/111 (45%), Positives = 53/111 (47%), Gaps = 49/111 (44%)
 Frame = -3

Query: 811 DCDIHYFVVEMSSKSKLSSICWNGYIKSHIASSNFDGVV--------------------- 695
           D DIHY VVEM+S+SKLSSICWN YIKS IASSNF+GVV                     
Sbjct: 618 DRDIHYPVVEMASRSKLSSICWNTYIKSQIASSNFEGVVQLWDVTRSQVISEMREHERRV 677

Query: 694 ----------------------------QGASAATIKTKANV*CVQFPSDS 626
                                       QG S  TIKTKANV CVQFP DS
Sbjct: 678 WSIDFSSADPTMLASGSDDGSVKLWSINQGVSVGTIKTKANVCCVQFPLDS 728


>ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
          Length = 892

 Score = 77.8 bits (190), Expect = 6e-12
 Identities = 50/111 (45%), Positives = 53/111 (47%), Gaps = 49/111 (44%)
 Frame = -3

Query: 811 DCDIHYFVVEMSSKSKLSSICWNGYIKSHIASSNFDGVV--------------------- 695
           D DIHY VVEM+S+SKLSSICWN YIKS IASSNF+GVV                     
Sbjct: 617 DRDIHYPVVEMASRSKLSSICWNTYIKSQIASSNFEGVVQLWDVTRSQVISEMREHERRV 676

Query: 694 ----------------------------QGASAATIKTKANV*CVQFPSDS 626
                                       QG S  TIKTKANV CVQFP DS
Sbjct: 677 WSIDFSSADPTMLASGSDDGSVKLWSINQGVSVGTIKTKANVCCVQFPLDS 727


>ref|XP_002972851.1| hypothetical protein SELMODRAFT_98534 [Selaginella moellendorffii]
           gi|300159452|gb|EFJ26072.1| hypothetical protein
           SELMODRAFT_98534 [Selaginella moellendorffii]
          Length = 731

 Score = 77.4 bits (189), Expect = 7e-12
 Identities = 47/109 (43%), Positives = 54/109 (49%), Gaps = 49/109 (44%)
 Frame = -3

Query: 805 DIHYFVVEMSSKSKLSSICWNGYIKSHIASSNFDGVV----------------------- 695
           DIHY VVEM+S+SKLS+ICWN YIKSH+ASS++DGV+                       
Sbjct: 456 DIHYPVVEMASRSKLSNICWNSYIKSHLASSDYDGVIQLWDASTSQTLVEYKEHEKRAWS 515

Query: 694 --------------------------QGASAATIKTKANV*CVQFPSDS 626
                                     Q AS  TIKTKANV CVQFPSDS
Sbjct: 516 VDFSHADPTKLASGSDDGTVKLWSINQEASTGTIKTKANVCCVQFPSDS 564


>ref|XP_002984423.1| hypothetical protein SELMODRAFT_181056 [Selaginella moellendorffii]
           gi|300147811|gb|EFJ14473.1| hypothetical protein
           SELMODRAFT_181056 [Selaginella moellendorffii]
          Length = 731

 Score = 77.4 bits (189), Expect = 7e-12
 Identities = 47/109 (43%), Positives = 54/109 (49%), Gaps = 49/109 (44%)
 Frame = -3

Query: 805 DIHYFVVEMSSKSKLSSICWNGYIKSHIASSNFDGVV----------------------- 695
           DIHY VVEM+S+SKLS+ICWN YIKSH+ASS++DGV+                       
Sbjct: 456 DIHYPVVEMASRSKLSNICWNSYIKSHLASSDYDGVIQLWDASTSQTLVEYKEHEKRAWS 515

Query: 694 --------------------------QGASAATIKTKANV*CVQFPSDS 626
                                     Q AS  TIKTKANV CVQFPSDS
Sbjct: 516 VDFSHADPTKLASGSDDGTVKLWSINQEASTGTIKTKANVCCVQFPSDS 564


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