BLASTX nr result

ID: Cnidium21_contig00008506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008506
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141639.1| PREDICTED: F-box/FBD/LRR-repeat protein At2g...    68   8e-10
gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza...    64   1e-08
gb|EEC66519.1| hypothetical protein OsI_32638 [Oryza sativa Indi...    64   1e-08
ref|NP_001064090.1| Os10g0128200 [Oryza sativa Japonica Group] g...    64   1e-08
gb|AAP51971.2| F-box domain containing protein, expressed [Oryza...    64   1e-08

>ref|XP_004141639.1| PREDICTED: F-box/FBD/LRR-repeat protein At2g26030-like [Cucumis
           sativus]
          Length = 365

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 30/63 (47%), Positives = 41/63 (65%)
 Frame = -2

Query: 469 KKARMQDEDRISKLPDELLHQVMSFMDARFAVQTSALSKRWMLVWTTLPFLNIHYLEEYE 290
           +K+   +EDRIS LPD LLH+++SF++ +  VQT  LSKRW  +WT +P LN  Y   Y 
Sbjct: 4   RKSTQTEEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYS 63

Query: 289 LMI 281
             I
Sbjct: 64  FSI 66


>gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza sativa Japonica Group]
          Length = 1803

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/49 (55%), Positives = 39/49 (79%)
 Frame = -2

Query: 445  DRISKLPDELLHQVMSFMDARFAVQTSALSKRWMLVWTTLPFLNIHYLE 299
            DR+S LPDE+LH++MSF++AR AVQT  LS+RW  +W T+P +N  ++E
Sbjct: 1424 DRLSDLPDEILHRIMSFLNARQAVQTCVLSRRWRNLWHTVPCINADFVE 1472


>gb|EEC66519.1| hypothetical protein OsI_32638 [Oryza sativa Indica Group]
          Length = 411

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/49 (55%), Positives = 39/49 (79%)
 Frame = -2

Query: 445 DRISKLPDELLHQVMSFMDARFAVQTSALSKRWMLVWTTLPFLNIHYLE 299
           DR+S LPDE+LH++MSF++AR AVQT  LS+RW  +W T+P +N  ++E
Sbjct: 16  DRLSDLPDEILHRIMSFLNARQAVQTCVLSRRWRNLWHTVPCINADFVE 64


>ref|NP_001064090.1| Os10g0128200 [Oryza sativa Japonica Group]
           gi|113638699|dbj|BAF26004.1| Os10g0128200, partial
           [Oryza sativa Japonica Group]
          Length = 421

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/49 (55%), Positives = 39/49 (79%)
 Frame = -2

Query: 445 DRISKLPDELLHQVMSFMDARFAVQTSALSKRWMLVWTTLPFLNIHYLE 299
           DR+S LPDE+LH++MSF++AR AVQT  LS+RW  +W T+P +N  ++E
Sbjct: 26  DRLSDLPDEILHRIMSFLNARQAVQTCVLSRRWRNLWHTVPCINADFVE 74


>gb|AAP51971.2| F-box domain containing protein, expressed [Oryza sativa Japonica
           Group] gi|222612381|gb|EEE50513.1| hypothetical protein
           OsJ_30603 [Oryza sativa Japonica Group]
          Length = 411

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/49 (55%), Positives = 39/49 (79%)
 Frame = -2

Query: 445 DRISKLPDELLHQVMSFMDARFAVQTSALSKRWMLVWTTLPFLNIHYLE 299
           DR+S LPDE+LH++MSF++AR AVQT  LS+RW  +W T+P +N  ++E
Sbjct: 16  DRLSDLPDEILHRIMSFLNARQAVQTCVLSRRWRNLWHTVPCINADFVE 64


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