BLASTX nr result

ID: Cnidium21_contig00008482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008482
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513634.1| NADH dehydrogenase, putative [Ricinus commun...   150   1e-34
ref|XP_004140748.1| PREDICTED: probable NADH dehydrogenase [ubiq...   149   2e-34
ref|XP_002276087.1| PREDICTED: probable NADH dehydrogenase [ubiq...   149   2e-34
ref|XP_002864198.1| hypothetical protein ARALYDRAFT_495348 [Arab...   145   4e-33
ref|XP_002305272.1| predicted protein [Populus trichocarpa] gi|1...   142   2e-32

>ref|XP_002513634.1| NADH dehydrogenase, putative [Ricinus communis]
           gi|223547542|gb|EEF49037.1| NADH dehydrogenase, putative
           [Ricinus communis]
          Length = 166

 Score =  150 bits (378), Expect = 1e-34
 Identities = 74/86 (86%), Positives = 80/86 (93%)
 Frame = +3

Query: 6   MFLRRFTRPLMMMAKVKETTGIVGLDVVPNARQVLINLYNKTLKEIQAVPEDEGYRKAVE 185
           MFLR   RPLM  A+VK+TTGIVGLDVVPNAR+VLI+LYNKTLKEIQAVPEDEGYRKAVE
Sbjct: 1   MFLRVIARPLM--ARVKQTTGIVGLDVVPNAREVLISLYNKTLKEIQAVPEDEGYRKAVE 58

Query: 186 SFTRHRLKVCQEEEDWEAIEKRLGCG 263
           SFT+HRLKVCQEEEDWE IEK+LGCG
Sbjct: 59  SFTKHRLKVCQEEEDWEMIEKKLGCG 84


>ref|XP_004140748.1| PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha
           subcomplex subunit 5, mitochondrial-like [Cucumis
           sativus] gi|449485470|ref|XP_004157179.1| PREDICTED:
           probable NADH dehydrogenase [ubiquinone] 1 alpha
           subcomplex subunit 5, mitochondrial-like [Cucumis
           sativus]
          Length = 168

 Score =  149 bits (377), Expect = 2e-34
 Identities = 75/86 (87%), Positives = 79/86 (91%)
 Frame = +3

Query: 6   MFLRRFTRPLMMMAKVKETTGIVGLDVVPNARQVLINLYNKTLKEIQAVPEDEGYRKAVE 185
           MFLR   RPL+  AKVK+TTGIVGLDVVPNAR+VLI LY+KTLKEIQAVPEDEGYRKAVE
Sbjct: 1   MFLRAIGRPLL--AKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVE 58

Query: 186 SFTRHRLKVCQEEEDWEAIEKRLGCG 263
           SFTRHRLKVCQEEEDWE IEKRLGCG
Sbjct: 59  SFTRHRLKVCQEEEDWENIEKRLGCG 84


>ref|XP_002276087.1| PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha
           subcomplex subunit 5, mitochondrial [Vitis vinifera]
           gi|302143765|emb|CBI22626.3| unnamed protein product
           [Vitis vinifera]
          Length = 169

 Score =  149 bits (377), Expect = 2e-34
 Identities = 75/86 (87%), Positives = 77/86 (89%)
 Frame = +3

Query: 6   MFLRRFTRPLMMMAKVKETTGIVGLDVVPNARQVLINLYNKTLKEIQAVPEDEGYRKAVE 185
           MFLRR  RPLM  AKVKETTGIVGLDVVPNAR+VLI+LY KTL EIQ VPEDEGYRKAVE
Sbjct: 1   MFLRRIARPLM--AKVKETTGIVGLDVVPNAREVLISLYTKTLNEIQTVPEDEGYRKAVE 58

Query: 186 SFTRHRLKVCQEEEDWEAIEKRLGCG 263
           SFT HRLKVCQEEEDWE IEKRLGCG
Sbjct: 59  SFTSHRLKVCQEEEDWEQIEKRLGCG 84


>ref|XP_002864198.1| hypothetical protein ARALYDRAFT_495348 [Arabidopsis lyrata subsp.
           lyrata] gi|297310033|gb|EFH40457.1| hypothetical protein
           ARALYDRAFT_495348 [Arabidopsis lyrata subsp. lyrata]
          Length = 169

 Score =  145 bits (365), Expect = 4e-33
 Identities = 72/86 (83%), Positives = 78/86 (90%)
 Frame = +3

Query: 6   MFLRRFTRPLMMMAKVKETTGIVGLDVVPNARQVLINLYNKTLKEIQAVPEDEGYRKAVE 185
           MFLR   RPL+  AKVK+TTGIVGLDVVPNAR VLI+LY+KTLKEIQAVPEDEGYRK+VE
Sbjct: 1   MFLRAIGRPLL--AKVKQTTGIVGLDVVPNARAVLIDLYSKTLKEIQAVPEDEGYRKSVE 58

Query: 186 SFTRHRLKVCQEEEDWEAIEKRLGCG 263
           SFTRHRL VC+EEEDWE IEKRLGCG
Sbjct: 59  SFTRHRLNVCKEEEDWEVIEKRLGCG 84


>ref|XP_002305272.1| predicted protein [Populus trichocarpa] gi|118481537|gb|ABK92711.1|
           unknown [Populus trichocarpa]
           gi|222848236|gb|EEE85783.1| predicted protein [Populus
           trichocarpa]
          Length = 171

 Score =  142 bits (359), Expect = 2e-32
 Identities = 70/86 (81%), Positives = 77/86 (89%)
 Frame = +3

Query: 6   MFLRRFTRPLMMMAKVKETTGIVGLDVVPNARQVLINLYNKTLKEIQAVPEDEGYRKAVE 185
           MFLR   RPL+  AKVK+TTGIVGLDV PNAR+VLINLYNKTLKEI+AVPEDEGYRKAVE
Sbjct: 1   MFLRAIGRPLL--AKVKQTTGIVGLDVAPNAREVLINLYNKTLKEIKAVPEDEGYRKAVE 58

Query: 186 SFTRHRLKVCQEEEDWEAIEKRLGCG 263
           SFT HRLKVC+EE DWE IE+R+GCG
Sbjct: 59  SFTTHRLKVCEEEVDWEKIEERIGCG 84


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