BLASTX nr result

ID: Cnidium21_contig00008472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008472
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549500.1| PREDICTED: small nuclear ribonucleoprotein E...   109   3e-22
ref|XP_001766402.1| predicted protein [Physcomitrella patens sub...   108   3e-22
ref|XP_002966380.1| hypothetical protein SELMODRAFT_230895 [Sela...   108   5e-22
ref|XP_003542280.1| PREDICTED: small nuclear ribonucleoprotein E...   108   6e-22
ref|XP_003523208.1| PREDICTED: small nuclear ribonucleoprotein E...   107   8e-22

>ref|XP_003549500.1| PREDICTED: small nuclear ribonucleoprotein E [Glycine max]
           gi|255628153|gb|ACU14421.1| unknown [Glycine max]
          Length = 88

 Score =  109 bits (272), Expect = 3e-22
 Identities = 55/56 (98%), Positives = 55/56 (98%)
 Frame = +1

Query: 1   EQKDLRIEGRIIGFDEYMNLVLDDAEEVSIKKKSRKPLGRILLKGDNITLMMNTGK 168
           EQKDLRIEGRIIGFDEYMNLVLDDAEEVSIKKKSRK LGRILLKGDNITLMMNTGK
Sbjct: 33  EQKDLRIEGRIIGFDEYMNLVLDDAEEVSIKKKSRKTLGRILLKGDNITLMMNTGK 88


>ref|XP_001766402.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|168048491|ref|XP_001776700.1| predicted protein
           [Physcomitrella patens subsp. patens]
           gi|162671992|gb|EDQ58536.1| predicted protein
           [Physcomitrella patens subsp. patens]
           gi|162682311|gb|EDQ68730.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 87

 Score =  108 bits (271), Expect = 3e-22
 Identities = 53/56 (94%), Positives = 56/56 (100%)
 Frame = +1

Query: 1   EQKDLRIEGRIIGFDEYMNLVLDDAEEVSIKKKSRKPLGRILLKGDNITLMMNTGK 168
           EQKDLRIEGRIIGFDEYMNLVLD+AEEVS+KKK+RKPLGRILLKGDNITLMMNTGK
Sbjct: 32  EQKDLRIEGRIIGFDEYMNLVLDEAEEVSLKKKTRKPLGRILLKGDNITLMMNTGK 87


>ref|XP_002966380.1| hypothetical protein SELMODRAFT_230895 [Selaginella moellendorffii]
           gi|302792841|ref|XP_002978186.1| hypothetical protein
           SELMODRAFT_176675 [Selaginella moellendorffii]
           gi|300154207|gb|EFJ20843.1| hypothetical protein
           SELMODRAFT_176675 [Selaginella moellendorffii]
           gi|300165800|gb|EFJ32407.1| hypothetical protein
           SELMODRAFT_230895 [Selaginella moellendorffii]
          Length = 88

 Score =  108 bits (270), Expect = 5e-22
 Identities = 53/56 (94%), Positives = 55/56 (98%)
 Frame = +1

Query: 1   EQKDLRIEGRIIGFDEYMNLVLDDAEEVSIKKKSRKPLGRILLKGDNITLMMNTGK 168
           EQKDLRIEGRIIGFDEYMNLVLDDA E+S+KKKSRKPLGRILLKGDNITLMMNTGK
Sbjct: 33  EQKDLRIEGRIIGFDEYMNLVLDDAYEISLKKKSRKPLGRILLKGDNITLMMNTGK 88


>ref|XP_003542280.1| PREDICTED: small nuclear ribonucleoprotein E-like [Glycine max]
           gi|255627911|gb|ACU14300.1| unknown [Glycine max]
          Length = 88

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/56 (96%), Positives = 55/56 (98%)
 Frame = +1

Query: 1   EQKDLRIEGRIIGFDEYMNLVLDDAEEVSIKKKSRKPLGRILLKGDNITLMMNTGK 168
           EQKDLRIEGRIIGFDEYMNLVLDDAEEV+IKKKSRK LGRILLKGDNITLMMNTGK
Sbjct: 33  EQKDLRIEGRIIGFDEYMNLVLDDAEEVNIKKKSRKTLGRILLKGDNITLMMNTGK 88


>ref|XP_003523208.1| PREDICTED: small nuclear ribonucleoprotein E-like [Glycine max]
           gi|356516401|ref|XP_003526883.1| PREDICTED: small
           nuclear ribonucleoprotein E [Glycine max]
           gi|388501720|gb|AFK38926.1| unknown [Lotus japonicus]
          Length = 88

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/56 (94%), Positives = 55/56 (98%)
 Frame = +1

Query: 1   EQKDLRIEGRIIGFDEYMNLVLDDAEEVSIKKKSRKPLGRILLKGDNITLMMNTGK 168
           EQKDLRIEGRIIGFDEYMNLVLDDAEEV++KKKSRK LGRILLKGDNITLMMNTGK
Sbjct: 33  EQKDLRIEGRIIGFDEYMNLVLDDAEEVNVKKKSRKTLGRILLKGDNITLMMNTGK 88


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