BLASTX nr result

ID: Cnidium21_contig00008471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008471
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis...   211   5e-53
ref|XP_003537249.1| PREDICTED: 60S ribosomal protein L4-1-like i...   211   6e-53
ref|XP_003537248.1| PREDICTED: 60S ribosomal protein L4-1-like i...   211   6e-53
ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [...   209   1e-52
sp|Q9XF97.1|RL4_PRUAR RecName: Full=60S ribosomal protein L4; Al...   209   2e-52

>ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis vinifera]
          Length = 405

 Score =  211 bits (537), Expect = 5e-53
 Identities = 101/151 (66%), Positives = 120/151 (79%)
 Frame = -3

Query: 455 MAASSRPVVTIQXXXXXXXXXXXXXXXXXXDVMKSSIRPDLVSFIHSEMSNNSRQPYAVS 276
           MAA++RP+VT+Q                   VMK+SIRPD+V+F+HS +S NSRQPYAVS
Sbjct: 1   MAAAARPLVTVQVLKSDMATDGGNAVPLPD-VMKASIRPDIVNFVHSNISKNSRQPYAVS 59

Query: 275 RKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTRIWRKWHSRI 96
           R+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWR+WH +I
Sbjct: 60  RRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 119

Query: 95  NINQKRFXXXXXXXXXSVPSLVMARGHKIDN 3
           N+NQKR+         +VPSLVMARGH+I++
Sbjct: 120 NVNQKRYAVVSAIAASAVPSLVMARGHRIES 150


>ref|XP_003537249.1| PREDICTED: 60S ribosomal protein L4-1-like isoform 2 [Glycine max]
          Length = 371

 Score =  211 bits (536), Expect = 6e-53
 Identities = 100/151 (66%), Positives = 120/151 (79%)
 Frame = -3

Query: 455 MAASSRPVVTIQXXXXXXXXXXXXXXXXXXDVMKSSIRPDLVSFIHSEMSNNSRQPYAVS 276
           MAA++RP+VT+Q                   VMKSSIRPD+V+F+HS +S NSRQPYAVS
Sbjct: 1   MAAAARPLVTVQALDSDMATDASATVPIPD-VMKSSIRPDIVNFVHSNISKNSRQPYAVS 59

Query: 275 RKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTRIWRKWHSRI 96
           R+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWR+WH +I
Sbjct: 60  RRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 119

Query: 95  NINQKRFXXXXXXXXXSVPSLVMARGHKIDN 3
           N+NQKR+         ++PSLV+ARGH+I++
Sbjct: 120 NVNQKRYAVVSAIAASAIPSLVLARGHRIES 150


>ref|XP_003537248.1| PREDICTED: 60S ribosomal protein L4-1-like isoform 1 [Glycine max]
          Length = 405

 Score =  211 bits (536), Expect = 6e-53
 Identities = 100/151 (66%), Positives = 120/151 (79%)
 Frame = -3

Query: 455 MAASSRPVVTIQXXXXXXXXXXXXXXXXXXDVMKSSIRPDLVSFIHSEMSNNSRQPYAVS 276
           MAA++RP+VT+Q                   VMKSSIRPD+V+F+HS +S NSRQPYAVS
Sbjct: 1   MAAAARPLVTVQALDSDMATDASATVPIPD-VMKSSIRPDIVNFVHSNISKNSRQPYAVS 59

Query: 275 RKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTRIWRKWHSRI 96
           R+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWR+WH +I
Sbjct: 60  RRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 119

Query: 95  NINQKRFXXXXXXXXXSVPSLVMARGHKIDN 3
           N+NQKR+         ++PSLV+ARGH+I++
Sbjct: 120 NVNQKRYAVVSAIAASAIPSLVLARGHRIES 150


>ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [Glycine max]
          Length = 405

 Score =  209 bits (533), Expect = 1e-52
 Identities = 99/151 (65%), Positives = 120/151 (79%)
 Frame = -3

Query: 455 MAASSRPVVTIQXXXXXXXXXXXXXXXXXXDVMKSSIRPDLVSFIHSEMSNNSRQPYAVS 276
           MAA++RP+VT+Q                   VMK+SIRPD+V+F+HS +S NSRQPYAVS
Sbjct: 1   MAAAARPLVTVQALDGDMATDASATVPIPD-VMKASIRPDIVNFVHSNISKNSRQPYAVS 59

Query: 275 RKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTRIWRKWHSRI 96
           R+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWR+WH +I
Sbjct: 60  RRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 119

Query: 95  NINQKRFXXXXXXXXXSVPSLVMARGHKIDN 3
           N+NQKR+         ++PSLV+ARGH+I++
Sbjct: 120 NVNQKRYAVVSAIAASAIPSLVLARGHRIES 150


>sp|Q9XF97.1|RL4_PRUAR RecName: Full=60S ribosomal protein L4; AltName: Full=L1
           gi|4887131|gb|AAD32206.1|AF134732_1 60S ribosomal
           protein L1 [Prunus armeniaca]
          Length = 408

 Score =  209 bits (531), Expect = 2e-52
 Identities = 100/149 (67%), Positives = 118/149 (79%)
 Frame = -3

Query: 452 AASSRPVVTIQXXXXXXXXXXXXXXXXXXDVMKSSIRPDLVSFIHSEMSNNSRQPYAVSR 273
           AA++RP+VT+Q                   VMK+SIRPD+V+F+HS +S NSRQPYAVS+
Sbjct: 5   AAAARPLVTVQSLEGDMATDQTQTVALPD-VMKASIRPDIVTFVHSNISKNSRQPYAVSK 63

Query: 272 KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTRIWRKWHSRIN 93
           KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWR+WH +IN
Sbjct: 64  KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 123

Query: 92  INQKRFXXXXXXXXXSVPSLVMARGHKID 6
           +NQKR+         +VPSLV+ARGHKI+
Sbjct: 124 VNQKRYAVVSAIAASAVPSLVLARGHKIE 152


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