BLASTX nr result

ID: Cnidium21_contig00008447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008447
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vit...   125   9e-27
ref|XP_002313604.1| predicted protein [Populus trichocarpa] gi|2...   116   4e-24
ref|XP_002276044.1| PREDICTED: F-box protein At2g27310 [Vitis vi...   112   6e-23
ref|XP_004168870.1| PREDICTED: probable F-box protein At1g60180-...   111   2e-22
ref|XP_004140262.1| PREDICTED: probable F-box protein At1g60180-...   111   2e-22

>ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vitis vinifera]
          Length = 336

 Score =  125 bits (314), Expect = 9e-27
 Identities = 67/154 (43%), Positives = 103/154 (66%)
 Frame = -3

Query: 734 LNVSWIVIDTSGRMAANISSLRPVLVRQHWVTGDIKVRYVKVLAGGRKGKSSELVQCKIE 555
           L +SWI+ID + + AAN+SSLRPV V++HW+TG+++VRY  V+ GG +   SE+VQC I 
Sbjct: 177 LTLSWILIDPTRKRAANLSSLRPVSVKRHWLTGEVQVRYATVV-GGDRTVGSEVVQCGIV 235

Query: 554 VECVRRVENGELHVGQVSLKIEDMDKKYLSGRDSLVILQDALXXXXXXXXXXXXXXEMYE 375
           V C  + E GE+ V +V+L++EDM+ ++L+G++SLVILQ+AL                YE
Sbjct: 236 VTCAGK-EGGEMQVREVNLQVEDMEGRHLNGKESLVILQEALENGRRKKAKGEEGKARYE 294

Query: 374 KYLVKRRERREKLQKIERRLEMVDRATRISISMA 273
           +YL    ERRE+  + E+ L+MV  A  ++I ++
Sbjct: 295 RYLEMMGERRERRLRREKTLDMVCIALGVTIFLS 328


>ref|XP_002313604.1| predicted protein [Populus trichocarpa] gi|222850012|gb|EEE87559.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  116 bits (291), Expect = 4e-24
 Identities = 60/157 (38%), Positives = 102/157 (64%), Gaps = 1/157 (0%)
 Frame = -3

Query: 749 RLGRDLNVSWIVIDTSGRMAANISSLRPVLVRQHWVTGDIKVRYVKVLAGGRKGKSSELV 570
           +L  ++ +SWI+ID  GR A N+SS RPV V++HW+TG++ V++  ++AG   G+  E V
Sbjct: 180 QLEENITLSWILIDPKGRRAMNLSSERPVSVQRHWLTGEVVVKFSNIMAG--DGREKEYV 237

Query: 569 QCKIEVECVRRVENGELHVGQVSLKIEDMDKKYLSGRDSLVILQDAL-XXXXXXXXXXXX 393
           +C + V C    E GE+ V +VS+ +EDM+ K L+G+D LVILQ+A+             
Sbjct: 238 ECGVMV-CCGEKEGGEVEVREVSMVMEDMEGKNLTGKDGLVILQEAMERGERRKGKGGKE 296

Query: 392 XXEMYEKYLVKRRERREKLQKIERRLEMVDRATRISI 282
               YE+++ +++ER+E+++K+E+ L+M   AT I++
Sbjct: 297 GKGRYEEFVERKKERKERMKKLEKALDMACIATGIAV 333


>ref|XP_002276044.1| PREDICTED: F-box protein At2g27310 [Vitis vinifera]
          Length = 342

 Score =  112 bits (281), Expect = 6e-23
 Identities = 63/148 (42%), Positives = 99/148 (66%), Gaps = 1/148 (0%)
 Frame = -3

Query: 749 RLGRDLNVSWIVIDTSGRMAANISSLRPVLVRQHWVTGDIKVRYVKVLAGGRKGKSSELV 570
           +LG ++++SWIV+DT+GR AAN+SS + V V +HW++G++++R+  +L GG KG ++ELV
Sbjct: 176 KLGENISLSWIVMDTTGRRAANLSSHKAVSVERHWLSGEVQLRFASIL-GGDKG-TTELV 233

Query: 569 QCKIEVECVRRVENGELHVGQVSLKIEDMDKKYLSGRDSLVILQDALXXXXXXXXXXXXX 390
           QC I V C    + GE+ V +VSL++EDMD  +L G++SLVIL  AL             
Sbjct: 234 QCGIVVTC-DGSKTGEMQVTEVSLQLEDMDGVHLMGKESLVILHKALKGQKVKKVKREHG 292

Query: 389 XEM-YEKYLVKRRERREKLQKIERRLEM 309
               Y++YL  +RER+E+  ++E  L+M
Sbjct: 293 GREGYQEYLEMKRERKERKIRLEGTLDM 320


>ref|XP_004168870.1| PREDICTED: probable F-box protein At1g60180-like, partial [Cucumis
           sativus]
          Length = 320

 Score =  111 bits (277), Expect = 2e-22
 Identities = 57/149 (38%), Positives = 96/149 (64%), Gaps = 2/149 (1%)
 Frame = -3

Query: 746 LGRDLNVSWIVIDTSGRMAANISSLRPVLVRQHWVTGDIKVRYVKVLAGGRK-GKSSELV 570
           L  +L VSW++ID     AANISS +PV VR+HW++G+I+V+Y  V+ G R+ G + E+V
Sbjct: 172 LEENLTVSWVIIDPIKNRAANISSRQPVKVRRHWLSGEIQVQYTTVMGGDRRAGSAVEMV 231

Query: 569 QCKIEVECVRRVENG-ELHVGQVSLKIEDMDKKYLSGRDSLVILQDALXXXXXXXXXXXX 393
           +C + V C  + E G E+ V +VS+++ DM+ K+L+G+DSL IL++A+            
Sbjct: 232 ECAVVVSCGEKEEEGMEMSVTEVSMQMLDMEGKHLNGKDSLGILKEAMEKGKRISAKKGD 291

Query: 392 XXEMYEKYLVKRRERREKLQKIERRLEMV 306
               YE+Y   +++R+ + ++IE  L+M+
Sbjct: 292 GKLRYEEYEEMKKKRKARKERIENGLDML 320


>ref|XP_004140262.1| PREDICTED: probable F-box protein At1g60180-like [Cucumis sativus]
          Length = 321

 Score =  111 bits (277), Expect = 2e-22
 Identities = 57/149 (38%), Positives = 96/149 (64%), Gaps = 2/149 (1%)
 Frame = -3

Query: 746 LGRDLNVSWIVIDTSGRMAANISSLRPVLVRQHWVTGDIKVRYVKVLAGGRK-GKSSELV 570
           L  +L VSW++ID     AANISS +PV VR+HW++G+I+V+Y  V+ G R+ G + E+V
Sbjct: 172 LEENLTVSWVIIDPIKNRAANISSRQPVKVRRHWLSGEIQVQYTTVMGGDRRAGSAVEMV 231

Query: 569 QCKIEVECVRRVENG-ELHVGQVSLKIEDMDKKYLSGRDSLVILQDALXXXXXXXXXXXX 393
           +C + V C  + E G E+ V +VS+++ DM+ K+L+G+DSL IL++A+            
Sbjct: 232 ECAVVVSCGEKEEEGMEMSVTEVSMQMLDMEGKHLNGKDSLGILKEAMEKGKRISAKKGD 291

Query: 392 XXEMYEKYLVKRRERREKLQKIERRLEMV 306
               YE+Y   +++R+ + ++IE  L+M+
Sbjct: 292 GKLRYEEYEEMKKKRKARKERIENGLDML 320


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