BLASTX nr result

ID: Cnidium21_contig00008405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008405
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF43955.1|AC012188_32 Contains similarity to an unknown prot...    77   1e-12
gb|AAF63179.1|AC010657_15 T5E21.3 [Arabidopsis thaliana]               77   1e-12
gb|AAO22624.1| unknown protein [Arabidopsis thaliana]                  77   1e-12
ref|NP_563953.1| uncharacterized protein [Arabidopsis thaliana] ...    77   1e-12
ref|XP_002875118.1| hypothetical protein ARALYDRAFT_484143 [Arab...    77   1e-12

>gb|AAF43955.1|AC012188_32 Contains similarity to an unknown protein from Arabidopsis thaliana
           gb|AC005936.2. EST gb|AI997527 comes from this gene
           [Arabidopsis thaliana]
          Length = 343

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/61 (60%), Positives = 42/61 (68%)
 Frame = +2

Query: 5   KVFLAGISXXXXXXXXXXXXXXXXXXQRFPVESRGRRKKLQEVGYLTTICFTCFLIRCIM 184
           K+F AG+S                  QRFPVES+GRRKKLQEVGY+TTICFTCFLIRCIM
Sbjct: 228 KMFFAGVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIM 287

Query: 185 V 187
           +
Sbjct: 288 M 288


>gb|AAF63179.1|AC010657_15 T5E21.3 [Arabidopsis thaliana]
          Length = 328

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/61 (60%), Positives = 42/61 (68%)
 Frame = +2

Query: 5   KVFLAGISXXXXXXXXXXXXXXXXXXQRFPVESRGRRKKLQEVGYLTTICFTCFLIRCIM 184
           K+F AG+S                  QRFPVES+GRRKKLQEVGY+TTICFTCFLIRCIM
Sbjct: 213 KMFFAGVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIM 272

Query: 185 V 187
           +
Sbjct: 273 M 273


>gb|AAO22624.1| unknown protein [Arabidopsis thaliana]
          Length = 293

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/61 (60%), Positives = 42/61 (68%)
 Frame = +2

Query: 5   KVFLAGISXXXXXXXXXXXXXXXXXXQRFPVESRGRRKKLQEVGYLTTICFTCFLIRCIM 184
           K+F AG+S                  QRFPVES+GRRKKLQEVGY+TTICFTCFLIRCIM
Sbjct: 178 KMFFAGVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIM 237

Query: 185 V 187
           +
Sbjct: 238 M 238


>ref|NP_563953.1| uncharacterized protein [Arabidopsis thaliana]
           gi|30683857|ref|NP_849661.1| uncharacterized protein
           [Arabidopsis thaliana] gi|15706301|dbj|BAB68339.1| THH1
           [Arabidopsis thaliana] gi|56381923|gb|AAV85680.1|
           At1g14530 [Arabidopsis thaliana]
           gi|60543343|gb|AAX22269.1| At1g14530 [Arabidopsis
           thaliana] gi|332191055|gb|AEE29176.1| uncharacterized
           protein [Arabidopsis thaliana]
           gi|332191056|gb|AEE29177.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 293

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/61 (60%), Positives = 42/61 (68%)
 Frame = +2

Query: 5   KVFLAGISXXXXXXXXXXXXXXXXXXQRFPVESRGRRKKLQEVGYLTTICFTCFLIRCIM 184
           K+F AG+S                  QRFPVES+GRRKKLQEVGY+TTICFTCFLIRCIM
Sbjct: 178 KMFFAGVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIM 237

Query: 185 V 187
           +
Sbjct: 238 M 238


>ref|XP_002875118.1| hypothetical protein ARALYDRAFT_484143 [Arabidopsis lyrata subsp.
           lyrata] gi|297320956|gb|EFH51377.1| hypothetical protein
           ARALYDRAFT_484143 [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/61 (60%), Positives = 42/61 (68%)
 Frame = +2

Query: 5   KVFLAGISXXXXXXXXXXXXXXXXXXQRFPVESRGRRKKLQEVGYLTTICFTCFLIRCIM 184
           K+F AG+S                  QRFPVES+GRRKKLQEVGY+TTICFTCFLIRCIM
Sbjct: 193 KMFFAGVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIM 252

Query: 185 V 187
           +
Sbjct: 253 M 253


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