BLASTX nr result

ID: Cnidium21_contig00008397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008397
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591245.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   140   1e-31
ref|XP_003599924.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   140   2e-31
ref|XP_003598094.1| Helicase-like protein [Medicago truncatula] ...   138   8e-31
ref|XP_003605523.1| Helicase-like protein [Medicago truncatula] ...   137   1e-30
ref|XP_003604758.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   136   3e-30

>ref|XP_003591245.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355480293|gb|AES61496.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1517

 Score =  140 bits (354), Expect = 1e-31
 Identities = 86/199 (43%), Positives = 113/199 (56%), Gaps = 28/199 (14%)
 Frame = +3

Query: 3    IVDMLPGEEFSYLSVDRADDFG-GSDAELDVAFPTEYLNSLT--------------IPXX 137
            ++D++PGEE  YLS D       G DA  D+  P E+LN++               +P  
Sbjct: 1320 VLDLIPGEEKIYLSYDTPYHKNLGGDAVDDIHTP-EFLNTIVASGLPNHRIRLKVGVPVM 1378

Query: 138  XXXXXXXXXXXXXX-------------QCEVICGSFVGTRHFIPRMECCPSDSKLPFKLI 278
                                       + EVI GS +G + FIPR+   PSD+++PFK  
Sbjct: 1379 LLRTIDQNLGLCNGTRLIITKMGKFVLEAEVISGSNIGEKVFIPRLSLQPSDTRIPFKFK 1438

Query: 279  RKQMPLQICYAMTINKSQGQSLEMVGLFLPKSVFTHGQLYVTISRVTSPKGLKIFIDDES 458
            R+Q PL + +AMTINKSQGQSL+ VG++LP SVF+HGQLYV ISRVTS  GLK+ I+DE 
Sbjct: 1439 RRQFPLSVSFAMTINKSQGQSLKNVGVYLPSSVFSHGQLYVAISRVTSRDGLKMLINDED 1498

Query: 459  GQCTTYTQNVVFK*VFYNL 515
            GQ T  T NVV+K VF N+
Sbjct: 1499 GQDTDVTSNVVYKEVFRNV 1517


>ref|XP_003599924.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355488972|gb|AES70175.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 564

 Score =  140 bits (352), Expect = 2e-31
 Identities = 84/199 (42%), Positives = 114/199 (57%), Gaps = 28/199 (14%)
 Frame = +3

Query: 3   IVDMLPGEEFSYLSVDRADDFG-GSDAELDVAFPTEYLNSLT--------------IPXX 137
           ++D++PGEE  YLS D +     G DA  D+  P E+LN++               +P  
Sbjct: 367 VLDLIPGEEKIYLSYDTSYHKNLGGDAVDDIHTP-EFLNTIVASGLPNHRIRLKVGVPVM 425

Query: 138 XXXXXXXXXXXXXX-------------QCEVICGSFVGTRHFIPRMECCPSDSKLPFKLI 278
                                      + EVI GS +G + FIPR+   PSD+++PFK  
Sbjct: 426 LLRTIDQNLGLCNGTRLIITKMGKFVLEAEVISGSNIGEKVFIPRLSLQPSDTRIPFKFK 485

Query: 279 RKQMPLQICYAMTINKSQGQSLEMVGLFLPKSVFTHGQLYVTISRVTSPKGLKIFIDDES 458
           R+Q PL + +AMTINKSQGQSL+ VG++LP  VF+HGQLYV ISRVTS  GLK+ I+DE 
Sbjct: 486 RRQFPLSVSFAMTINKSQGQSLKNVGVYLPSPVFSHGQLYVAISRVTSRDGLKMLINDED 545

Query: 459 GQCTTYTQNVVFK*VFYNL 515
           GQ T  T NVV++ VF+N+
Sbjct: 546 GQDTDVTSNVVYREVFHNV 564


>ref|XP_003598094.1| Helicase-like protein [Medicago truncatula]
            gi|355487142|gb|AES68345.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1672

 Score =  138 bits (347), Expect = 8e-31
 Identities = 67/110 (60%), Positives = 85/110 (77%)
 Frame = +3

Query: 186  EVICGSFVGTRHFIPRMECCPSDSKLPFKLIRKQMPLQICYAMTINKSQGQSLEMVGLFL 365
            +VI GS +G + FIPR+   PSD+++PFK  R+Q P+ IC+AMTINKSQGQSL+ VG++L
Sbjct: 1563 KVITGSNIGEKVFIPRLSLEPSDTRIPFKFQRRQFPISICFAMTINKSQGQSLKQVGIYL 1622

Query: 366  PKSVFTHGQLYVTISRVTSPKGLKIFIDDESGQCTTYTQNVVFK*VFYNL 515
            P+ VF HGQLYV ISRVTS KGLKI + DE+G C   T NVVFK +F N+
Sbjct: 1623 PQPVFYHGQLYVAISRVTSRKGLKILLLDENGCCIDSTNNVVFKEIFRNV 1672


>ref|XP_003605523.1| Helicase-like protein [Medicago truncatula]
            gi|355506578|gb|AES87720.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1585

 Score =  137 bits (346), Expect = 1e-30
 Identities = 79/198 (39%), Positives = 107/198 (54%), Gaps = 27/198 (13%)
 Frame = +3

Query: 3    IVDMLPGEEFSYLSVDRADDFGGSDAELDVAFPTEYLNSLT---IPXXXXXXXXXXXXXX 173
            ++ ++PGEE +YLS D       S    D     E+LN++T   IP              
Sbjct: 1388 VMSLIPGEEKTYLSCDSPLSTNSSATRPDDIHTPEFLNTITASGIPNHKIKLKVGVPIML 1447

Query: 174  XX------------------------QCEVICGSFVGTRHFIPRMECCPSDSKLPFKLIR 281
                                      + +VI GS +G   +IPR+   PSD+++PFK  R
Sbjct: 1448 LRNLDPTAGLCNGTRLIVTKMGRYVLEAKVITGSNIGDIVYIPRLSLTPSDTRIPFKFQR 1507

Query: 282  KQMPLQICYAMTINKSQGQSLEMVGLFLPKSVFTHGQLYVTISRVTSPKGLKIFIDDESG 461
            KQ P+ + +AMTINKSQGQSL+ VG++LP+ VF+HGQLYV +SRVTS KGLK+ + DE  
Sbjct: 1508 KQFPISVSFAMTINKSQGQSLQKVGIYLPQPVFSHGQLYVAVSRVTSRKGLKLLLTDEDS 1567

Query: 462  QCTTYTQNVVFK*VFYNL 515
             C + T NVVF  VF NL
Sbjct: 1568 NCISTTSNVVFHEVFRNL 1585


>ref|XP_003604758.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355505813|gb|AES86955.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 175

 Score =  136 bits (342), Expect = 3e-30
 Identities = 65/110 (59%), Positives = 84/110 (76%)
 Frame = +3

Query: 186 EVICGSFVGTRHFIPRMECCPSDSKLPFKLIRKQMPLQICYAMTINKSQGQSLEMVGLFL 365
           +VI GS +G + FIPR+   PSD+++PFK  R+Q P+ +C+AMTINKSQGQSL+ VG++L
Sbjct: 66  KVITGSNIGEKVFIPRLSLEPSDTRIPFKFQRRQFPISVCFAMTINKSQGQSLKQVGIYL 125

Query: 366 PKSVFTHGQLYVTISRVTSPKGLKIFIDDESGQCTTYTQNVVFK*VFYNL 515
           P+ VF+HGQLYV ISRVTS KGLKI + DE G C   T NVVF  +F N+
Sbjct: 126 PQPVFSHGQLYVAISRVTSRKGLKILLLDEHGCCIDSTNNVVFNEIFRNV 175


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