BLASTX nr result

ID: Cnidium21_contig00008393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008393
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEW69791.1| Hop-interacting protein THI028 [Solanum lycopersi...   120   2e-25
gb|EAY98914.1| hypothetical protein OsI_20869 [Oryza sativa Indi...   100   2e-19
ref|NP_001056232.1| Os05g0549000 [Oryza sativa Japonica Group] g...    98   8e-19
gb|AEL98678.1| clathrin assembly protein, partial [Silene latifo...    96   4e-18
gb|AEL98677.1| clathrin assembly protein, partial [Silene latifo...    96   5e-18

>gb|AEW69791.1| Hop-interacting protein THI028 [Solanum lycopersicum]
          Length = 563

 Score =  120 bits (300), Expect = 2e-25
 Identities = 63/110 (57%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
 Frame = +3

Query: 3   YIREAPRMVSAPRETLEFPERLQLTYKPEGDASPSEE-NNISNDEPTPISLDIVPVSNVE 179
           YI+EAPR+VS P ETL++PERL LTYK E + S SE+  + +N+ P P+ LD   VS  E
Sbjct: 306 YIKEAPRIVSVPIETLDYPERLMLTYKQEDEPSASEDAQDSANETPPPLPLDDAVVSTTE 365

Query: 180 DPVYPPAPPSNDFVSDDLLGLNAPTPIASAIEESNALALAIIPSDSSPRD 329
            P  P  PP +   SDDLLGLNAP+  ASAIE+SNALALAI+PS ++P D
Sbjct: 366 APSPPMPPPPSSLESDDLLGLNAPSGYASAIEDSNALALAIVPSGTTPFD 415


>gb|EAY98914.1| hypothetical protein OsI_20869 [Oryza sativa Indica Group]
          Length = 567

 Score =  100 bits (249), Expect = 2e-19
 Identities = 59/113 (52%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
 Frame = +3

Query: 3   YIREAPRMVSAPRETLEFPERLQLTYKPEGDASPSEENNISNDEPTPISLDIVPVSNVED 182
           Y+REAPRMV   RETLE PERL LTYKPE     S  + +  ++P P+  + VPV  V +
Sbjct: 306 YVREAPRMVPV-RETLELPERLLLTYKPEEQEEDSVPDPVEEEKP-PVE-EPVPVPPVTE 362

Query: 183 PVYPPAPPSNDFV-SDDLLGLNAPTPIASAIEESNALALAIIPSDSSPRDKET 338
            V PP PP      + DLLGLN P P  SAIEESNALALAI+P+D+      T
Sbjct: 363 AVSPPPPPKTKVADTGDLLGLNDPNPSVSAIEESNALALAIVPADAGASTSST 415


>ref|NP_001056232.1| Os05g0549000 [Oryza sativa Japonica Group]
           gi|113579783|dbj|BAF18146.1| Os05g0549000 [Oryza sativa
           Japonica Group] gi|222632458|gb|EEE64590.1| hypothetical
           protein OsJ_19442 [Oryza sativa Japonica Group]
          Length = 567

 Score = 98.2 bits (243), Expect = 8e-19
 Identities = 58/113 (51%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
 Frame = +3

Query: 3   YIREAPRMVSAPRETLEFPERLQLTYKPEGDASPSEENNISNDEPTPISLDIVPVSNVED 182
           Y+REAPRMV   RE LE PERL LTYKPE     S  + +  ++P P+  + VPV  V +
Sbjct: 306 YVREAPRMVPV-REPLELPERLLLTYKPEEQEEDSVPDPVEEEKP-PVE-EPVPVPPVTE 362

Query: 183 PVYPPAPPSNDFV-SDDLLGLNAPTPIASAIEESNALALAIIPSDSSPRDKET 338
            V PP PP      + DLLGLN P P  SAIEESNALALAI+P+D+      T
Sbjct: 363 AVSPPPPPKTKVADTGDLLGLNDPNPSVSAIEESNALALAIVPADAGASTSST 415


>gb|AEL98678.1| clathrin assembly protein, partial [Silene latifolia]
          Length = 556

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 61/112 (54%), Positives = 74/112 (66%)
 Frame = +3

Query: 3   YIREAPRMVSAPRETLEFPERLQLTYKPEGDASPSEENNISNDEPTPISLDIVPVSNVED 182
           YIREA  +V  P + LEFPERLQLTYKPE D S  E+ N+S DEP P++ D   +S+  +
Sbjct: 305 YIREARSVVLVPSQQLEFPERLQLTYKPEEDYS-EEDGNVSIDEPQPMTSD--DLSSTAE 361

Query: 183 PVYPPAPPSNDFVSDDLLGLNAPTPIASAIEESNALALAIIPSDSSPRDKET 338
              P + P+    S DLLGLN  T  ASAIEESNALALAI+ SDSS  +  T
Sbjct: 362 TA-PASQPAEIIDSGDLLGLNM-TNDASAIEESNALALAIVQSDSSTSNSGT 411


>gb|AEL98677.1| clathrin assembly protein, partial [Silene latifolia]
          Length = 556

 Score = 95.5 bits (236), Expect = 5e-18
 Identities = 60/112 (53%), Positives = 73/112 (65%)
 Frame = +3

Query: 3   YIREAPRMVSAPRETLEFPERLQLTYKPEGDASPSEENNISNDEPTPISLDIVPVSNVED 182
           YIREAP +V  P + LEFPERLQLTYKPE D S  E+ N+  DEP P++ D   +S+  +
Sbjct: 305 YIREAPSVVLVPSQQLEFPERLQLTYKPEEDYS-EEDGNVFIDEPQPMTSD--DLSSTAE 361

Query: 183 PVYPPAPPSNDFVSDDLLGLNAPTPIASAIEESNALALAIIPSDSSPRDKET 338
              P + P+    S DLLGLN  T  AS IEESNALALAI+ SDSS  +  T
Sbjct: 362 TA-PASQPAEIIDSGDLLGLNM-TNDASVIEESNALALAIVQSDSSTSNSGT 411


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