BLASTX nr result

ID: Cnidium21_contig00008364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008364
         (1647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280247.1| PREDICTED: eukaryotic translation initiation...   640   0.0  
ref|XP_002533539.1| cop9 complex subunit 7a, putative [Ricinus c...   617   e-174
ref|XP_004156166.1| PREDICTED: eukaryotic translation initiation...   616   e-174
ref|XP_004141468.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t...   609   e-172
gb|ABB29949.1| unknown [Solanum tuberosum]                            609   e-172

>ref|XP_002280247.1| PREDICTED: eukaryotic translation initiation factor 3 subunit M
            [Vitis vinifera] gi|296082198|emb|CBI21203.3| unnamed
            protein product [Vitis vinifera]
          Length = 410

 Score =  640 bits (1650), Expect = 0.0
 Identities = 312/410 (76%), Positives = 360/410 (87%)
 Frame = -2

Query: 1532 MTTLVPTSEEDPALSVVRFTSEISWADAGPEVAEPQVSRLCLEAQECMIAARWLDLASLM 1353
            MTTLVPTSEEDPALSVVR+T+EISWADAGPEVAEPQV+RLC+EAQECM+  RWLDLASLM
Sbjct: 1    MTTLVPTSEEDPALSVVRYTAEISWADAGPEVAEPQVTRLCMEAQECMVRGRWLDLASLM 60

Query: 1352 LTSADLIFSKASEKDLECIFTVICNLVKKTDSLDEALEMAKLIATKVTQQPNDKPALRLK 1173
            LTSADL+FSKAS+KDLECIFTVICNLV K++S DEALEMAK I+ K+TQQPNDK ALRLK
Sbjct: 61   LTSADLMFSKASDKDLECIFTVICNLVTKSESPDEALEMAKFISAKITQQPNDKAALRLK 120

Query: 1172 IMFNLYNLLENPFSRFFVYMKALNLAVNGKVIEHVVPSFKKIDSFLKEWNLGVQDQRELF 993
            I+FNLYNLLENP+SRF+VYMKALNLAVNGKV EH++PSFK +DSFLKEWN+G+ DQR L+
Sbjct: 121  ILFNLYNLLENPYSRFYVYMKALNLAVNGKVTEHIIPSFKMMDSFLKEWNIGILDQRALY 180

Query: 992  LTVSNILKESKSSAKDSFKFLTKYLATFSDEDXXXXXXXXXXXXXXVIEFVKTPDMFQCD 813
            L +SNILKE+KS  KD FKFLTKYLATFS ED              ++EFV+ PDMFQCD
Sbjct: 181  LNISNILKENKSLGKDYFKFLTKYLATFSGEDAYTMSEAKEEAVRTIMEFVRAPDMFQCD 240

Query: 812  LLDMPAVSQLEKDAKHELVYQLLKIFLTQKLDVYLEFHSANSSLMKNYGLLHEDCVAKMR 633
            LLDMPAV QLEKDAK+ LVYQLLKIFLTQ+LD YL+FH+ANS+L+K+YGL+HEDC+ KMR
Sbjct: 241  LLDMPAVGQLEKDAKYALVYQLLKIFLTQRLDAYLDFHAANSTLLKSYGLVHEDCITKMR 300

Query: 632  LMSLVDLGSSESGHIPYDVIKCTLQIADDEVEGWVVKAITAKLLDCKIDQMNQIIIVSRC 453
            LMSLVDLGS ES  IPY +IK TL+I DDEVE WVVKAIT KL+DCK+DQMNQ+++VSRC
Sbjct: 301  LMSLVDLGSDESCQIPYSLIKDTLRIDDDEVELWVVKAITVKLMDCKMDQMNQVVLVSRC 360

Query: 452  TERVFGLNQWQSLRTKLATWRGNIANVISTIQASKAGDDGAQLMQGLAIR 303
            +ERVFG  QWQ+LR+KL TWRGNIANVI+TIQA+K  +DG+Q MQGL IR
Sbjct: 361  SERVFGQQQWQNLRSKLLTWRGNIANVINTIQANKISEDGSQAMQGLTIR 410


>ref|XP_002533539.1| cop9 complex subunit 7a, putative [Ricinus communis]
            gi|223526589|gb|EEF28842.1| cop9 complex subunit 7a,
            putative [Ricinus communis]
          Length = 412

 Score =  617 bits (1591), Expect = e-174
 Identities = 307/412 (74%), Positives = 357/412 (86%), Gaps = 2/412 (0%)
 Frame = -2

Query: 1532 MTTLVPTSEEDPALSVVRFTSEISWADAGPEVAEPQVSRLCLEAQECMIAARWLDLASLM 1353
            MTT+VPTSEEDPAL+VVRFTSE++WADAGPEVAE QVSRLC+EAQECM+  RWLDLASL+
Sbjct: 1    MTTVVPTSEEDPALAVVRFTSELAWADAGPEVAEQQVSRLCVEAQECMVIGRWLDLASLI 60

Query: 1352 LTSADLIFS--KASEKDLECIFTVICNLVKKTDSLDEALEMAKLIATKVTQQPNDKPALR 1179
            LTSAD+IFS  K SEKDLECIFTVICNLV K DS DEALEMAKLI  K+ QQP DKPALR
Sbjct: 61   LTSADVIFSNSKVSEKDLECIFTVICNLVTKPDSPDEALEMAKLICGKIIQQPADKPALR 120

Query: 1178 LKIMFNLYNLLENPFSRFFVYMKALNLAVNGKVIEHVVPSFKKIDSFLKEWNLGVQDQRE 999
            LKI+FNLYNLLE+P+SRF+VY+KAL+LA+NGKV EH+VPSFK I+SFLKEWNL V+DQRE
Sbjct: 121  LKILFNLYNLLESPYSRFYVYLKALDLALNGKVTEHMVPSFKTIESFLKEWNLEVKDQRE 180

Query: 998  LFLTVSNILKESKSSAKDSFKFLTKYLATFSDEDXXXXXXXXXXXXXXVIEFVKTPDMFQ 819
            LFL++SN+L+ESKSS KDSFKFLTKYLATF+ ED              +IEFVK+PDMFQ
Sbjct: 181  LFLSISNVLRESKSSGKDSFKFLTKYLATFAGEDAYAMGEAKEEAVRTIIEFVKSPDMFQ 240

Query: 818  CDLLDMPAVSQLEKDAKHELVYQLLKIFLTQKLDVYLEFHSANSSLMKNYGLLHEDCVAK 639
            CDLLDMPAV QLEKD K+ LVYQLLKIFLTQ+LD YLEF +ANS+L+K+Y L+HEDC+AK
Sbjct: 241  CDLLDMPAVGQLEKDGKYALVYQLLKIFLTQRLDAYLEFQTANSALLKSYDLVHEDCIAK 300

Query: 638  MRLMSLVDLGSSESGHIPYDVIKCTLQIADDEVEGWVVKAITAKLLDCKIDQMNQIIIVS 459
            MRLMSL+DL   ESG IPY +IK TL+I DDEVE WVVKAITAKL++CK+DQMN+++IVS
Sbjct: 301  MRLMSLLDLSLDESGRIPYTLIKDTLRINDDEVELWVVKAITAKLINCKMDQMNEVVIVS 360

Query: 458  RCTERVFGLNQWQSLRTKLATWRGNIANVISTIQASKAGDDGAQLMQGLAIR 303
             CTERVFG +QWQ LR+KLATWR N+ NVI+TIQA+K  +DG+Q MQGL IR
Sbjct: 361  SCTERVFGQHQWQKLRSKLATWRDNVTNVINTIQANKVTEDGSQAMQGLMIR 412


>ref|XP_004156166.1| PREDICTED: eukaryotic translation initiation factor 3 subunit M-like
            [Cucumis sativus]
          Length = 410

 Score =  616 bits (1588), Expect = e-174
 Identities = 299/410 (72%), Positives = 353/410 (86%)
 Frame = -2

Query: 1532 MTTLVPTSEEDPALSVVRFTSEISWADAGPEVAEPQVSRLCLEAQECMIAARWLDLASLM 1353
            M T+V TSEED AL+VVRF SE++WADAGPE AEPQV+RLC+EAQECM+  RWLDLASLM
Sbjct: 1    MATVVQTSEEDAALTVVRFASELAWADAGPETAEPQVNRLCVEAQECMVIGRWLDLASLM 60

Query: 1352 LTSADLIFSKASEKDLECIFTVICNLVKKTDSLDEALEMAKLIATKVTQQPNDKPALRLK 1173
            LTSADLIFSK SEKDLEC+FT+ICNLV K  S DE+LEMAKLI+ K+ QQPNDKPALRLK
Sbjct: 61   LTSADLIFSKVSEKDLECVFTIICNLVTKAGSPDESLEMAKLISAKICQQPNDKPALRLK 120

Query: 1172 IMFNLYNLLENPFSRFFVYMKALNLAVNGKVIEHVVPSFKKIDSFLKEWNLGVQDQRELF 993
            I+FNLYNLLENP+SRF VYMKAL+LA  GK  EH++P+ KKI+SFL+EWN+G+ +QRELF
Sbjct: 121  ILFNLYNLLENPYSRFHVYMKALDLAFKGKAPEHIIPTLKKIESFLREWNIGIVEQRELF 180

Query: 992  LTVSNILKESKSSAKDSFKFLTKYLATFSDEDXXXXXXXXXXXXXXVIEFVKTPDMFQCD 813
            L +SN+LKESKSSA D FKFLTKYLATFS ED              ++EFVK P+MF+CD
Sbjct: 181  LAISNVLKESKSSANDYFKFLTKYLATFSGEDASTLSEAKEEAVHAIVEFVKAPNMFKCD 240

Query: 812  LLDMPAVSQLEKDAKHELVYQLLKIFLTQKLDVYLEFHSANSSLMKNYGLLHEDCVAKMR 633
            LLDMPAV QLEKDAK+ LVYQLLKIFLTQ+LD Y+EF + NSSL+K+YGL+HEDC+AKMR
Sbjct: 241  LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQATNSSLLKSYGLVHEDCIAKMR 300

Query: 632  LMSLVDLGSSESGHIPYDVIKCTLQIADDEVEGWVVKAITAKLLDCKIDQMNQIIIVSRC 453
            L+SLVDLGS+ES  IPY +IK TLQI DDEVE WVVKAIT+KL+DCK+DQMN+++IVSRC
Sbjct: 301  LLSLVDLGSNESARIPYALIKDTLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRC 360

Query: 452  TERVFGLNQWQSLRTKLATWRGNIANVISTIQASKAGDDGAQLMQGLAIR 303
            T+RVFG +QW++LRTKL TWRGNIANVI TI+A+K  +DG+Q MQGLAIR
Sbjct: 361  TDRVFGQHQWETLRTKLTTWRGNIANVIGTIRANKIVEDGSQAMQGLAIR 410


>ref|XP_004141468.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
            factor 3 subunit M-like [Cucumis sativus]
          Length = 417

 Score =  609 bits (1570), Expect = e-172
 Identities = 299/417 (71%), Positives = 353/417 (84%), Gaps = 7/417 (1%)
 Frame = -2

Query: 1532 MTTLVPTSEEDPALSVVRFTSEISWADAGPEVAEPQVSRLCLEAQECMIAARWLDLASLM 1353
            M T+V TSEED AL+VVRF SE++WADAGPE AEPQV+RLC+EAQECM+  RWLDLASLM
Sbjct: 1    MATVVQTSEEDAALTVVRFASELAWADAGPETAEPQVNRLCVEAQECMVIGRWLDLASLM 60

Query: 1352 LTSADLIFSKASEKDLECIFTVICNLVKKTDSLDEALEMAKLIATKVTQQPNDKPALRLK 1173
            LTSADLIFSK SEKDLEC+FT+ICNLV K  S DE+LEMAKLI+ K+ QQPNDKPALRLK
Sbjct: 61   LTSADLIFSKVSEKDLECVFTIICNLVTKAGSPDESLEMAKLISAKICQQPNDKPALRLK 120

Query: 1172 IMFNLYNLLENPFSRFFVYMKALNLAVNGKVIEHVVPSFKKIDSFLKEWNLGVQDQRELF 993
            I+FNLYNLLENP+SRF VYMKAL+LA  GK  EH++P+ KKI+SFL+EWN+G+ +QRELF
Sbjct: 121  ILFNLYNLLENPYSRFHVYMKALDLAFKGKAPEHIIPTLKKIESFLREWNIGIVEQRELF 180

Query: 992  LTVSNILKESKSSAKDSFKFLTKYLATFSDEDXXXXXXXXXXXXXXVIEFVKTPDMFQCD 813
            L +SN+LKESKSSA D FKFLTKYLATFS ED              ++EFVK P+MF+CD
Sbjct: 181  LAISNVLKESKSSANDYFKFLTKYLATFSGEDASTLSEAKEEAVHAIVEFVKAPNMFKCD 240

Query: 812  LLDMPAVSQLEKDAKHELVYQLLKIFLTQKLDVYLEFHSANSSLMKNYGLLHEDCVAKMR 633
            LLDMPAV QLEKDAK+ LVYQLLKIFLTQ+LD Y+EF + NSSL+K+YGL+HEDC+AKMR
Sbjct: 241  LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQATNSSLLKSYGLVHEDCIAKMR 300

Query: 632  LMSLVDLGSSESGHIPYDVIKCTL-------QIADDEVEGWVVKAITAKLLDCKIDQMNQ 474
            L+SLVDLGS+ES  IPY +IK TL       QI DDEVE WVVKAIT+KL+DCK+DQMN+
Sbjct: 301  LLSLVDLGSNESARIPYALIKDTLRXKKKLSQINDDEVELWVVKAITSKLIDCKMDQMNE 360

Query: 473  IIIVSRCTERVFGLNQWQSLRTKLATWRGNIANVISTIQASKAGDDGAQLMQGLAIR 303
            ++IVSRCT+RVFG +QW++LRTKL TWRGNIANVI TI+A+K  +DG+Q MQGLAIR
Sbjct: 361  VVIVSRCTDRVFGQHQWETLRTKLTTWRGNIANVIGTIRANKIVEDGSQAMQGLAIR 417


>gb|ABB29949.1| unknown [Solanum tuberosum]
          Length = 410

 Score =  609 bits (1570), Expect = e-172
 Identities = 296/410 (72%), Positives = 350/410 (85%)
 Frame = -2

Query: 1532 MTTLVPTSEEDPALSVVRFTSEISWADAGPEVAEPQVSRLCLEAQECMIAARWLDLASLM 1353
            MTT+VPTSEEDP LSVVRFT+E+SWADAG E AEP+V+RLC+EAQ+CMI  RWLDL SLM
Sbjct: 1    MTTVVPTSEEDPVLSVVRFTAEMSWADAGAETAEPEVNRLCVEAQKCMIEGRWLDLVSLM 60

Query: 1352 LTSADLIFSKASEKDLECIFTVICNLVKKTDSLDEALEMAKLIATKVTQQPNDKPALRLK 1173
            L SAD+IFSKASEKDLEC+FT++CNLVKK +SLD+  EMA+LI+ K+ QQPNDKPALRLK
Sbjct: 61   LASADIIFSKASEKDLECVFTIMCNLVKKPESLDQVHEMAELISAKIIQQPNDKPALRLK 120

Query: 1172 IMFNLYNLLENPFSRFFVYMKALNLAVNGKVIEHVVPSFKKIDSFLKEWNLGVQDQRELF 993
            I+FNLYNLLENP+SRF VY+K+LNLA  GKV EH++PS KK+D+FLKEWNLGV+DQRELF
Sbjct: 121  ILFNLYNLLENPYSRFCVYLKSLNLATAGKVTEHILPSIKKMDNFLKEWNLGVKDQRELF 180

Query: 992  LTVSNILKESKSSAKDSFKFLTKYLATFSDEDXXXXXXXXXXXXXXVIEFVKTPDMFQCD 813
            L +SNILKE+K S KDSF FLTKYL TFS ED              +++FV++PDMF+CD
Sbjct: 181  LAISNILKENKGSTKDSFMFLTKYLETFSSEDASNMNEAKEEASRAIVDFVRSPDMFKCD 240

Query: 812  LLDMPAVSQLEKDAKHELVYQLLKIFLTQKLDVYLEFHSANSSLMKNYGLLHEDCVAKMR 633
            LLDMPA++QLEKDA++  VYQLLKIFLTQ+LD YL+F +ANS+L+K YGL+H+D ++KMR
Sbjct: 241  LLDMPAIAQLEKDAQYGPVYQLLKIFLTQRLDAYLDFEAANSALLKTYGLVHDDSISKMR 300

Query: 632  LMSLVDLGSSESGHIPYDVIKCTLQIADDEVEGWVVKAITAKLLDCKIDQMNQIIIVSRC 453
            LMSLVDLG +ES  IPY VIK  LQI D EVE WVVKAITAKLLDCKIDQMNQ++IVSRC
Sbjct: 301  LMSLVDLGLNESSQIPYSVIKQALQIDDIEVESWVVKAITAKLLDCKIDQMNQVVIVSRC 360

Query: 452  TERVFGLNQWQSLRTKLATWRGNIANVISTIQASKAGDDGAQLMQGLAIR 303
            TERVFG++QWQ LRTKL TWRGNIA VIST+QA+K  +D  Q MQGLAIR
Sbjct: 361  TERVFGVHQWQELRTKLVTWRGNIAGVISTVQANKITEDSTQAMQGLAIR 410


Top