BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008363
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   179   4e-43
emb|CBI33876.3| unnamed protein product [Vitis vinifera]              179   5e-43
ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   171   1e-40
ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   171   1e-40
ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ri...   171   1e-40

>ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis
           vinifera]
          Length = 288

 Score =  179 bits (454), Expect = 4e-43
 Identities = 100/171 (58%), Positives = 119/171 (69%), Gaps = 8/171 (4%)
 Frame = -2

Query: 491 SKKFQLSTFTPARSLKIPV----LSSVKHSRKSRFEMFTAVQXXXXXXXXXEDVQLYQKR 324
           S     S F P+  LK P+    L     + K  FE+ ++VQ         +  +  QKR
Sbjct: 30  SMSLHSSAFIPSICLKYPLYPLPLLYTNPTTKFSFELCSSVQEIEVEAKPEQTQEPNQKR 89

Query: 323 KLFVYNLPWSFNVVNIKNLFGECGTVIDIEIIK-KNGKSRGFAFVTMSSAEEAQAVVEKF 147
           KLFV NLPWS +VV+IKNLFGECGTV D+EIIK K+G+SRG+AFVTM S EEAQAVVEKF
Sbjct: 90  KLFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAVVEKF 149

Query: 146 DSQELSGRVITVEFAKRLKKPSPPLPD---SAPSGKTRYKLYVSNLAWEVR 3
           DS ELSGR+I VEFAKR KKPSPP P      P+G+TR+KLYVSNLAW+VR
Sbjct: 150 DSYELSGRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKLYVSNLAWKVR 200


>emb|CBI33876.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  179 bits (453), Expect = 5e-43
 Identities = 99/165 (60%), Positives = 118/165 (71%), Gaps = 8/165 (4%)
 Frame = -2

Query: 473 STFTPARSLKIPV----LSSVKHSRKSRFEMFTAVQXXXXXXXXXEDVQLYQKRKLFVYN 306
           S F P+  LK P+    L     + K  FE+ ++VQ         +  +  QKRKLFV N
Sbjct: 6   SAFIPSICLKYPLYPLPLLYTNPTTKFSFELCSSVQEIEVEAKPEQTQEPNQKRKLFVLN 65

Query: 305 LPWSFNVVNIKNLFGECGTVIDIEIIK-KNGKSRGFAFVTMSSAEEAQAVVEKFDSQELS 129
           LPWS +VV+IKNLFGECGTV D+EIIK K+G+SRG+AFVTM S EEAQAVVEKFDS ELS
Sbjct: 66  LPWSLSVVDIKNLFGECGTVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAVVEKFDSYELS 125

Query: 128 GRVITVEFAKRLKKPSPPLPD---SAPSGKTRYKLYVSNLAWEVR 3
           GR+I VEFAKR KKPSPP P      P+G+TR+KLYVSNLAW+VR
Sbjct: 126 GRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKLYVSNLAWKVR 170


>ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 288

 Score =  171 bits (433), Expect = 1e-40
 Identities = 94/173 (54%), Positives = 122/173 (70%), Gaps = 6/173 (3%)
 Frame = -2

Query: 503 KASSSKKFQLSTFTPARSLK--IPVLSSVKHSRKSR---FEMFTAVQXXXXXXXXXEDVQ 339
           K  S  K ++S  +P  SL    P+  +  +S ++R     + +A+Q         E+  
Sbjct: 30  KLPSPIKLRISFSSPLLSLNPTTPISPTSFNSSRNRGGGARLCSALQEVTLEEASEENQD 89

Query: 338 LYQKRKLFVYNLPWSFNVVNIKNLFGECGTVIDIEIIK-KNGKSRGFAFVTMSSAEEAQA 162
           + QKRKL+++NLPWS +VV+IK LFG+CGTV D+EIIK KNG+SRGFAFVTM+S +EAQA
Sbjct: 90  VNQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQKNGRSRGFAFVTMASPDEAQA 149

Query: 161 VVEKFDSQELSGRVITVEFAKRLKKPSPPLPDSAPSGKTRYKLYVSNLAWEVR 3
            ++KFDSQE+SGRVI VEFAKRLKKP PP P   P G+T  KLYVSNLAW+VR
Sbjct: 150 AIQKFDSQEISGRVIKVEFAKRLKKPPPPKPPGPPPGETVNKLYVSNLAWKVR 202


>ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis
           sativus]
          Length = 282

 Score =  171 bits (433), Expect = 1e-40
 Identities = 94/173 (54%), Positives = 122/173 (70%), Gaps = 6/173 (3%)
 Frame = -2

Query: 503 KASSSKKFQLSTFTPARSLK--IPVLSSVKHSRKSR---FEMFTAVQXXXXXXXXXEDVQ 339
           K  S  K ++S  +P  SL    P+  +  +S ++R     + +A+Q         E+  
Sbjct: 24  KLPSPIKLRISFSSPLLSLNPTTPISPTSFNSSRNRGGGARLCSALQEVTLEEASEENQD 83

Query: 338 LYQKRKLFVYNLPWSFNVVNIKNLFGECGTVIDIEIIK-KNGKSRGFAFVTMSSAEEAQA 162
           + QKRKL+++NLPWS +VV+IK LFG+CGTV D+EIIK KNG+SRGFAFVTM+S +EAQA
Sbjct: 84  VNQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQKNGRSRGFAFVTMASPDEAQA 143

Query: 161 VVEKFDSQELSGRVITVEFAKRLKKPSPPLPDSAPSGKTRYKLYVSNLAWEVR 3
            ++KFDSQE+SGRVI VEFAKRLKKP PP P   P G+T  KLYVSNLAW+VR
Sbjct: 144 AIQKFDSQEISGRVIKVEFAKRLKKPPPPKPPGPPPGETVNKLYVSNLAWKVR 196


>ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223532973|gb|EEF34739.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 278

 Score =  171 bits (433), Expect = 1e-40
 Identities = 99/183 (54%), Positives = 122/183 (66%), Gaps = 13/183 (7%)
 Frame = -2

Query: 512 LRQKASSSKKFQLSTFT-----PARSLKIPVLS-----SVKH--SRKSRFEMFTAVQXXX 369
           L   +SSSK     TF        RS  IP+LS     S  H  +RK  FE F+  Q   
Sbjct: 12  LPHPSSSSKSLLSPTFINLFKHKCRSNSIPLLSHNFSLSNIHLTARKLSFERFSTAQEIM 71

Query: 368 XXXXXXEDVQLYQKRKLFVYNLPWSFNVVNIKNLFGECGTVIDIEIIK-KNGKSRGFAFV 192
                    +  QKRKL+V+NLPWS +VV+IKNLFG+CGTV D+EIIK KNG+SRGFAFV
Sbjct: 72  IPEETQ---ETTQKRKLYVFNLPWSLSVVDIKNLFGQCGTVTDVEIIKQKNGRSRGFAFV 128

Query: 191 TMSSAEEAQAVVEKFDSQELSGRVITVEFAKRLKKPSPPLPDSAPSGKTRYKLYVSNLAW 12
           T++S EEAQA ++K DS E+SGR+I VEFAKRLK PSPP P    + +TR+K+YVSNLAW
Sbjct: 129 TLASGEEAQAAIDKLDSHEVSGRIIRVEFAKRLKPPSPPSPTGTSARETRHKIYVSNLAW 188

Query: 11  EVR 3
           +VR
Sbjct: 189 KVR 191