BLASTX nr result

ID: Cnidium21_contig00008359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008359
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630655.1| 40S ribosomal protein S15a-5 [Medicago trunc...   196   3e-48
ref|XP_003566193.1| PREDICTED: 40S ribosomal protein S15a-5-like...   195   8e-48
ref|XP_002281092.1| PREDICTED: 40S ribosomal protein S15a-5 [Vit...   194   1e-47
ref|NP_194672.1| 40S ribosomal protein S15a-5 [Arabidopsis thali...   193   3e-47
gb|AFK49412.1| unknown [Lotus japonicus]                              192   4e-47

>ref|XP_003630655.1| 40S ribosomal protein S15a-5 [Medicago truncatula]
           gi|217071420|gb|ACJ84070.1| unknown [Medicago
           truncatula] gi|355524677|gb|AET05131.1| 40S ribosomal
           protein S15a-5 [Medicago truncatula]
           gi|388507250|gb|AFK41691.1| unknown [Medicago
           truncatula]
          Length = 129

 Score =  196 bits (499), Expect = 3e-48
 Identities = 91/125 (72%), Positives = 110/125 (88%)
 Frame = +1

Query: 46  ILNEALRKIVNAEKRGFANTHLQPVSNVTSSFLNIMKHRGYIKDFQVHDPQRVKNITVDL 225
           ILN+ALR +VNAEKRG A   L+P+SNV SSFL+IMKHRGYIKDFQV+DP RV  ITV+L
Sbjct: 5   ILNDALRSMVNAEKRGKAMVELKPISNVISSFLHIMKHRGYIKDFQVYDPHRVGRITVEL 64

Query: 226 QGRVKDCRVLTYRQDIKARDIENYRLRTLPTRQWGYVVISTPNGLLDHEEAIRQNVGGQV 405
           QGR+ DC+ LTYRQD+KA+DIE YRL TLPT QWGYVVI+TP+G+LDHEEA ++NVGGQV
Sbjct: 65  QGRINDCKALTYRQDLKAKDIEAYRLNTLPTHQWGYVVITTPDGVLDHEEAAKRNVGGQV 124

Query: 406 IGFFY 420
           +G+F+
Sbjct: 125 LGYFH 129


>ref|XP_003566193.1| PREDICTED: 40S ribosomal protein S15a-5-like [Brachypodium
           distachyon]
          Length = 129

 Score =  195 bits (495), Expect = 8e-48
 Identities = 89/125 (71%), Positives = 110/125 (88%)
 Frame = +1

Query: 46  ILNEALRKIVNAEKRGFANTHLQPVSNVTSSFLNIMKHRGYIKDFQVHDPQRVKNITVDL 225
           ILN+ALR +VNAE+RG A   LQP+S V  SFLNIMKHRGYIK+F+V DP RV  ITV+L
Sbjct: 5   ILNDALRTMVNAERRGKATACLQPISGVMISFLNIMKHRGYIKNFEVFDPHRVGKITVEL 64

Query: 226 QGRVKDCRVLTYRQDIKARDIENYRLRTLPTRQWGYVVISTPNGLLDHEEAIRQNVGGQV 405
           QGR+KDC+ LTYRQD+++++IE YR+R LPTRQWGYVV++TPNG+LDHEEAIRQNVGGQV
Sbjct: 65  QGRIKDCKALTYRQDLRSKEIEQYRIRMLPTRQWGYVVVTTPNGVLDHEEAIRQNVGGQV 124

Query: 406 IGFFY 420
           +G+F+
Sbjct: 125 LGYFH 129


>ref|XP_002281092.1| PREDICTED: 40S ribosomal protein S15a-5 [Vitis vinifera]
           gi|147768437|emb|CAN69268.1| hypothetical protein
           VITISV_043644 [Vitis vinifera]
           gi|297743113|emb|CBI35980.3| unnamed protein product
           [Vitis vinifera]
          Length = 129

 Score =  194 bits (494), Expect = 1e-47
 Identities = 90/125 (72%), Positives = 105/125 (84%)
 Frame = +1

Query: 46  ILNEALRKIVNAEKRGFANTHLQPVSNVTSSFLNIMKHRGYIKDFQVHDPQRVKNITVDL 225
           ILN+ALR +VNAE+RG A  HLQP+S V +SFL IMK  GYIKDFQV+DP RV  ITV+L
Sbjct: 5   ILNDALRTMVNAERRGMAKAHLQPISTVMTSFLKIMKDHGYIKDFQVYDPHRVGKITVEL 64

Query: 226 QGRVKDCRVLTYRQDIKARDIENYRLRTLPTRQWGYVVISTPNGLLDHEEAIRQNVGGQV 405
           QGR+ DCR LTYRQD+KA+DIE Y    LPTRQWGYVVI+TPNG+LDHEEA +QNVGGQV
Sbjct: 65  QGRINDCRALTYRQDLKAKDIEKYTANKLPTRQWGYVVITTPNGVLDHEEAAQQNVGGQV 124

Query: 406 IGFFY 420
           +G+FY
Sbjct: 125 LGYFY 129


>ref|NP_194672.1| 40S ribosomal protein S15a-5 [Arabidopsis thaliana]
           gi|297803094|ref|XP_002869431.1| RPS15AE [Arabidopsis
           lyrata subsp. lyrata]
           gi|75311751|sp|Q9M0E0.1|R15A5_ARATH RecName: Full=40S
           ribosomal protein S15a-5 gi|7269842|emb|CAB79701.1|
           ribosomal protein S15a homolog [Arabidopsis thaliana]
           gi|21553914|gb|AAM62997.1| ribosomal protein S15a
           homolog [Arabidopsis thaliana]
           gi|110737866|dbj|BAF00871.1| ribosomal protein S15a
           homolog [Arabidopsis thaliana]
           gi|111074474|gb|ABH04610.1| At4g29430 [Arabidopsis
           thaliana] gi|297315267|gb|EFH45690.1| RPS15AE
           [Arabidopsis lyrata subsp. lyrata]
           gi|332660230|gb|AEE85630.1| 40S ribosomal protein S15a-5
           [Arabidopsis thaliana]
          Length = 129

 Score =  193 bits (490), Expect = 3e-47
 Identities = 90/125 (72%), Positives = 109/125 (87%)
 Frame = +1

Query: 46  ILNEALRKIVNAEKRGFANTHLQPVSNVTSSFLNIMKHRGYIKDFQVHDPQRVKNITVDL 225
           ILN+ALR IVNAE+RG A+  L+P+S V SSFL IMK +GYIK+FQV+DP RV  ITVDL
Sbjct: 5   ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64

Query: 226 QGRVKDCRVLTYRQDIKARDIENYRLRTLPTRQWGYVVISTPNGLLDHEEAIRQNVGGQV 405
           QGRV DC+ LTYRQD++A++IE Y  RTLPTRQWGYVVI+TP+G+LDHEEAI++NVGGQV
Sbjct: 65  QGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNVGGQV 124

Query: 406 IGFFY 420
           +GFFY
Sbjct: 125 LGFFY 129


>gb|AFK49412.1| unknown [Lotus japonicus]
          Length = 129

 Score =  192 bits (489), Expect = 4e-47
 Identities = 89/125 (71%), Positives = 110/125 (88%)
 Frame = +1

Query: 46  ILNEALRKIVNAEKRGFANTHLQPVSNVTSSFLNIMKHRGYIKDFQVHDPQRVKNITVDL 225
           ILN+ALR +VNAE+RG A   L+P+S V SSFL IMK+RGY+K+F+V+DP RV  ITV+L
Sbjct: 5   ILNDALRSMVNAERRGKAAVELKPISTVISSFLQIMKNRGYVKNFEVYDPHRVGRITVEL 64

Query: 226 QGRVKDCRVLTYRQDIKARDIENYRLRTLPTRQWGYVVISTPNGLLDHEEAIRQNVGGQV 405
           QGR+ DC+ LTYRQD+KARDIE YRL+TLPT QWGYVVISTP+G+LDHEEAIR+NVGGQV
Sbjct: 65  QGRINDCKALTYRQDLKARDIEAYRLKTLPTNQWGYVVISTPDGVLDHEEAIRKNVGGQV 124

Query: 406 IGFFY 420
           +G+F+
Sbjct: 125 LGYFH 129


Top