BLASTX nr result

ID: Cnidium21_contig00008356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008356
         (1523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303979.1| predicted protein [Populus trichocarpa] gi|2...   271   3e-70
ref|XP_002285765.1| PREDICTED: uncharacterized protein LOC100250...   265   2e-68
ref|XP_002297615.1| predicted protein [Populus trichocarpa] gi|2...   265   3e-68
ref|XP_002523395.1| zinc finger protein, putative [Ricinus commu...   262   2e-67
ref|XP_003601604.1| RING finger protein [Medicago truncatula] gi...   260   8e-67

>ref|XP_002303979.1| predicted protein [Populus trichocarpa] gi|222841411|gb|EEE78958.1|
            predicted protein [Populus trichocarpa]
          Length = 356

 Score =  271 bits (694), Expect = 3e-70
 Identities = 142/229 (62%), Positives = 156/229 (68%), Gaps = 13/229 (5%)
 Frame = +2

Query: 470  ATIFQLLQGIRAGIQSETENNGEXXXXXXXXXXXXXXXXXVILINPFNQTIIVQSSYGSG 649
            ATI QLLQGIRAGI      N E                 VILINPFNQ+IIVQ SY S 
Sbjct: 119  ATILQLLQGIRAGILVSESENLEGDRDRDRVRDMNRERERVILINPFNQSIIVQGSYDSN 178

Query: 650  N-NTGSQNPVGSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAVEALPTVKVEGNLQ 826
            N    +QN +GSLGDY IGPGLDLLLQHLAENDPNRYGTPPAQKEA+EALPTV V+  LQ
Sbjct: 179  NVQNQNQNAIGSLGDYVIGPGLDLLLQHLAENDPNRYGTPPAQKEAIEALPTVTVKEPLQ 238

Query: 827  CSVCLEDFEVGAEAKEMPCKHRFHSECIFPWLELHSSCPVCRHQLPCDESKLDNISSR-- 1000
            CSVCL+DFE+GAEA+EMPCKH+FHS CI PWLELHSSCPVCRHQLP DESKLD+  SR  
Sbjct: 239  CSVCLDDFEIGAEAREMPCKHKFHSGCILPWLELHSSCPVCRHQLPADESKLDSERSRNT 298

Query: 1001 ----------XXXXXXXXXXXXXXDVEGTNGTPRRFNVPWPFSNLFSSS 1117
                                    D EG +G  RRF+ PWPF++LFSSS
Sbjct: 299  FDQRDSESTNSESNISNGINVEEGDGEGRSGNGRRFSFPWPFNSLFSSS 347



 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 40/76 (52%), Positives = 51/76 (67%)
 Frame = +2

Query: 71  FWCHMCNQMVDPVMEVESIKCPLCQGGFVEEIETATAANPFRGNNNHSAEFGGVEGLDSD 250
           +WCHMC+QMV+P+M VE IKCP CQ GF+E++  +T       N    +EFG      SD
Sbjct: 5   YWCHMCSQMVNPIMGVE-IKCPFCQNGFIEDMIDSTG-----DNQVPDSEFG------SD 52

Query: 251 HSLSLWAPILLGMMSN 298
            +LSLWAPILLGM+ N
Sbjct: 53  RALSLWAPILLGMVGN 68


>ref|XP_002285765.1| PREDICTED: uncharacterized protein LOC100250148 isoform 1 [Vitis
            vinifera] gi|225435818|ref|XP_002285766.1| PREDICTED:
            uncharacterized protein LOC100250148 isoform 2 [Vitis
            vinifera]
          Length = 368

 Score =  265 bits (678), Expect = 2e-68
 Identities = 138/227 (60%), Positives = 160/227 (70%), Gaps = 7/227 (3%)
 Frame = +2

Query: 470  ATIFQLLQGIRAGIQSETENNGEXXXXXXXXXXXXXXXXXVILINPFNQTIIVQSSYGSG 649
            ATI QLLQGIRAG+ SE+EN+ E                 +ILINPFNQTIIVQ S+ S 
Sbjct: 121  ATILQLLQGIRAGMVSESENS-ENDRDRDRDRERERERERLILINPFNQTIIVQGSFDSN 179

Query: 650  N-NTGSQNPVGSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAVEALPTVKVEGNLQ 826
                 +QN +GSLGDYFIGP LDLLLQHLAENDPNRYGTPPAQK+A+EA+PTVK++ NLQ
Sbjct: 180  QAQNQNQNTIGSLGDYFIGPSLDLLLQHLAENDPNRYGTPPAQKDAIEAMPTVKIKENLQ 239

Query: 827  CSVCLEDFEVGAEAKEMPCKHRFHSECIFPWLELHSSCPVCRHQLPCDESKLD-----NI 991
            CSVCL+DFE+GAEA+EMPCKH+FHS CI PWLELHSSCPVCR Q+  DESKLD     N+
Sbjct: 240  CSVCLDDFEIGAEAREMPCKHKFHSGCILPWLELHSSCPVCRFQIAADESKLDSDASPNV 299

Query: 992  SSR-XXXXXXXXXXXXXXDVEGTNGTPRRFNVPWPFSNLFSSSGSPT 1129
            SS                D +G +G  RR    WPF++LFSS GS T
Sbjct: 300  SSNSSERSNNGHGSSEEGDGDGRSGNGRRSTFRWPFTSLFSSQGSQT 346



 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 38/77 (49%), Positives = 52/77 (67%)
 Frame = +2

Query: 71  FWCHMCNQMVDPVMEVESIKCPLCQGGFVEEIETATAANPFRGNNNHSAEFGGVEGLDSD 250
           +WCH C+Q+V+P+ E E  KCPLCQ GF+E+I+   +    R +N+  ++      L SD
Sbjct: 9   YWCHSCSQVVNPIAEAEP-KCPLCQDGFIEDIDGTAS----RDHNDSDSD------LASD 57

Query: 251 HSLSLWAPILLGMMSNP 301
            +LSLWAPILLGMM NP
Sbjct: 58  RTLSLWAPILLGMMGNP 74


>ref|XP_002297615.1| predicted protein [Populus trichocarpa] gi|222844873|gb|EEE82420.1|
            predicted protein [Populus trichocarpa]
          Length = 340

 Score =  265 bits (676), Expect = 3e-68
 Identities = 137/229 (59%), Positives = 155/229 (67%), Gaps = 13/229 (5%)
 Frame = +2

Query: 470  ATIFQLLQGIRAGIQSETENNGEXXXXXXXXXXXXXXXXXVILINPFNQTIIVQSSYGSG 649
            ATI QLLQGIRAGI +    N E                 VILINPFNQ IIVQ SY S 
Sbjct: 107  ATILQLLQGIRAGILASESENSEGDRDGERDRDRDRDRERVILINPFNQNIIVQGSYDSN 166

Query: 650  NNTG-SQNPVGSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAVEALPTVKVEGNLQ 826
            N+   +QNPVGS GDYFIGPGLDLLLQHLA+NDPNRYGT PAQKEAVEALPTV ++  LQ
Sbjct: 167  NDENQNQNPVGSFGDYFIGPGLDLLLQHLADNDPNRYGTLPAQKEAVEALPTVIIKEPLQ 226

Query: 827  CSVCLEDFEVGAEAKEMPCKHRFHSECIFPWLELHSSCPVCRHQLPCDESKLDNISSR-- 1000
            CSVCL+DFE+G++A+EMPCKH+FHS CI PWLELHSSCPVCRHQLP DESKLD+  +R  
Sbjct: 227  CSVCLDDFEIGSKAREMPCKHKFHSGCILPWLELHSSCPVCRHQLPADESKLDSERARNS 286

Query: 1001 ----------XXXXXXXXXXXXXXDVEGTNGTPRRFNVPWPFSNLFSSS 1117
                                    D E  +G  R F+ PWPF++LFSSS
Sbjct: 287  SDRREFENTNSESNISHGISVEEGDSEERSGNGRSFSFPWPFNSLFSSS 335



 Score = 65.5 bits (158), Expect = 4e-08
 Identities = 37/68 (54%), Positives = 44/68 (64%)
 Frame = +2

Query: 95  MVDPVMEVESIKCPLCQGGFVEEIETATAANPFRGNNNHSAEFGGVEGLDSDHSLSLWAP 274
           MV+PVMEVE IKCP CQ GF+EE+ ++T            +EFG      SD +LSLWAP
Sbjct: 1   MVNPVMEVE-IKCPFCQSGFIEEMSSSTGDTQVP-----DSEFG------SDRALSLWAP 48

Query: 275 ILLGMMSN 298
           ILLGMM N
Sbjct: 49  ILLGMMGN 56


>ref|XP_002523395.1| zinc finger protein, putative [Ricinus communis]
            gi|223537345|gb|EEF38974.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 394

 Score =  262 bits (670), Expect = 2e-67
 Identities = 138/244 (56%), Positives = 156/244 (63%), Gaps = 28/244 (11%)
 Frame = +2

Query: 470  ATIFQLLQGIRAGIQSETENN-GEXXXXXXXXXXXXXXXXXVILINPFNQTIIVQSSYGS 646
            ATI QLLQGIRAG+ SE+EN+ G+                 VILINP N+TII Q SY S
Sbjct: 120  ATILQLLQGIRAGMASESENSEGDRDRDGDRDRERDRERDRVILINPSNRTIIFQGSYDS 179

Query: 647  GNNTGSQN-PVGSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAVEALPTVKVEGNL 823
             N  G  N P+GSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEA+EALPTV ++   
Sbjct: 180  SNGQGQNNAPIGSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAIEALPTVTIKNTS 239

Query: 824  QCSVCLEDFEVGAEAKEMPCKHRFHSECIFPWLELHSSCPVCRHQLPCDESKLD------ 985
            QCSVCL+DFE+G EAKEMPCKHRFH  CI PWLELHSSCPVCR QLP +ESK D      
Sbjct: 240  QCSVCLDDFEIGTEAKEMPCKHRFHDVCILPWLELHSSCPVCRFQLPAEESKFDSAERLQ 299

Query: 986  --------------------NISSRXXXXXXXXXXXXXXDVEGTNGTPRRFNVPWPFSNL 1105
                                NI++               + EG NG  RRF+  WPF++L
Sbjct: 300  NHSDQRGSYNNNISTTTSSNNINNNDDDDNNHSSNIEEGEGEGRNGNGRRFSFLWPFNSL 359

Query: 1106 FSSS 1117
            FSSS
Sbjct: 360  FSSS 363



 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 40/77 (51%), Positives = 52/77 (67%)
 Frame = +2

Query: 71  FWCHMCNQMVDPVMEVESIKCPLCQGGFVEEIETATAANPFRGNNNHSAEFGGVEGLDSD 250
           +WC++C+QMV+P+ME E IKCP C GGFVEE+ + T     R N    ++F       SD
Sbjct: 9   YWCYLCSQMVNPIMEAE-IKCPFCLGGFVEEMSSNT-----RDNQEPDSDFS------SD 56

Query: 251 HSLSLWAPILLGMMSNP 301
            +LSLWAP+LLGMM NP
Sbjct: 57  RALSLWAPVLLGMMGNP 73


>ref|XP_003601604.1| RING finger protein [Medicago truncatula] gi|355490652|gb|AES71855.1|
            RING finger protein [Medicago truncatula]
          Length = 352

 Score =  260 bits (664), Expect = 8e-67
 Identities = 138/226 (61%), Positives = 157/226 (69%), Gaps = 8/226 (3%)
 Frame = +2

Query: 470  ATIFQLLQGIRAGIQSETENNGEXXXXXXXXXXXXXXXXXVILINPFNQTIIVQSSYGSG 649
            ATI QLLQGIRAG+ SE+  N +                 VILINPFNQTIIVQ SY S 
Sbjct: 118  ATIQQLLQGIRAGLTSESHENTDSDDRVREREREH-----VILINPFNQTIIVQGSYDSN 172

Query: 650  NN-TGSQNPVGSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAVEALPTVKVEGNLQ 826
             + + + NP+G+LGDYF+GPGLDLLLQHL+ENDPNRYGTPPA KEAVE+LPTVK+  NLQ
Sbjct: 173  RDQSDNHNPIGALGDYFVGPGLDLLLQHLSENDPNRYGTPPAPKEAVESLPTVKINENLQ 232

Query: 827  CSVCLEDFEVGAEAKEMPCKHRFHSECIFPWLELHSSCPVCRHQLPCDESKLDNISS--- 997
            CSVCL+DFEVG+EAKEMPCKHRFHS CI PWLELHSSCPVCR QL  DE K D+  S   
Sbjct: 233  CSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRSQLRVDEPKQDSDVSRNH 292

Query: 998  ---RXXXXXXXXXXXXXXDVEGTNGT-PRRFNVPWPFSNLFSSSGS 1123
               R              D EG + +  RRF+ PWPF+ LFSSS S
Sbjct: 293  RNQRDDEIIGHANANAEGDSEGRSPSGGRRFSFPWPFNGLFSSSSS 338



 Score = 82.0 bits (201), Expect = 4e-13
 Identities = 41/77 (53%), Positives = 51/77 (66%)
 Frame = +2

Query: 71  FWCHMCNQMVDPVMEVESIKCPLCQGGFVEEIETATAANPFRGNNNHSAEFGGVEGLDSD 250
           +WCH C+Q+V PVM +E IKCPLCQ GF+EE+ +AT  +  +  N    +FG       D
Sbjct: 5   YWCHACSQIVSPVMGME-IKCPLCQSGFIEEMSSATGISDLQ--NTPETDFG------VD 55

Query: 251 HSLSLWAPILLGMMSNP 301
            S SLWAPILLGMM NP
Sbjct: 56  RSPSLWAPILLGMMGNP 72


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