BLASTX nr result

ID: Cnidium21_contig00008330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008330
         (1069 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277771.2| PREDICTED: poly(A) RNA polymerase GLD2-like ...   375   e-101
ref|XP_002524216.1| zinc finger protein, putative [Ricinus commu...   352   9e-95
ref|XP_003552863.1| PREDICTED: poly(A) RNA polymerase cid11-like...   350   4e-94
ref|XP_003537469.1| PREDICTED: poly(A) RNA polymerase GLD2-like ...   348   2e-93
ref|XP_004150639.1| PREDICTED: poly(A) RNA polymerase GLD2-like ...   340   3e-91

>ref|XP_002277771.2| PREDICTED: poly(A) RNA polymerase GLD2-like [Vitis vinifera]
           gi|296086183|emb|CBI31624.3| unnamed protein product
           [Vitis vinifera]
          Length = 453

 Score =  375 bits (962), Expect = e-101
 Identities = 188/283 (66%), Positives = 230/283 (81%)
 Frame = -1

Query: 850 MSSYSLVEQTLKNILPLINPTKDDWAMRFHIIEDVRDAVETVESLRGATVEPYGSFVSNL 671
           MS+++++E  LK+IL +INP+++DWA+R  +I D R AV++VESLRGATVEP+GSF+SNL
Sbjct: 1   MSTFNVLEIVLKDILLVINPSREDWAIRNQLIADFRTAVDSVESLRGATVEPFGSFLSNL 60

Query: 670 FTRWGDLDISIEILTGSHISNTAKKQKQSFLADVLQALRSKGTWRKLRFISNARVPFLKL 491
           +T+WGDLDISIE+  G++IS+  K+ KQ+ L  VL ALRSKG WRKL+FI NARVP +K 
Sbjct: 61  YTQWGDLDISIELPNGAYISSAGKRHKQTLLGHVLNALRSKGGWRKLQFIPNARVPIIKF 120

Query: 490 EHRLQSITCDISINSLHDQMKSKLLFWINGIDGRFRDMVLLVKEWATAHDINESKSGSLN 311
           E    +I+CD+SIN+L  QMKSK LFWI+GIDGRFRD+VLLVKEWA AHDIN SK+G+LN
Sbjct: 121 ESYHPNISCDVSINNLKGQMKSKFLFWISGIDGRFRDLVLLVKEWARAHDINNSKTGTLN 180

Query: 310 SYCLSLLVIFHFQTCVPAILPPLKELYPGDLAHDLRGVRTDAEKQIEETCAVNINRFQVN 131
           SY LSLLV+FH QTC PAILPPLKE+YPG++A DL GVR   E QIEET A NINRF+ +
Sbjct: 181 SYSLSLLVVFHLQTCRPAILPPLKEIYPGNVADDLIGVRAVVEGQIEETSAANINRFKRD 240

Query: 130 RSRASRQSNCSSLSDLLISFFAKFSDIDVRASEQGINPYSGQW 2
           RSRA    N SSLS+L ISF AKF DI  RASEQGI PY+GQW
Sbjct: 241 RSRA---PNRSSLSELFISFLAKFVDITSRASEQGICPYTGQW 280


>ref|XP_002524216.1| zinc finger protein, putative [Ricinus communis]
           gi|223536493|gb|EEF38140.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 493

 Score =  352 bits (903), Expect = 9e-95
 Identities = 172/283 (60%), Positives = 226/283 (79%)
 Frame = -1

Query: 850 MSSYSLVEQTLKNILPLINPTKDDWAMRFHIIEDVRDAVETVESLRGATVEPYGSFVSNL 671
           M+++S++E  L++ L +I P ++DWA+R  IIE+++D + ++ESLRGATVEP+GSFVSNL
Sbjct: 1   MNAHSVLEPILRDTLEVIKPLREDWAVRSKIIEELKDVIASIESLRGATVEPFGSFVSNL 60

Query: 670 FTRWGDLDISIEILTGSHISNTAKKQKQSFLADVLQALRSKGTWRKLRFISNARVPFLKL 491
           FTRWGDLDISI +  GS+IS+ AKK+KQ+ L +  +ALR KG WR+L+F+ NARVP LK 
Sbjct: 61  FTRWGDLDISIMLANGSYISSAAKKRKQNVLREFHKALRQKGGWRRLQFVPNARVPLLKF 120

Query: 490 EHRLQSITCDISINSLHDQMKSKLLFWINGIDGRFRDMVLLVKEWATAHDINESKSGSLN 311
           E   Q+I+CD+SI++L  Q+KS  LFW+N IDGRFRDMVLLVKEWA AH+IN  K+G+LN
Sbjct: 121 ESGRQNISCDVSIDNLQGQIKSNFLFWLNQIDGRFRDMVLLVKEWAKAHNINNPKTGTLN 180

Query: 310 SYCLSLLVIFHFQTCVPAILPPLKELYPGDLAHDLRGVRTDAEKQIEETCAVNINRFQVN 131
           SY LSLLVIFHFQTCVPAILPPLKE+YP ++  DL GVRT AE++I+ETC  NI R+  +
Sbjct: 181 SYSLSLLVIFHFQTCVPAILPPLKEIYPRNVVDDLTGVRTVAEERIKETCNANIARYMSD 240

Query: 130 RSRASRQSNCSSLSDLLISFFAKFSDIDVRASEQGINPYSGQW 2
           + RA    N SSLS+L ISFFAKFS I ++A++ GI  ++GQW
Sbjct: 241 KYRA---VNRSSLSELFISFFAKFSGISLKAADLGICTFTGQW 280


>ref|XP_003552863.1| PREDICTED: poly(A) RNA polymerase cid11-like [Glycine max]
          Length = 415

 Score =  350 bits (897), Expect = 4e-94
 Identities = 173/283 (61%), Positives = 217/283 (76%)
 Frame = -1

Query: 850 MSSYSLVEQTLKNILPLINPTKDDWAMRFHIIEDVRDAVETVESLRGATVEPYGSFVSNL 671
           MS++S ++  + +IL ++ P ++DW +RF II D+R  VE+VESLRGATVEP+GSFVSNL
Sbjct: 1   MSTHSTLDIVVNDILRVVTPVQEDWEIRFAIINDLRSIVESVESLRGATVEPFGSFVSNL 60

Query: 670 FTRWGDLDISIEILTGSHISNTAKKQKQSFLADVLQALRSKGTWRKLRFISNARVPFLKL 491
           FTRWGDLDISIE+  G HIS+  KKQKQ+FL DVL+ALR KG    L+FISNARVP LK 
Sbjct: 61  FTRWGDLDISIELSNGLHISSAGKKQKQTFLGDVLKALRMKGGGSNLQFISNARVPILKF 120

Query: 490 EHRLQSITCDISINSLHDQMKSKLLFWINGIDGRFRDMVLLVKEWATAHDINESKSGSLN 311
           +   Q ++CDISIN+L  QMKSK+L WIN IDGRFR MVLLVKEWA AH IN SK+G+ N
Sbjct: 121 KSYRQGVSCDISINNLPGQMKSKILLWINKIDGRFRHMVLLVKEWAKAHKINNSKAGTFN 180

Query: 310 SYCLSLLVIFHFQTCVPAILPPLKELYPGDLAHDLRGVRTDAEKQIEETCAVNINRFQVN 131
           SY LSLLVIF+FQTC+PAI PPLK++YPG++  DL GVR+DAE  I +TC  NINRF  N
Sbjct: 181 SYSLSLLVIFYFQTCIPAIFPPLKDIYPGNMVDDLIGVRSDAENLIAQTCDANINRFISN 240

Query: 130 RSRASRQSNCSSLSDLLISFFAKFSDIDVRASEQGINPYSGQW 2
           R+R+    N  S+++L + F  KF+ +D  A + GI PYSG+W
Sbjct: 241 RARS---INRKSVAELFVEFIGKFAKMDSMAVKMGICPYSGKW 280


>ref|XP_003537469.1| PREDICTED: poly(A) RNA polymerase GLD2-like [Glycine max]
          Length = 328

 Score =  348 bits (892), Expect = 2e-93
 Identities = 172/283 (60%), Positives = 216/283 (76%)
 Frame = -1

Query: 850 MSSYSLVEQTLKNILPLINPTKDDWAMRFHIIEDVRDAVETVESLRGATVEPYGSFVSNL 671
           MS++S+++  + +IL ++ P ++DW +RF II D R  VE+VESLRGATVEPYGSFVSNL
Sbjct: 1   MSTHSMLDIVVNDILRVVTPLQEDWEIRFAIINDFRSIVESVESLRGATVEPYGSFVSNL 60

Query: 670 FTRWGDLDISIEILTGSHISNTAKKQKQSFLADVLQALRSKGTWRKLRFISNARVPFLKL 491
           FTRWGDLDISIE+  G HIS+  KKQKQ+ L +VL+ALR KG    L+FISNARVP LK 
Sbjct: 61  FTRWGDLDISIELSNGLHISSAGKKQKQTLLGEVLKALRMKGGGSNLQFISNARVPILKF 120

Query: 490 EHRLQSITCDISINSLHDQMKSKLLFWINGIDGRFRDMVLLVKEWATAHDINESKSGSLN 311
           +   Q ++CDISIN+L  QMKSK+L WIN IDGRFR MVLLVKEWA AH IN SK+G+ N
Sbjct: 121 KSYRQGVSCDISINNLPGQMKSKILLWINKIDGRFRHMVLLVKEWAKAHKINNSKAGTFN 180

Query: 310 SYCLSLLVIFHFQTCVPAILPPLKELYPGDLAHDLRGVRTDAEKQIEETCAVNINRFQVN 131
           SY LSLLVIF+FQTC+PAI PPLK++YPG++  DL G+R+DAE  I ETC  NINRF  N
Sbjct: 181 SYSLSLLVIFYFQTCIPAIFPPLKDIYPGNMIDDLIGIRSDAENLIAETCDANINRFISN 240

Query: 130 RSRASRQSNCSSLSDLLISFFAKFSDIDVRASEQGINPYSGQW 2
           R+R+    N  S+++L + F  KF+ +D  A E GI PY+G+W
Sbjct: 241 RARS---INRKSVAELFVDFVGKFAKMDSMAVEMGICPYTGKW 280


>ref|XP_004150639.1| PREDICTED: poly(A) RNA polymerase GLD2-like [Cucumis sativus]
           gi|449516431|ref|XP_004165250.1| PREDICTED: poly(A) RNA
           polymerase GLD2-like [Cucumis sativus]
          Length = 464

 Score =  340 bits (873), Expect = 3e-91
 Identities = 160/277 (57%), Positives = 212/277 (76%)
 Frame = -1

Query: 832 VEQTLKNILPLINPTKDDWAMRFHIIEDVRDAVETVESLRGATVEPYGSFVSNLFTRWGD 653
           +++ +K+IL ++ P +DDW  RF +I ++R+ V+++ESLRGAT+EP+GSFVSNLF+RWGD
Sbjct: 6   LDRVIKDILRVVEPLQDDWTARFQVINELRNVVQSIESLRGATIEPFGSFVSNLFSRWGD 65

Query: 652 LDISIEILTGSHISNTAKKQKQSFLADVLQALRSKGTWRKLRFISNARVPFLKLEHRLQS 473
           LD+S+++  GS+ S   KK+KQ+ L D+  A R  G W KL+ I +ARVP LK+EH   +
Sbjct: 66  LDLSVQLNNGSYTSTAGKKRKQTLLRDIQNASRKNGRWYKLQLIPHARVPILKIEHIQHN 125

Query: 472 ITCDISINSLHDQMKSKLLFWINGIDGRFRDMVLLVKEWATAHDINESKSGSLNSYCLSL 293
           I+CDISI++L  Q+KSK+L W+N IDGRF DMVLLVKEWA AHDIN SK G+ NSY LSL
Sbjct: 126 ISCDISIDNLVGQIKSKILLWVNEIDGRFHDMVLLVKEWAKAHDINNSKQGTFNSYSLSL 185

Query: 292 LVIFHFQTCVPAILPPLKELYPGDLAHDLRGVRTDAEKQIEETCAVNINRFQVNRSRASR 113
           LVIFHFQTC PAI PPL+++YPG++  +L+GVR + E +I  TCA NI RF+      SR
Sbjct: 186 LVIFHFQTCSPAIFPPLRDIYPGNVVDNLKGVRAEVENEIARTCATNIARFK------SR 239

Query: 112 QSNCSSLSDLLISFFAKFSDIDVRASEQGINPYSGQW 2
            +N SSLS+L +SF AKFSDI  +ASE GI PY+GQW
Sbjct: 240 TANRSSLSELFVSFLAKFSDISSKASELGICPYTGQW 276


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