BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008321
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    94   2e-17
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    92   6e-17
ref|XP_002532715.1| conserved hypothetical protein [Ricinus comm...    92   6e-17
ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus ...    89   9e-16
ref|XP_002520466.1| ubiquitin-protein ligase, putative [Ricinus ...    86   4e-15

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 51/117 (43%), Positives = 71/117 (60%), Gaps = 3/117 (2%)
 Frame = +3

Query: 288 LIAEILCCLPVKTLLRFRCVSKPWCSLIDSTRFVKSHLKRSIECKTNTGVII--SGHIMY 461
           +IAEILC LP K LL  R VSKPWC+LID   FVK HLK S++  +N  +I+  + H+ Y
Sbjct: 8   MIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDTSSNLYIILRTTSHVHY 67

Query: 462 -SVPVDVGSLDNATAIEIDEPSKTLLRGTRVVDSCNGLHCLFNLEGDMFLWNPATRK 629
                ++   D  T  E++ P      G +V+ S NGL C+ N+  D+ +WNP+TRK
Sbjct: 68  MDFEQNLVLNDCVTLKELNHPLMCYNHGIKVLGSVNGLLCISNVVDDIAVWNPSTRK 124


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 50/113 (44%), Positives = 66/113 (58%)
 Frame = +3

Query: 288 LIAEILCCLPVKTLLRFRCVSKPWCSLIDSTRFVKSHLKRSIECKTNTGVIISGHIMYSV 467
           +IAEILC L  K LL  RCVSK W +LIDS  F+  HL  SIE   N  +I+    +YS+
Sbjct: 8   MIAEILCRLTAKKLLCCRCVSKRWRTLIDSPTFIYLHLNHSIESPCNLSIILKSSELYSL 67

Query: 468 PVDVGSLDNATAIEIDEPSKTLLRGTRVVDSCNGLHCLFNLEGDMFLWNPATR 626
             D+  LDN     +D P      G +++ SCNGL C+ N+  D+ LWNP+ R
Sbjct: 68  SFDL--LDNIQ--PLDHPLMCYNHGVKILGSCNGLLCICNIVDDIALWNPSIR 116


>ref|XP_002532715.1| conserved hypothetical protein [Ricinus communis]
           gi|223527542|gb|EEF29664.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 51/117 (43%), Positives = 74/117 (63%), Gaps = 1/117 (0%)
 Frame = +3

Query: 282 EHLIAEILCCLPVKTLLRFRCVSKPWCSLIDSTRFVKSHLKRSIECKTNTGVIISGHIMY 461
           + +++++L  LPVK LLRFRC+SKP CSLIDS  F+  HL  S++ ++N  +I+    +Y
Sbjct: 6   DDIVSDVLLLLPVKALLRFRCLSKPLCSLIDSPDFIDHHLSHSLKTRSNLFLILRDWNLY 65

Query: 462 SVPVD-VGSLDNATAIEIDEPSKTLLRGTRVVDSCNGLHCLFNLEGDMFLWNPATRK 629
           ++  D + S+  A A  +  P +    GT  V SCNGL  L N E D+ L+NPATRK
Sbjct: 66  TLDFDSLSSVSPAAADVLIHPLQK-GGGTEAVGSCNGLLALRNSERDLALYNPATRK 121


>ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534616|gb|EEF36313.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 414

 Score = 88.6 bits (218), Expect = 9e-16
 Identities = 51/118 (43%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
 Frame = +3

Query: 288 LIAEILCCLPVKTLLRFRCVSKPWCSLIDSTRFVKSHLKRSIECKTNTGVIISG-HIMYS 464
           L+ EIL  LPV  LLRFR +SK WC+ ID   F+K+HLK+S E  +N  +I +G H  Y 
Sbjct: 9   LLTEILTRLPVDCLLRFRSISKSWCAKIDDPNFIKTHLKKSRETNSNLTLIFAGSHPDYF 68

Query: 465 VPVDVGSLDNATAIEIDEPSK---TLLRGTRVVDSCNGLHCLFNLEGDMFLWNPATRK 629
             V++ SL+  + I+++ P K         ++V SCNGL C  N  G + L NP+TRK
Sbjct: 69  YNVNLDSLN--SIIKLENPIKGPTDASHNIKIVGSCNGLLCFGNASGRITLMNPSTRK 124


>ref|XP_002520466.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223540308|gb|EEF41879.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 358

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 48/118 (40%), Positives = 68/118 (57%), Gaps = 6/118 (5%)
 Frame = +3

Query: 288 LIAEILCCLPVKTLLRFRCVSKPWCSLIDSTRFVKSHLKRSIECKTNTGVIISGH----- 452
           +I ++L  LPVKTLLRFRC+SK +C+LID+  F+K+HL  SI+ K    +I+  H     
Sbjct: 8   IIFDVLLRLPVKTLLRFRCISKSYCTLIDNPDFIKAHLDTSIQTKPRKKLILLRHQSNGV 67

Query: 453 -IMYSVPVDVGSLDNATAIEIDEPSKTLLRGTRVVDSCNGLHCLFNLEGDMFLWNPAT 623
              Y+   + G +D    I++  P K+   GTR+V SCN L  L      + LWNP T
Sbjct: 68  AEFYAADHNGGLID---PIKLKSPIKSKSNGTRIVGSCNSLVLLMQNTDKLLLWNPFT 122