BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008320
         (2444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513582.1| polypyrimidine tract binding protein, putati...    85   8e-14
ref|XP_002533645.1| ATATH9, putative [Ricinus communis] gi|22352...    69   1e-13
ref|NP_001078750.1| polypyrimidine tract-binding protein 2 [Arab...    84   1e-13
ref|XP_002317750.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-13
gb|ABK95840.1| unknown [Populus trichocarpa]                           83   3e-13

>ref|XP_002513582.1| polypyrimidine tract binding protein, putative [Ricinus communis]
           gi|223547490|gb|EEF48985.1| polypyrimidine tract binding
           protein, putative [Ricinus communis]
          Length = 447

 Score = 85.1 bits (209), Expect = 8e-14
 Identities = 52/104 (50%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
 Frame = -3

Query: 675 FGFEHHGPTH*NHLIGCQQVMMIKDRYTARALLLATIYVYENSLVLLLFFHSRTSVNYLI 496
           FGF H   T      G Q ++   D  TA +         +N+L        R    YL+
Sbjct: 137 FGFVHKITTF-EKTAGFQALVQFSDAETASSA--------KNAL------DGRNIPRYLL 181

Query: 495 PE-LSPCSLKITYSAHTDLSVKFQSHRSRDYTNPSLPVNPSAID 367
           PE + PC+L+ITYSAHTDLSVKFQSHRSRDYTNP+LPV PSAID
Sbjct: 182 PEHIGPCTLRITYSAHTDLSVKFQSHRSRDYTNPNLPVAPSAID 225


>ref|XP_002533645.1| ATATH9, putative [Ricinus communis] gi|223526458|gb|EEF28733.1|
            ATATH9, putative [Ricinus communis]
          Length = 549

 Score = 68.9 bits (167), Expect(2) = 1e-13
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = -2

Query: 1864 DNQELDFLVEAKNSVKCMDNFRKLSPHIADYVYAPGI 1754
            D+QELDFLVEAKNS KC+ NFRKLSPHIADYVYAP +
Sbjct: 240  DHQELDFLVEAKNSEKCLHNFRKLSPHIADYVYAPKV 276



 Score = 35.8 bits (81), Expect(2) = 1e-13
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = -1

Query: 1757 NLSISKLVTMEYIEGAQINDLK 1692
            NLS SKL+TME+I+ AQ+ND+K
Sbjct: 279  NLSTSKLLTMEFIDAAQVNDVK 300


>ref|NP_001078750.1| polypyrimidine tract-binding protein 2 [Arabidopsis thaliana]
           gi|110737620|dbj|BAF00751.1| polypyrimidine
           tract-binding RNA transport protein-like [Arabidopsis
           thaliana] gi|332008936|gb|AED96319.1| polypyrimidine
           tract-binding protein 2 [Arabidopsis thaliana]
          Length = 329

 Score = 84.3 bits (207), Expect = 1e-13
 Identities = 55/120 (45%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
 Frame = -3

Query: 699 DRDRSLKGFGFEHHGPTH*NHLIGCQQVMMIKDRYTARALLLATIYVYENSLVLLLFFHS 520
           +R      FGF H   T      G Q ++   D  TA A  LA                 
Sbjct: 29  ERAHVFSAFGFVHKITTF-EKTAGYQALVQFTDAETATAAKLA--------------LDG 73

Query: 519 RTSVNYLIPE-LSPCSLKITYSAHTDLSVKFQSHRSRDYTNPSLPVNPSAIDVTP*MLLG 343
           R+   YL+ E +  CSLKITYSAHTDL+VKFQSHRSRDYTNP LPV PSAID T  + +G
Sbjct: 74  RSIPRYLLAETVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVAVG 133


>ref|XP_002317750.1| predicted protein [Populus trichocarpa] gi|222858423|gb|EEE95970.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score = 83.2 bits (204), Expect = 3e-13
 Identities = 52/104 (50%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
 Frame = -3

Query: 675 FGFEHHGPTH*NHLIGCQQVMMIKDRYTARALLLATIYVYENSLVLLLFFHSRTSVNYLI 496
           FGF H   T      G Q ++   D  TA +         +N+L        R   +YL+
Sbjct: 128 FGFVHKITTF-EKTAGFQALVQFSDAETASSA--------KNAL------DGRNIPSYLL 172

Query: 495 PE-LSPCSLKITYSAHTDLSVKFQSHRSRDYTNPSLPVNPSAID 367
           PE L PC+L+ITYSAHTDLSVKFQSHRSRDYTN +LPV PSAID
Sbjct: 173 PEHLGPCTLRITYSAHTDLSVKFQSHRSRDYTNANLPVAPSAID 216


>gb|ABK95840.1| unknown [Populus trichocarpa]
          Length = 442

 Score = 83.2 bits (204), Expect = 3e-13
 Identities = 52/104 (50%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
 Frame = -3

Query: 675 FGFEHHGPTH*NHLIGCQQVMMIKDRYTARALLLATIYVYENSLVLLLFFHSRTSVNYLI 496
           FGF H   T      G Q ++   D  TA +         +N+L        R   +YL+
Sbjct: 137 FGFVHKITTF-EKTAGFQALVQFSDAETASSA--------KNAL------DGRNIPSYLL 181

Query: 495 PE-LSPCSLKITYSAHTDLSVKFQSHRSRDYTNPSLPVNPSAID 367
           PE L PC+L+ITYSAHTDLSVKFQSHRSRDYTN +LPV PSAID
Sbjct: 182 PEHLGPCTLRITYSAHTDLSVKFQSHRSRDYTNANLPVAPSAID 225