BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008318
         (1461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containi...   687   0.0  
ref|XP_002331159.1| predicted protein [Populus trichocarpa] gi|1...   674   0.0  
ref|XP_002527905.1| pentatricopeptide repeat-containing protein,...   660   0.0  
ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containi...   635   e-180
ref|XP_002886593.1| pentatricopeptide repeat-containing protein ...   625   e-177

>ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
            [Vitis vinifera]
          Length = 489

 Score =  687 bits (1773), Expect = 0.0
 Identities = 334/458 (72%), Positives = 386/458 (84%)
 Frame = +3

Query: 69   HLEEALYKRLFKDGSSEISVRQQLNLFLKSKKKVYKWEVDDTLKILRTRNRFYPALKLSE 248
            +LEEALY RLFKDGSSE+SVRQQLN FLKS K+V+KWEV DT+K LR R RFYPALKLSE
Sbjct: 19   YLEEALYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDTVKKLRDRKRFYPALKLSE 78

Query: 249  SMAERGINKTVSDQAIHLDLVAKAKGISAAETYFVGLPETSKNHLTYGALLNCYCKESMT 428
            +MA+RG+N T+SDQAI+LDL+ K +G++AAE YF+ LPETSKNHLTYGALLNCYCKE +T
Sbjct: 79   TMAKRGMNMTISDQAIYLDLITKTRGVAAAENYFIDLPETSKNHLTYGALLNCYCKELLT 138

Query: 429  XXXXXXXXXXXXXNLGLTAMPYNSLMTMYTKTGQPERIPAIIQEMKSSDIMPDSYTYNVW 608
                          LGL++MPYNSLMT+YTK GQPE+IP IIQE+KS DIMPDSYTYN+W
Sbjct: 139  EKAEALMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTIIQELKSLDIMPDSYTYNIW 198

Query: 609  MRALAAVNDVSGVERVINEMKRDGRVAADWTTYSNLASIYVDAGQNVKAENALKELEKRN 788
            MRALAAVND+SGVERVI EMKRDGRVA+DWTTYSNLASIYVDAG   KAE ALKELEKRN
Sbjct: 199  MRALAAVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYVDAGVFEKAEKALKELEKRN 258

Query: 789  ACKDLSAFQFLITLYGRTGNLLEVYRVWRSLRLAFPRAANISYLNMIQVLVKLKDLQGAE 968
            AC+DL+AFQFLITLYGR GNLLEVYRVWRSLRLAFP+ AN+SYLNMIQVLV LKDL GAE
Sbjct: 259  ACRDLTAFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANVSYLNMIQVLVNLKDLPGAE 318

Query: 969  KCFSDWLSNCSTYDIRIANALIGAYVNEGLLDKAIELKAQSKKKGAKPNAKTWEIFLNYY 1148
            KCF +W S CS YDIR+ANALIGAY  +GLL+KA ELK  ++++GAKPNAKTWEIFL Y+
Sbjct: 319  KCFREWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHARRRGAKPNAKTWEIFLAYH 378

Query: 1149 LKEGDFKSAVDCVEKAISTGRGNGSKWIPQTEITRRLMGHFEQNKDVESAERFVEILKKA 1328
            LK  + K AVDCV  AISTGRG+G KW+P  EI    M HFEQ KDV+ AE F+EILK  
Sbjct: 379  LKNREMKQAVDCVANAISTGRGDGQKWVPSPEIIGVFMQHFEQEKDVDGAEGFLEILKST 438

Query: 1329 VDEVGADVFESLIRTYVGAGKTNPIMRRRIKMENVDLS 1442
            V+++G +VFESLIR Y  AG+T+P+MRRR+KMENV++S
Sbjct: 439  VEDLGVEVFESLIRIYAAAGRTSPVMRRRLKMENVEVS 476


>ref|XP_002331159.1| predicted protein [Populus trichocarpa] gi|118487894|gb|ABK95769.1|
            unknown [Populus trichocarpa] gi|222873242|gb|EEF10373.1|
            predicted protein [Populus trichocarpa]
          Length = 490

 Score =  674 bits (1740), Expect = 0.0
 Identities = 331/458 (72%), Positives = 381/458 (83%)
 Frame = +3

Query: 69   HLEEALYKRLFKDGSSEISVRQQLNLFLKSKKKVYKWEVDDTLKILRTRNRFYPALKLSE 248
            +LEEALY RLFK+GSSE+SVRQQLN FLKS K+V+KWEV DT+K LR+RN +YPA+KLSE
Sbjct: 20   YLEEALYVRLFKEGSSEVSVRQQLNQFLKSSKRVFKWEVGDTIKKLRSRNLYYPAVKLSE 79

Query: 249  SMAERGINKTVSDQAIHLDLVAKAKGISAAETYFVGLPETSKNHLTYGALLNCYCKESMT 428
            +M+ RG+NKTVSDQAIHLDLVAK +GI AAE YF+ LPETSKN  TYGALLNCYCKE MT
Sbjct: 80   TMSSRGMNKTVSDQAIHLDLVAKTRGIPAAENYFIDLPETSKNLRTYGALLNCYCKELMT 139

Query: 429  XXXXXXXXXXXXXNLGLTAMPYNSLMTMYTKTGQPERIPAIIQEMKSSDIMPDSYTYNVW 608
                         NLGL++M YNSLMT+YTK GQPERIPAIIQEMK+ ++MPDSYTYNVW
Sbjct: 140  EEAEALIEKMKELNLGLSSMSYNSLMTLYTKVGQPERIPAIIQEMKADNVMPDSYTYNVW 199

Query: 609  MRALAAVNDVSGVERVINEMKRDGRVAADWTTYSNLASIYVDAGQNVKAENALKELEKRN 788
            MRALAAVND+SGVERVI EMKRDGRVAA+WTTYSNLASIYVDAG   KAE ALKELEK N
Sbjct: 200  MRALAAVNDISGVERVIEEMKRDGRVAANWTTYSNLASIYVDAGYFDKAEKALKELEKIN 259

Query: 789  ACKDLSAFQFLITLYGRTGNLLEVYRVWRSLRLAFPRAANISYLNMIQVLVKLKDLQGAE 968
            A KDL AFQFLITLYGRTG L+EVYR+WRSLRLAFP+ ANISYLNMIQVLV LKD+ GAE
Sbjct: 260  ANKDLFAFQFLITLYGRTGKLIEVYRIWRSLRLAFPKTANISYLNMIQVLVNLKDVPGAE 319

Query: 969  KCFSDWLSNCSTYDIRIANALIGAYVNEGLLDKAIELKAQSKKKGAKPNAKTWEIFLNYY 1148
            KCF +W S CSTYDIR+AN +I AY  EGL+DKA ELK +++++GAKPN+KTWEIF +YY
Sbjct: 320  KCFREWESGCSTYDIRVANVVISAYAKEGLVDKAEELKERARRRGAKPNSKTWEIFCDYY 379

Query: 1149 LKEGDFKSAVDCVEKAISTGRGNGSKWIPQTEITRRLMGHFEQNKDVESAERFVEILKKA 1328
            LK GD K  VDC+  A+S GRGNG KW+P   I   LM HFEQ KDV+ AE  +EILKKA
Sbjct: 380  LKNGDVKLGVDCIANAVSAGRGNGQKWVPSPVIVGSLMAHFEQQKDVDGAEDLIEILKKA 439

Query: 1329 VDEVGADVFESLIRTYVGAGKTNPIMRRRIKMENVDLS 1442
            VD+V  +VFESLIRTY  AG+ + +MRRR+KMENV++S
Sbjct: 440  VDDVAVEVFESLIRTYAAAGRKSQLMRRRLKMENVEVS 477


>ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223532680|gb|EEF34462.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 490

 Score =  660 bits (1702), Expect = 0.0
 Identities = 328/471 (69%), Positives = 377/471 (80%)
 Frame = +3

Query: 30   FGXXXXXXXXXXXHLEEALYKRLFKDGSSEISVRQQLNLFLKSKKKVYKWEVDDTLKILR 209
            FG           +LEEALY RLFK+GSSE+ VR+QLN FLKS K+VYKWEV DTLK LR
Sbjct: 7    FGRTKNVAKRSKKYLEEALYFRLFKEGSSEVKVREQLNQFLKSSKRVYKWEVGDTLKKLR 66

Query: 210  TRNRFYPALKLSESMAERGINKTVSDQAIHLDLVAKAKGISAAETYFVGLPETSKNHLTY 389
            +R  +YPALKLSE+M++RG+NKTVSDQAIHLDLVAK +GI AAE +F+ LPETSKNHLTY
Sbjct: 67   SRGLYYPALKLSEAMSKRGMNKTVSDQAIHLDLVAKTRGIPAAEIFFIDLPETSKNHLTY 126

Query: 390  GALLNCYCKESMTXXXXXXXXXXXXXNLGLTAMPYNSLMTMYTKTGQPERIPAIIQEMKS 569
            GALLNCYC + MT             NLGL++M YNSLMT+YTK GQPERIP IIQEMKS
Sbjct: 127  GALLNCYCNQLMTEEAEALMEKMKELNLGLSSMSYNSLMTLYTKIGQPERIPGIIQEMKS 186

Query: 570  SDIMPDSYTYNVWMRALAAVNDVSGVERVINEMKRDGRVAADWTTYSNLASIYVDAGQNV 749
              IMPDSYTYNVWMRALAAVND+SG ERVI EMKRDGRVAADWTTYSNLASIYVDA    
Sbjct: 187  DSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTYSNLASIYVDAQLFE 246

Query: 750  KAENALKELEKRNACKDLSAFQFLITLYGRTGNLLEVYRVWRSLRLAFPRAANISYLNMI 929
            KAE  LKELEKRN  +D SAFQFLITLYGR GNL E+YR+WRSLRLAFP+ +NISYLNMI
Sbjct: 247  KAEKTLKELEKRNVHRDHSAFQFLITLYGRIGNLHELYRIWRSLRLAFPKTSNISYLNMI 306

Query: 930  QVLVKLKDLQGAEKCFSDWLSNCSTYDIRIANALIGAYVNEGLLDKAIELKAQSKKKGAK 1109
            QVLV LKDL GAEKCF +W SNCS YDIR+AN LI AY  +GLL+KA ELK ++  +GAK
Sbjct: 307  QVLVNLKDLPGAEKCFREWESNCSGYDIRVANVLIKAYAKKGLLEKAEELKERAIGRGAK 366

Query: 1110 PNAKTWEIFLNYYLKEGDFKSAVDCVEKAISTGRGNGSKWIPQTEITRRLMGHFEQNKDV 1289
            PNAKTWEIF +YY + GD K +V+C+  AIS GRG+G KWIP  E+    M HFEQ KDV
Sbjct: 367  PNAKTWEIFSDYYFENGDIKLSVECLANAISKGRGDGQKWIPSPEVVASFMAHFEQQKDV 426

Query: 1290 ESAERFVEILKKAVDEVGADVFESLIRTYVGAGKTNPIMRRRIKMENVDLS 1442
            + AE F+EILKKA D+V A+VFESLIRTY  AG+T+ ++RRR+KMENV++S
Sbjct: 427  DGAEGFIEILKKATDDVEANVFESLIRTYAAAGRTSQVLRRRLKMENVEVS 477


>ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770-like
            [Glycine max]
          Length = 490

 Score =  635 bits (1638), Expect = e-180
 Identities = 319/476 (67%), Positives = 379/476 (79%)
 Frame = +3

Query: 15   SFMHQFGXXXXXXXXXXXHLEEALYKRLFKDGSSEISVRQQLNLFLKSKKKVYKWEVDDT 194
            S M  +G           +LEEALY +LFKDGSS++ VRQ LN F+KS+K+VYKWEV DT
Sbjct: 2    SIMQLYGRSKSVVKRSKKYLEEALYMKLFKDGSSQLIVRQSLNNFVKSRKRVYKWEVGDT 61

Query: 195  LKILRTRNRFYPALKLSESMAERGINKTVSDQAIHLDLVAKAKGISAAETYFVGLPETSK 374
            LK LR R  + PALKLSE+MA+R + KTVSD AIHLDL+AKA+GI+AAE YFV LPE SK
Sbjct: 62   LKKLRDRKLYQPALKLSETMAKRNMIKTVSDHAIHLDLLAKARGITAAENYFVSLPEPSK 121

Query: 375  NHLTYGALLNCYCKESMTXXXXXXXXXXXXXNLGLTAMPYNSLMTMYTKTGQPERIPAII 554
            NHL YGALLNCYCKE MT             +L L++MPYNSLMT+YTK GQPE+IP++I
Sbjct: 122  NHLCYGALLNCYCKELMTEKSEGLMEKMKELSLPLSSMPYNSLMTLYTKVGQPEKIPSLI 181

Query: 555  QEMKSSDIMPDSYTYNVWMRALAAVNDVSGVERVINEMKRDGRVAADWTTYSNLASIYVD 734
            QEMK+S++M DSYTYNVWMRALAAVND+SGVERV +EMKR G+V  DWTTYSNLASI+VD
Sbjct: 182  QEMKASNVMLDSYTYNVWMRALAAVNDISGVERVHDEMKRGGQVTGDWTTYSNLASIFVD 241

Query: 735  AGQNVKAENALKELEKRNACKDLSAFQFLITLYGRTGNLLEVYRVWRSLRLAFPRAANIS 914
            AG   KAE ALKELEKRNA KDL+A+QFLITLYGRTGNL EVYRVWRSLRLAFP+ ANIS
Sbjct: 242  AGLFDKAEVALKELEKRNAFKDLTAYQFLITLYGRTGNLYEVYRVWRSLRLAFPKTANIS 301

Query: 915  YLNMIQVLVKLKDLQGAEKCFSDWLSNCSTYDIRIANALIGAYVNEGLLDKAIELKAQSK 1094
            YLNMIQVLV LKDL GAEKCF +W   C TYDIR+AN LI AYV   +L+KA ELK +++
Sbjct: 302  YLNMIQVLVNLKDLPGAEKCFREWECGCPTYDIRVANVLIRAYVKLDMLEKAEELKERAR 361

Query: 1095 KKGAKPNAKTWEIFLNYYLKEGDFKSAVDCVEKAISTGRGNGSKWIPQTEITRRLMGHFE 1274
            ++GAKPNAKT EIF++YYL +GDFK AVD + +AIS GRGNG KW+P + I   +M HFE
Sbjct: 362  RRGAKPNAKTLEIFMDYYLLKGDFKLAVDYLNEAISMGRGNGEKWVPSSRIISIMMRHFE 421

Query: 1275 QNKDVESAERFVEILKKAVDEVGADVFESLIRTYVGAGKTNPIMRRRIKMENVDLS 1442
            Q KDV+ AE F+EILKK+V+  G +VFESLIRTY  AG+ +  M+RR+KMENV++S
Sbjct: 422  QEKDVDGAEEFLEILKKSVESPGVEVFESLIRTYAAAGRISSAMQRRLKMENVEVS 477


>ref|XP_002886593.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297332434|gb|EFH62852.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 491

 Score =  625 bits (1613), Expect = e-177
 Identities = 299/458 (65%), Positives = 363/458 (79%)
 Frame = +3

Query: 69   HLEEALYKRLFKDGSSEISVRQQLNLFLKSKKKVYKWEVDDTLKILRTRNRFYPALKLSE 248
            ++EE LY RLFKDG +E+ VRQQLN FLK  K V+KWEV DT+K LR R  +YPALKLSE
Sbjct: 20   YIEEPLYHRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSE 79

Query: 249  SMAERGINKTVSDQAIHLDLVAKAKGISAAETYFVGLPETSKNHLTYGALLNCYCKESMT 428
             M ERG+NKTVSDQAIHLDLVAKA+GI+A E YFV LPETSK  LTYG+LLNCYCKE +T
Sbjct: 80   VMEERGMNKTVSDQAIHLDLVAKARGITAGENYFVDLPETSKTELTYGSLLNCYCKELLT 139

Query: 429  XXXXXXXXXXXXXNLGLTAMPYNSLMTMYTKTGQPERIPAIIQEMKSSDIMPDSYTYNVW 608
                         N+  ++M YNSLMT+YTKTGQ E++PA+IQE+K+ ++MPDSYTYNVW
Sbjct: 140  EKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGQTEKVPAMIQELKAENVMPDSYTYNVW 199

Query: 609  MRALAAVNDVSGVERVINEMKRDGRVAADWTTYSNLASIYVDAGQNVKAENALKELEKRN 788
            MRALAA ND+SGVERVI EM RDGRVA DWTTYSN+ASIYVDAG + KAE AL+ELE +N
Sbjct: 200  MRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKN 259

Query: 789  ACKDLSAFQFLITLYGRTGNLLEVYRVWRSLRLAFPRAANISYLNMIQVLVKLKDLQGAE 968
              +D +A+QFLITLYGR G L EVYR+WRSLRLA P+ +N++YLNMIQVLVKL DL GAE
Sbjct: 260  TQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAMPKTSNVAYLNMIQVLVKLNDLPGAE 319

Query: 969  KCFSDWLSNCSTYDIRIANALIGAYVNEGLLDKAIELKAQSKKKGAKPNAKTWEIFLNYY 1148
              F +W +NCSTYDIRI N LIGAY  EGL++KA ELK ++ ++G K NAKTWEIF++YY
Sbjct: 320  TLFKEWQANCSTYDIRIVNVLIGAYAKEGLIEKAKELKEKAPRRGGKANAKTWEIFMDYY 379

Query: 1149 LKEGDFKSAVDCVEKAISTGRGNGSKWIPQTEITRRLMGHFEQNKDVESAERFVEILKKA 1328
            +K GD   A++C+ KA+S G+G+G KWIP  E  R LM +FEQ KDV  AE  +EILK  
Sbjct: 380  VKSGDMAHALECMSKAVSIGKGDGGKWIPSQETVRTLMSYFEQKKDVNGAENLLEILKNG 439

Query: 1329 VDEVGADVFESLIRTYVGAGKTNPIMRRRIKMENVDLS 1442
             D +GA++FESLIRTY  AGK++P MRRR+KMENV+++
Sbjct: 440  TDNIGAEIFESLIRTYAAAGKSHPAMRRRLKMENVEVN 477