BLASTX nr result

ID: Cnidium21_contig00008291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008291
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32381.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_004173536.1| PREDICTED: polyadenylate-binding protein 2-l...    59   5e-07
ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-l...    59   5e-07
ref|XP_002510185.1| polyadenylate-binding protein, putative [Ric...    59   5e-07
ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula...    59   5e-07

>emb|CBI32381.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +2

Query: 128 ISVGRSQLYELFSRIGRVGYVQVCRDLTTRKSPGYGYVKYIKAQDE 265
           ++V  SQLY+LFS++G V  V+VCRDL+TR+S GYGYV Y   QDE
Sbjct: 39  LNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDE 84


>ref|XP_004173536.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
          Length = 83

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/45 (57%), Positives = 36/45 (80%)
 Frame = +2

Query: 128 ISVGRSQLYELFSRIGRVGYVQVCRDLTTRKSPGYGYVKYIKAQD 262
           ++V  SQLY++F+++G+V  V+VCRDLTTR+S GYGYV Y   QD
Sbjct: 38  LNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSNPQD 82


>ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
          Length = 654

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/45 (57%), Positives = 36/45 (80%)
 Frame = +2

Query: 128 ISVGRSQLYELFSRIGRVGYVQVCRDLTTRKSPGYGYVKYIKAQD 262
           ++V  SQLY++F+++G+V  V+VCRDLTTR+S GYGYV Y   QD
Sbjct: 38  LNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSNPQD 82


>ref|XP_002510185.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223550886|gb|EEF52372.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 658

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/45 (57%), Positives = 36/45 (80%)
 Frame = +2

Query: 128 ISVGRSQLYELFSRIGRVGYVQVCRDLTTRKSPGYGYVKYIKAQD 262
           ++V  SQLY++F+++G+V  V+VCRDLTTR+S GYGYV Y   QD
Sbjct: 46  LNVTDSQLYDVFNQVGQVVSVRVCRDLTTRRSLGYGYVNYTSPQD 90


>ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
           gi|355508977|gb|AES90119.1| Poly(A)-binding protein
           [Medicago truncatula]
          Length = 654

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/45 (60%), Positives = 36/45 (80%)
 Frame = +2

Query: 128 ISVGRSQLYELFSRIGRVGYVQVCRDLTTRKSPGYGYVKYIKAQD 262
           ++V  SQLY+LF+++G+V  V+VCRDLTTR+S GYGYV Y   QD
Sbjct: 43  MNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQD 87


Top