BLASTX nr result

ID: Cnidium21_contig00008290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008290
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300227.1| predicted protein [Populus trichocarpa] gi|2...   158   4e-37
ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-l...   158   5e-37
ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-l...   158   5e-37
ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula...   157   6e-37
ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-l...   157   1e-36

>ref|XP_002300227.1| predicted protein [Populus trichocarpa] gi|222847485|gb|EEE85032.1|
           predicted protein [Populus trichocarpa]
          Length = 644

 Score =  158 bits (400), Expect = 4e-37
 Identities = 83/135 (61%), Positives = 105/135 (77%), Gaps = 1/135 (0%)
 Frame = +1

Query: 1   FVEYDSEHGARKAIEQMNGMLINDKHVFVEPFLGKQETEMAADRFKFTKVSVKNLSEATT 180
           FV++DSE  A+KAIE++NGML+NDK V+V PFL KQE + A D+ +F  V VKNLSE TT
Sbjct: 157 FVQFDSEEAAQKAIEKLNGMLLNDKQVYVGPFLRKQERDTATDKMRFNNVFVKNLSETTT 216

Query: 181 EEVLFHIFGNFGKITSYSIGVIREGDGKSKC-GFVNFKDAYSAAKSVQALDGKIIDGKKW 357
           EE L   FG FG IT  SI V+R+GDGKSKC GFVNF++A  AAK+V+AL+GK ID K+W
Sbjct: 217 EEDLNKTFGEFGTIT--SIVVMRDGDGKSKCFGFVNFENAEDAAKAVEALNGKKIDDKEW 274

Query: 358 HVGEAQKRPEREHDI 402
            VG+AQK+ ERE ++
Sbjct: 275 FVGKAQKKYEREVEL 289



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 16/161 (9%)
 Frame = +1

Query: 1   FVEYDSEHGARKAIEQMNGMLINDKHVFVEPFLGKQETEM------------AADRFKFT 144
           FV +++   A KA+E +NG  I+DK  FV     K E E+            AAD+F+  
Sbjct: 248 FVNFENAEDAAKAVEALNGKKIDDKEWFVGKAQKKYEREVELKQRFEQSMKEAADKFQGA 307

Query: 145 KVSVKNLSEATTEEVLFHIFGNFGKITSYSIGVIREGDGKSK-CGFVNFKDAYSAAKSVQ 321
            + +KNL ++  +E L  +F  FG ITS    V+R+ +G S+  GFV F     A++++ 
Sbjct: 308 NLYIKNLDDSIGDEKLKELFSPFGTITSCK--VMRDPNGISRGSGFVAFSTPEEASRALL 365

Query: 322 ALDGKIIDGKKWHVGEAQKRPEREHDI---FYEKGPPAFLP 435
            ++GKI+  K  +V  AQ++ +R   +   F +  P A  P
Sbjct: 366 EMNGKIVVSKPLYVALAQRKEDRRARLQAQFSQMRPVAMAP 406


>ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
          Length = 651

 Score =  158 bits (399), Expect = 5e-37
 Identities = 80/135 (59%), Positives = 108/135 (80%), Gaps = 1/135 (0%)
 Frame = +1

Query: 1   FVEYDSEHGARKAIEQMNGMLINDKHVFVEPFLGKQETEMAADRFKFTKVSVKNLSEATT 180
           FV++D+E  A+KAIE++NGML+NDK V+V PFL KQE E AAD+ KF  V VKNLSE+TT
Sbjct: 163 FVQFDNEESAQKAIEKLNGMLLNDKQVYVGPFLRKQERESAADKAKFNNVFVKNLSESTT 222

Query: 181 EEVLFHIFGNFGKITSYSIGVIREGDGKSKC-GFVNFKDAYSAAKSVQALDGKIIDGKKW 357
           ++ L + FG FG IT  S  V+R+GDGKSKC GFVNF++A  AA++V+AL+GK  D K+W
Sbjct: 223 DDELKNTFGEFGTIT--SAVVMRDGDGKSKCFGFVNFENADDAARAVEALNGKNFDDKEW 280

Query: 358 HVGEAQKRPEREHDI 402
           +VG+AQK+ ERE+++
Sbjct: 281 YVGKAQKKSERENEL 295



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 47/194 (24%)
 Frame = +1

Query: 1   FVEYDSEHGARKAIEQMNGMLINDKHVFVEPFLGKQETEM------------AADRFKFT 144
           FV +++   A +A+E +NG   +DK  +V     K E E             AAD+++  
Sbjct: 254 FVNFENADDAARAVEALNGKNFDDKEWYVGKAQKKSERENELKQRFEQSMKEAADKYQGA 313

Query: 145 KVSVKNLSEATTEEVLFHIFGNFGKITSYSIGVIREGDGKSK-CGFVNFKDAYSAAKSVQ 321
            + VKNL ++  +E L  +F  FG ITS    V+R+ +G S+  GFV F     A++++ 
Sbjct: 314 NLYVKNLDDSIGDEKLKELFSPFGTITSCK--VMRDPNGLSRGSGFVAFSTPEEASRALL 371

Query: 322 ALDGKIIDGKKWHVGEAQKRPERE----------------------------------HD 399
            ++GK++  K  +V  AQ++ +R                                     
Sbjct: 372 EMNGKMVVSKPLYVTLAQRKEDRRARLQAQFAQMRPVGMPPSVGPRVPMYPPGGPGIGQQ 431

Query: 400 IFYEKGPPAFLPQK 441
           +FY +GPPA +P +
Sbjct: 432 LFYSQGPPAIIPSQ 445


>ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
          Length = 646

 Score =  158 bits (399), Expect = 5e-37
 Identities = 79/135 (58%), Positives = 108/135 (80%), Gaps = 1/135 (0%)
 Frame = +1

Query: 1   FVEYDSEHGARKAIEQMNGMLINDKHVFVEPFLGKQETEMAADRFKFTKVSVKNLSEATT 180
           FV++D+E  A+KAIE++NGML+NDK V+V PFL KQE E  AD+ KF  V VKNLSE+TT
Sbjct: 160 FVQFDNEESAQKAIEKLNGMLLNDKQVYVGPFLRKQERESTADKAKFNNVFVKNLSESTT 219

Query: 181 EEVLFHIFGNFGKITSYSIGVIREGDGKSKC-GFVNFKDAYSAAKSVQALDGKIIDGKKW 357
           ++ L ++FG FG IT  S  V+R+GDGKSKC GFVNF++A  AA++V+AL+GK  D K+W
Sbjct: 220 DDELKNVFGEFGTIT--SAVVMRDGDGKSKCFGFVNFENADDAARAVEALNGKKFDDKEW 277

Query: 358 HVGEAQKRPEREHDI 402
           +VG+AQK+ ERE+++
Sbjct: 278 YVGKAQKKSERENEL 292



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 47/194 (24%)
 Frame = +1

Query: 1   FVEYDSEHGARKAIEQMNGMLINDKHVFVEPFLGKQETEM------------AADRFKFT 144
           FV +++   A +A+E +NG   +DK  +V     K E E             AAD+++  
Sbjct: 251 FVNFENADDAARAVEALNGKKFDDKEWYVGKAQKKSERENELKQRFEQSMKEAADKYQGA 310

Query: 145 KVSVKNLSEATTEEVLFHIFGNFGKITSYSIGVIREGDGKSK-CGFVNFKDAYSAAKSVQ 321
            + VKNL ++  ++ L  +F  FG ITS    V+R+ +G S+  GFV F     A++++ 
Sbjct: 311 NLYVKNLDDSLGDDKLKELFSPFGTITSCK--VMRDPNGISRGSGFVAFSTPDEASRALL 368

Query: 322 ALDGKIIDGKKWHVGEAQKRPERE----------------------------------HD 399
            ++GK++  K  +V  AQ++ +R                                     
Sbjct: 369 EMNGKMVVSKPLYVTLAQRKEDRRARLQAQFAQMRPVGMPPSVGPRVPMYPPGGPGIGQQ 428

Query: 400 IFYEKGPPAFLPQK 441
           IFY +GPPA +P +
Sbjct: 429 IFYAQGPPAIIPSQ 442


>ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
           gi|355508977|gb|AES90119.1| Poly(A)-binding protein
           [Medicago truncatula]
          Length = 654

 Score =  157 bits (398), Expect = 6e-37
 Identities = 80/135 (59%), Positives = 104/135 (77%), Gaps = 1/135 (0%)
 Frame = +1

Query: 1   FVEYDSEHGARKAIEQMNGMLINDKHVFVEPFLGKQETEMAADRFKFTKVSVKNLSEATT 180
           FV++D+E  A+KAIE++NGML+NDK V+V PFL KQE E   DR KF  V VKNLSE+TT
Sbjct: 166 FVQFDTEEAAQKAIEKLNGMLLNDKQVYVGPFLRKQERESTGDRAKFNNVFVKNLSESTT 225

Query: 181 EEVLFHIFGNFGKITSYSIGVIREGDGKSKC-GFVNFKDAYSAAKSVQALDGKIIDGKKW 357
           ++ L   FG FG IT  S  V+R+GDGKSKC GFVNF+    AA++V+AL+GK ID K+W
Sbjct: 226 DDELKKTFGEFGTIT--SAVVMRDGDGKSKCFGFVNFESTDDAARAVEALNGKKIDDKEW 283

Query: 358 HVGEAQKRPEREHDI 402
           +VG+AQK+ EREH++
Sbjct: 284 YVGKAQKKSEREHEL 298



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 47/194 (24%)
 Frame = +1

Query: 1   FVEYDSEHGARKAIEQMNGMLINDKHVFVEPFLGKQETEM------------AADRFKFT 144
           FV ++S   A +A+E +NG  I+DK  +V     K E E             AAD+++  
Sbjct: 257 FVNFESTDDAARAVEALNGKKIDDKEWYVGKAQKKSEREHELKIKFEQSMKEAADKYQGA 316

Query: 145 KVSVKNLSEATTEEVLFHIFGNFGKITSYSIGVIREGDGKSK-CGFVNFKDAYSAAKSVQ 321
            + VKNL ++  +E L  +F ++G ITS    V+R+ +G S+  GFV F     A++++ 
Sbjct: 317 NLYVKNLDDSIADEKLKELFSSYGTITSCK--VMRDPNGVSRGSGFVAFSTPEEASRALL 374

Query: 322 ALDGKIIDGKKWHVGEAQKRPERE----------------------------------HD 399
            ++GK++  K  +V  AQ++ +R                                     
Sbjct: 375 EMNGKMVASKPLYVTLAQRKEDRRARLQAQFAQMRPVSMPPSVAPRMPMYPPGGPGMGQQ 434

Query: 400 IFYEKGPPAFLPQK 441
           IFY +GPPA +P +
Sbjct: 435 IFYGQGPPAIIPSQ 448



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 35/132 (26%), Positives = 69/132 (52%), Gaps = 1/132 (0%)
 Frame = +1

Query: 1   FVEYDSEHGARKAIEQMNGMLINDKHVFVEPFLGKQETEMAADRFKFTKVSVKNLSEATT 180
           +V Y +   A +A++ +N   +N++ + +         + +  +     + +KNL +A  
Sbjct: 79  YVNYSNPQDAARALDVLNFTPLNNRPIRIM----YSHRDPSIRKSGQGNIFIKNLDKAID 134

Query: 181 EEVLFHIFGNFGKITSYSIGVIREGDGKSK-CGFVNFKDAYSAAKSVQALDGKIIDGKKW 357
            + L   F +FG I S  + V  +G G+SK  GFV F    +A K+++ L+G +++ K+ 
Sbjct: 135 HKALHDTFSSFGNILSCKVAV--DGSGQSKGYGFVQFDTEEAAQKAIEKLNGMLLNDKQV 192

Query: 358 HVGEAQKRPERE 393
           +VG   ++ ERE
Sbjct: 193 YVGPFLRKQERE 204


>ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
           gi|449495630|ref|XP_004159899.1| PREDICTED:
           polyadenylate-binding protein 2-like [Cucumis sativus]
          Length = 649

 Score =  157 bits (396), Expect = 1e-36
 Identities = 79/135 (58%), Positives = 108/135 (80%), Gaps = 1/135 (0%)
 Frame = +1

Query: 1   FVEYDSEHGARKAIEQMNGMLINDKHVFVEPFLGKQETEMAADRFKFTKVSVKNLSEATT 180
           FV++D+E  A KAIE++NGML+NDK VFV PFL KQE E  +++ KF  V VKNL+E T+
Sbjct: 161 FVQFDTEEAALKAIEKLNGMLLNDKQVFVGPFLRKQERESVSEKTKFNNVFVKNLAETTS 220

Query: 181 EEVLFHIFGNFGKITSYSIGVIREGDGKSKC-GFVNFKDAYSAAKSVQALDGKIIDGKKW 357
           EE L ++FG FG IT  S+ V+R+G+GKSKC GFVNF++A  AA+SV+AL+GK +DGK+W
Sbjct: 221 EEDLKNMFGEFGPIT--SVVVMRDGEGKSKCFGFVNFENADDAARSVEALNGKKVDGKEW 278

Query: 358 HVGEAQKRPEREHDI 402
           +VG+AQK+ ERE ++
Sbjct: 279 YVGKAQKKSEREVEL 293



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 42/143 (29%), Positives = 77/143 (53%), Gaps = 13/143 (9%)
 Frame = +1

Query: 1   FVEYDSEHGARKAIEQMNGMLINDKHVFVEPFLGKQETEM------------AADRFKFT 144
           FV +++   A +++E +NG  ++ K  +V     K E E+            AAD+++  
Sbjct: 252 FVNFENADDAARSVEALNGKKVDGKEWYVGKAQKKSEREVELKSRFEQSVKEAADKYQGA 311

Query: 145 KVSVKNLSEATTEEVLFHIFGNFGKITSYSIGVIREGDGKSK-CGFVNFKDAYSAAKSVQ 321
            + VKNL ++  ++ L  +F  FG ITS    V+R+ +G S+  GFV F     AA+++ 
Sbjct: 312 NLYVKNLDDSIDDDKLKELFTGFGTITSCK--VMRDPNGISRGSGFVAFSSPEEAARALA 369

Query: 322 ALDGKIIDGKKWHVGEAQKRPER 390
            ++G++I  K  +V  AQ++ +R
Sbjct: 370 EMNGRMIVSKPLYVALAQRKEDR 392


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