BLASTX nr result

ID: Cnidium21_contig00008276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008276
         (946 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [V...   498   e-139
ref|XP_002320945.1| predicted protein [Populus trichocarpa] gi|2...   486   e-135
ref|XP_002515195.1| peptide chain release factor, putative [Rici...   485   e-135
ref|NP_182225.3| Peptide chain release factor 1 [Arabidopsis tha...   468   e-130
ref|XP_003520768.1| PREDICTED: peptide chain release factor 1-li...   468   e-130

>ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera]
           gi|297744098|emb|CBI37068.3| unnamed protein product
           [Vitis vinifera]
          Length = 392

 Score =  498 bits (1283), Expect = e-139
 Identities = 252/300 (84%), Positives = 272/300 (90%)
 Frame = -3

Query: 944 EIEDLKTLKSECQEDKAMQDMVIEELGQSKEEEKRLQNVLLMSLLPKDDADERDCILEVR 765
           EI+ LK+L +EC EDK M +M  EELGQ+ EEEKRLQN+LL SLLPKD+ADERDCILEVR
Sbjct: 82  EIDGLKSLMAECSEDKDMLNMAAEELGQAAEEEKRLQNLLLKSLLPKDEADERDCILEVR 141

Query: 764 AGTGGEEASLFAMDIFKMYERYSQKSGWKFEVVDITDSDLKGFKEASAAISGADVYGKLK 585
           AGTGGEEASLFAMDIFKMYE+YSQK+GWKFEVVDIT+SDLKG+KEAS AISG+ VYGKLK
Sbjct: 142 AGTGGEEASLFAMDIFKMYEKYSQKNGWKFEVVDITESDLKGYKEASGAISGSGVYGKLK 201

Query: 584 FESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVHLKTEDLRIDTYRSGGSGGQHA 405
           FESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDV L+ EDLRIDTYRSGGSGGQHA
Sbjct: 202 FESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHA 261

Query: 404 NTTNSAVRITHIPSGLTVAIQDERSQHMNXXXXXXXXXXXLYELERSRISLNRSKLRMAQ 225
           NTTNSAVRITHIPSG+TVAIQDERSQHMN           LYE+ERSRI  +RSKLRM Q
Sbjct: 262 NTTNSAVRITHIPSGMTVAIQDERSQHMNKAKALKVLCAKLYEIERSRIQKDRSKLRMEQ 321

Query: 224 IGSGDRSERIRTYNFPQGRVTDHRVGITHHSIQDVMEGENLDVFIDALLLQQEMNALASF 45
           IGSGDRSERIRTYNFPQGRVTDHRVGITHHS+ DVM+GENLDVFIDALLLQQEM+A+ASF
Sbjct: 322 IGSGDRSERIRTYNFPQGRVTDHRVGITHHSVNDVMQGENLDVFIDALLLQQEMDAIASF 381


>ref|XP_002320945.1| predicted protein [Populus trichocarpa] gi|222861718|gb|EEE99260.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score =  486 bits (1250), Expect = e-135
 Identities = 244/304 (80%), Positives = 273/304 (89%)
 Frame = -3

Query: 944 EIEDLKTLKSECQEDKAMQDMVIEELGQSKEEEKRLQNVLLMSLLPKDDADERDCILEVR 765
           EI+ L++L +EC EDK M DM  EEL Q+ EEEKRLQN+LL SLLP+DDADERDCILEVR
Sbjct: 55  EIDGLRSLMTECPEDKDMLDMANEELSQAMEEEKRLQNLLLKSLLPRDDADERDCILEVR 114

Query: 764 AGTGGEEASLFAMDIFKMYERYSQKSGWKFEVVDITDSDLKGFKEASAAISGADVYGKLK 585
           AG+GGEEASLFAMDIFKMYER+SQ +GWKFEVV IT+SDLKG+KEASAAISGADV+GKLK
Sbjct: 115 AGSGGEEASLFAMDIFKMYERFSQNNGWKFEVVYITESDLKGYKEASAAISGADVFGKLK 174

Query: 584 FESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVHLKTEDLRIDTYRSGGSGGQHA 405
           FESGIHRVQRVPVTEK GRVHTSAVSVAILPQADEVD+ L+ EDLRIDTYRSGGSGGQHA
Sbjct: 175 FESGIHRVQRVPVTEKLGRVHTSAVSVAILPQADEVDLQLRNEDLRIDTYRSGGSGGQHA 234

Query: 404 NTTNSAVRITHIPSGLTVAIQDERSQHMNXXXXXXXXXXXLYELERSRISLNRSKLRMAQ 225
           NTTNSAVRITH+P+G+TV+IQDERSQHMN           LYE+ERSR+ ++RS+LR  Q
Sbjct: 235 NTTNSAVRITHLPTGITVSIQDERSQHMNKSKALKVLCAKLYEMERSRLHMSRSRLRSEQ 294

Query: 224 IGSGDRSERIRTYNFPQGRVTDHRVGITHHSIQDVMEGENLDVFIDALLLQQEMNALASF 45
           IGSGDRSERIRTYNFPQGRVTDHRVGITHHSI DVM+GE+LDVFIDALLLQQEM+A+ASF
Sbjct: 295 IGSGDRSERIRTYNFPQGRVTDHRVGITHHSINDVMQGESLDVFIDALLLQQEMDAIASF 354

Query: 44  GSTQ 33
           GS +
Sbjct: 355 GSIE 358


>ref|XP_002515195.1| peptide chain release factor, putative [Ricinus communis]
            gi|223545675|gb|EEF47179.1| peptide chain release factor,
            putative [Ricinus communis]
          Length = 422

 Score =  485 bits (1248), Expect = e-135
 Identities = 244/304 (80%), Positives = 271/304 (89%)
 Frame = -3

Query: 944  EIEDLKTLKSECQEDKAMQDMVIEELGQSKEEEKRLQNVLLMSLLPKDDADERDCILEVR 765
            EI+ L++L +EC EDK M DM  EEL Q+ EEEKRLQNVLL SLLP DDADERDCILEVR
Sbjct: 119  EIDGLRSLMAECPEDKHMIDMANEELNQAIEEEKRLQNVLLKSLLPTDDADERDCILEVR 178

Query: 764  AGTGGEEASLFAMDIFKMYERYSQKSGWKFEVVDITDSDLKGFKEASAAISGADVYGKLK 585
            AGTGGEEASLF+MDIF+MYERYSQK GWKFEVVDIT+SDLKG+KEASAAISGA V+GKLK
Sbjct: 179  AGTGGEEASLFSMDIFRMYERYSQKKGWKFEVVDITESDLKGYKEASAAISGAGVFGKLK 238

Query: 584  FESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVHLKTEDLRIDTYRSGGSGGQHA 405
            FESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDV L+ EDLRIDTYRSGGSGGQHA
Sbjct: 239  FESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHA 298

Query: 404  NTTNSAVRITHIPSGLTVAIQDERSQHMNXXXXXXXXXXXLYELERSRISLNRSKLRMAQ 225
            NTTNSAVR+TH+P+G+TV+IQDERSQHMN           LYE+ERSRI ++RSKLR  Q
Sbjct: 299  NTTNSAVRVTHLPTGMTVSIQDERSQHMNKAKALKVLCAKLYEIERSRIQMSRSKLRSEQ 358

Query: 224  IGSGDRSERIRTYNFPQGRVTDHRVGITHHSIQDVMEGENLDVFIDALLLQQEMNALASF 45
            IGSGDRSERIRTYNFPQGRVTDHRVGITHH+I ++M+GE+LDVFIDALLLQQEM+A+ASF
Sbjct: 359  IGSGDRSERIRTYNFPQGRVTDHRVGITHHAINNMMQGESLDVFIDALLLQQEMDAIASF 418

Query: 44   GSTQ 33
               +
Sbjct: 419  SCAE 422


>ref|NP_182225.3| Peptide chain release factor 1 [Arabidopsis thaliana]
            gi|124301088|gb|ABN04796.1| At2g47020 [Arabidopsis
            thaliana] gi|330255695|gb|AEC10789.1| Peptide chain
            release factor 1 [Arabidopsis thaliana]
          Length = 413

 Score =  468 bits (1205), Expect = e-130
 Identities = 232/303 (76%), Positives = 266/303 (87%)
 Frame = -3

Query: 944  EIEDLKTLKSECQEDKAMQDMVIEELGQSKEEEKRLQNVLLMSLLPKDDADERDCILEVR 765
            EI+ LK+L SE  +DK M D+ + EL ++ EEEKRLQ +LL SLLPKD+ADERDCILEVR
Sbjct: 110  EIDGLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQTLLLKSLLPKDEADERDCILEVR 169

Query: 764  AGTGGEEASLFAMDIFKMYERYSQKSGWKFEVVDITDSDLKGFKEASAAISGADVYGKLK 585
            AGTGGEEASLFAMDIF+MYERYSQK GWKF++VDIT+SD+KG+KEASAAI GA VYGKLK
Sbjct: 170  AGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGYKEASAAICGASVYGKLK 229

Query: 584  FESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVHLKTEDLRIDTYRSGGSGGQHA 405
            FESGIHRVQR+P+TEKSGR+HTSA+SVAILPQADEVDV L+ EDLRIDTYRSGGSGGQHA
Sbjct: 230  FESGIHRVQRIPITEKSGRIHTSAISVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHA 289

Query: 404  NTTNSAVRITHIPSGLTVAIQDERSQHMNXXXXXXXXXXXLYELERSRISLNRSKLRMAQ 225
            NTTNSAVRI H+P+G+ V+IQDERSQHMN           LYE+ER RI  +RSKLR  Q
Sbjct: 290  NTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERLRIQSSRSKLRSDQ 349

Query: 224  IGSGDRSERIRTYNFPQGRVTDHRVGITHHSIQDVMEGENLDVFIDALLLQQEMNALASF 45
            IGSGDRS RIRTYNFPQGRVTDHRVGITHH+I+D+M+GENLD+FIDALLL+QEM+A+ASF
Sbjct: 350  IGSGDRSGRIRTYNFPQGRVTDHRVGITHHAIEDMMQGENLDMFIDALLLRQEMDAIASF 409

Query: 44   GST 36
             ST
Sbjct: 410  SST 412


>ref|XP_003520768.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 415

 Score =  468 bits (1205), Expect = e-130
 Identities = 233/304 (76%), Positives = 266/304 (87%)
 Frame = -3

Query: 944  EIEDLKTLKSECQEDKAMQDMVIEELGQSKEEEKRLQNVLLMSLLPKDDADERDCILEVR 765
            EI+ LK+L +EC EDK M +M  EE+GQ+ EEE++LQN+LL SLLPKDDADERDCILEVR
Sbjct: 112  EIDGLKSLMAECSEDKDMLNMATEEMGQAVEEERKLQNLLLKSLLPKDDADERDCILEVR 171

Query: 764  AGTGGEEASLFAMDIFKMYERYSQKSGWKFEVVDITDSDLKGFKEASAAISGADVYGKLK 585
            AGTGGEEASLFAMDIF+MYE+Y+ + GWKFEVVDI  SD KG+KEASAAI+G  V+ KLK
Sbjct: 172  AGTGGEEASLFAMDIFRMYEKYALEKGWKFEVVDIAQSDHKGYKEASAAIAGDGVFRKLK 231

Query: 584  FESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVHLKTEDLRIDTYRSGGSGGQHA 405
            FESGIHRVQRVPVTEKSGR+HTSAVSVAILPQADEVDV LK EDLRIDTYRSGGSGGQHA
Sbjct: 232  FESGIHRVQRVPVTEKSGRIHTSAVSVAILPQADEVDVQLKNEDLRIDTYRSGGSGGQHA 291

Query: 404  NTTNSAVRITHIPSGLTVAIQDERSQHMNXXXXXXXXXXXLYELERSRISLNRSKLRMAQ 225
            NTTNSAVR+THIP+G+ + IQDERSQHMN           LYE+ER R+  +RSKLR+ Q
Sbjct: 292  NTTNSAVRVTHIPTGIMITIQDERSQHMNKAKALKVLCAKLYEMERLRLRSSRSKLRLEQ 351

Query: 224  IGSGDRSERIRTYNFPQGRVTDHRVGITHHSIQDVMEGENLDVFIDALLLQQEMNALASF 45
            IGSGDRSERIRTYNFPQGRVTDHRVGIT+HS+ DVM+GENLDVFIDALLLQ+EM+A+A+F
Sbjct: 352  IGSGDRSERIRTYNFPQGRVTDHRVGITYHSVDDVMQGENLDVFIDALLLQEEMDAMATF 411

Query: 44   GSTQ 33
             S+Q
Sbjct: 412  SSSQ 415


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