BLASTX nr result

ID: Cnidium21_contig00008246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008246
         (1766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 h...   698   0.0  
emb|CAN60756.1| hypothetical protein VITISV_041986 [Vitis vinifera]   696   0.0  
ref|XP_002298619.1| chromatin remodeling complex subunit [Populu...   694   0.0  
ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 h...   694   0.0  
ref|XP_003524614.1| PREDICTED: SWI/SNF complex component SNF12 h...   683   0.0  

>ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Vitis vinifera]
          Length = 548

 Score =  698 bits (1802), Expect = 0.0
 Identities = 336/414 (81%), Positives = 377/414 (91%)
 Frame = -3

Query: 1284 KRPPQKLGRPPGLSSNNNVSPLRTMDLTSAARKKKQKLPEKHLQDKVAAFLPESALYTQL 1105
            ++PP    RPPG    N +SPL+ M+LT AAR+KKQKLPEK LQD+VAA LPESALYTQL
Sbjct: 127  QKPPV---RPPGPLGANTISPLKVMELTPAARRKKQKLPEKQLQDRVAAILPESALYTQL 183

Query: 1104 LDFESRIDAALARKRIDIQEALKNPPCIQKTLRIYVFNSFANQTRTIPGKPNAEPPTWTF 925
            L+FESR+DAALARK+IDIQEALKNPPC+QKTLRIY+FN+FANQ RTIP KPNAEPPTWT 
Sbjct: 184  LEFESRVDAALARKKIDIQEALKNPPCVQKTLRIYIFNTFANQIRTIPKKPNAEPPTWTL 243

Query: 924  KIIGRILEEGVDPENVAMHQKSNPMDPKFSSFFKRVTISLDQRLYPDNHIIIWESARSPA 745
            KIIGRILEEGVDP+  AM  KSN   PKFSSFFKRVTISLDQRLYPDN IIIWE+ARSPA
Sbjct: 244  KIIGRILEEGVDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIIIWENARSPA 303

Query: 744  PHEGFEVKRKGDKEFTLNVRLEVNYMPEKYKLSPALTALLGIEVETRSRIVAGIWHYVKA 565
            PHEGFEVKRKGDKEFT+N+RLE+NY+PEK+KLS AL  +LGIEV+TR RI+A IWHYVKA
Sbjct: 304  PHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKA 363

Query: 564  RKLQNPNDPSFFMCDPPLQKVFGEDKLKFSLVSQKISNHLAPPQPIHLEHRIKVSGNSPA 385
            RKLQNPNDPSFF CDPPLQKVFGEDK+KF++VSQKIS HL+PPQPIHLEH+IK+SGN PA
Sbjct: 364  RKLQNPNDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKIKLSGNCPA 423

Query: 384  GNACYDILVDVPFPIQKELNALLANTEKTKEIEACEEAVCTAIRKIHDHRKRRAFFLGFS 205
            GNACYD+LVDVPFPIQKEL+ALLANTEK KEI+AC+EA+C+AIRKIH+HR+RRAFFLGFS
Sbjct: 424  GNACYDVLVDVPFPIQKELSALLANTEKNKEIDACDEAICSAIRKIHEHRRRRAFFLGFS 483

Query: 204  QSPVEFVNALVESQSTDLKLVAGEASLNAEKEHRSDFYNQPWVEDAVIRYLNRR 43
            QSPVEF+N L+ESQS DLKLVAGEAS NAEKE RSDF+NQPWVEDAVIRYLNR+
Sbjct: 484  QSPVEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRK 537


>emb|CAN60756.1| hypothetical protein VITISV_041986 [Vitis vinifera]
          Length = 548

 Score =  696 bits (1797), Expect = 0.0
 Identities = 335/414 (80%), Positives = 376/414 (90%)
 Frame = -3

Query: 1284 KRPPQKLGRPPGLSSNNNVSPLRTMDLTSAARKKKQKLPEKHLQDKVAAFLPESALYTQL 1105
            ++PP    RPPG    N +SPL+ M+LT AAR+KKQKLPEK LQD+VAA LPESALYTQL
Sbjct: 127  QKPPV---RPPGPLGANTISPLKVMELTPAARRKKQKLPEKQLQDRVAAILPESALYTQL 183

Query: 1104 LDFESRIDAALARKRIDIQEALKNPPCIQKTLRIYVFNSFANQTRTIPGKPNAEPPTWTF 925
            L+FESR+DAALARK+IDIQEALKNPPC+QKTLRIY+FN+F NQ RTIP KPNAEPPTWT 
Sbjct: 184  LEFESRVDAALARKKIDIQEALKNPPCVQKTLRIYIFNTFXNQIRTIPKKPNAEPPTWTL 243

Query: 924  KIIGRILEEGVDPENVAMHQKSNPMDPKFSSFFKRVTISLDQRLYPDNHIIIWESARSPA 745
            KIIGRILEEGVDP+  AM  KSN   PKFSSFFKRVTISLDQRLYPDN IIIWE+ARSPA
Sbjct: 244  KIIGRILEEGVDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIIIWENARSPA 303

Query: 744  PHEGFEVKRKGDKEFTLNVRLEVNYMPEKYKLSPALTALLGIEVETRSRIVAGIWHYVKA 565
            PHEGFEVKRKGDKEFT+N+RLE+NY+PEK+KLS AL  +LGIEV+TR RI+A IWHYVKA
Sbjct: 304  PHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKA 363

Query: 564  RKLQNPNDPSFFMCDPPLQKVFGEDKLKFSLVSQKISNHLAPPQPIHLEHRIKVSGNSPA 385
            RKLQNPNDPSFF CDPPLQKVFGEDK+KF++VSQKIS HL+PPQPIHLEH+IK+SGN PA
Sbjct: 364  RKLQNPNDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKIKLSGNCPA 423

Query: 384  GNACYDILVDVPFPIQKELNALLANTEKTKEIEACEEAVCTAIRKIHDHRKRRAFFLGFS 205
            GNACYD+LVDVPFPIQKEL+ALLANTEK KEI+AC+EA+C+AIRKIH+HR+RRAFFLGFS
Sbjct: 424  GNACYDVLVDVPFPIQKELSALLANTEKNKEIDACDEAICSAIRKIHEHRRRRAFFLGFS 483

Query: 204  QSPVEFVNALVESQSTDLKLVAGEASLNAEKEHRSDFYNQPWVEDAVIRYLNRR 43
            QSPVEF+N L+ESQS DLKLVAGEAS NAEKE RSDF+NQPWVEDAVIRYLNR+
Sbjct: 484  QSPVEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRK 537


>ref|XP_002298619.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222845877|gb|EEE83424.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 555

 Score =  694 bits (1791), Expect = 0.0
 Identities = 331/415 (79%), Positives = 379/415 (91%), Gaps = 1/415 (0%)
 Frame = -3

Query: 1284 KRPPQK-LGRPPGLSSNNNVSPLRTMDLTSAARKKKQKLPEKHLQDKVAAFLPESALYTQ 1108
            KR PQK LGRPPG+  ++ VSPL+ MDL+SAAR+KKQKLPEK LQD+VAA LPESALYTQ
Sbjct: 130  KRLPQKPLGRPPGVPMSSMVSPLKPMDLSSAARRKKQKLPEKQLQDRVAAILPESALYTQ 189

Query: 1107 LLDFESRIDAALARKRIDIQEALKNPPCIQKTLRIYVFNSFANQTRTIPGKPNAEPPTWT 928
            LL+FE+R+DAALARK++DIQEALK+PPC+QKTLRIYVFN+FANQ RTIP KPNA+PPTWT
Sbjct: 190  LLEFETRVDAALARKKVDIQEALKSPPCVQKTLRIYVFNTFANQIRTIPKKPNADPPTWT 249

Query: 927  FKIIGRILEEGVDPENVAMHQKSNPMDPKFSSFFKRVTISLDQRLYPDNHIIIWESARSP 748
             K+IGRILE+GVDP+     QKSNP+ PKFSSFFKRV+I LDQRLYPDNHIIIWE ARSP
Sbjct: 250  LKVIGRILEDGVDPDQPGAVQKSNPLYPKFSSFFKRVSIQLDQRLYPDNHIIIWEHARSP 309

Query: 747  APHEGFEVKRKGDKEFTLNVRLEVNYMPEKYKLSPALTALLGIEVETRSRIVAGIWHYVK 568
            APHEGFEVKRKGDKEF++N+RLE+NY+PEK+KLSPAL  +LGIEVETR RI+A IWHYVK
Sbjct: 310  APHEGFEVKRKGDKEFSVNIRLEMNYVPEKFKLSPALMEVLGIEVETRPRIIAAIWHYVK 369

Query: 567  ARKLQNPNDPSFFMCDPPLQKVFGEDKLKFSLVSQKISNHLAPPQPIHLEHRIKVSGNSP 388
            ARKLQNP DPSFF CD PLQKVFGE K+KF++VSQ+IS HL+PPQPIHLEH+IK+SGNSP
Sbjct: 370  ARKLQNPEDPSFFNCDAPLQKVFGESKMKFTMVSQRISQHLSPPQPIHLEHKIKLSGNSP 429

Query: 387  AGNACYDILVDVPFPIQKELNALLANTEKTKEIEACEEAVCTAIRKIHDHRKRRAFFLGF 208
            AG  CYD++VDVPFPIQ+EL+ALLAN EK KEI+ C+EA+CTAIRKIH+HR+RRAFFLGF
Sbjct: 430  AGTVCYDVVVDVPFPIQRELSALLANAEKNKEIDTCDEAICTAIRKIHEHRRRRAFFLGF 489

Query: 207  SQSPVEFVNALVESQSTDLKLVAGEASLNAEKEHRSDFYNQPWVEDAVIRYLNRR 43
            SQSPVEFVNAL+ESQS DLKLVAGEAS NAEKE RSDF+NQPWVEDAVIRYLNR+
Sbjct: 490  SQSPVEFVNALIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRK 544


>ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis sativus]
            gi|449515744|ref|XP_004164908.1| PREDICTED: SWI/SNF
            complex component SNF12 homolog [Cucumis sativus]
          Length = 547

 Score =  694 bits (1790), Expect = 0.0
 Identities = 331/415 (79%), Positives = 379/415 (91%), Gaps = 1/415 (0%)
 Frame = -3

Query: 1284 KRPPQKLG-RPPGLSSNNNVSPLRTMDLTSAARKKKQKLPEKHLQDKVAAFLPESALYTQ 1108
            KR PQK   RPP LS     SPL+TM+LT AARKKKQKLPEK LQDKVAA LPESALYTQ
Sbjct: 122  KRIPQKPPVRPPILSPGTTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQ 181

Query: 1107 LLDFESRIDAALARKRIDIQEALKNPPCIQKTLRIYVFNSFANQTRTIPGKPNAEPPTWT 928
            LL+FESR+DAALARK++DI EALKNPPCIQKTLRIYVFN+FANQ  TIP KPNA+PPTWT
Sbjct: 182  LLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPKKPNADPPTWT 241

Query: 927  FKIIGRILEEGVDPENVAMHQKSNPMDPKFSSFFKRVTISLDQRLYPDNHIIIWESARSP 748
             KIIGRILE+G+DP++  + Q+SNP+ PKFSSFFKRVTISLDQRLYPD+HII+WE+ARSP
Sbjct: 242  LKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARSP 301

Query: 747  APHEGFEVKRKGDKEFTLNVRLEVNYMPEKYKLSPALTALLGIEVETRSRIVAGIWHYVK 568
            APHEGFEVKRKGDKEF++N+RLE+NY+PEK+KLSPAL  +LGIEV+TR RI+A IWHYVK
Sbjct: 302  APHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVK 361

Query: 567  ARKLQNPNDPSFFMCDPPLQKVFGEDKLKFSLVSQKISNHLAPPQPIHLEHRIKVSGNSP 388
            ARKLQNPNDPSFF CDPPLQKVFGEDKLKF++VSQ+IS HL PPQPIHLEH++K+SGNSP
Sbjct: 362  ARKLQNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKVKLSGNSP 421

Query: 387  AGNACYDILVDVPFPIQKELNALLANTEKTKEIEACEEAVCTAIRKIHDHRKRRAFFLGF 208
            AG ACYD+LVDVPFPI +EL+ALLAN EK KEI+AC+EA+CTAIRKIH+HR+RRAFFLGF
Sbjct: 422  AGTACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRRAFFLGF 481

Query: 207  SQSPVEFVNALVESQSTDLKLVAGEASLNAEKEHRSDFYNQPWVEDAVIRYLNRR 43
            SQSPVEF++AL+ESQS DLKL+AGEAS NAEKE RSDF+NQPWVEDAVIRY+NR+
Sbjct: 482  SQSPVEFIDALIESQSKDLKLLAGEASRNAEKERRSDFFNQPWVEDAVIRYINRK 536


>ref|XP_003524614.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Glycine max]
          Length = 543

 Score =  683 bits (1763), Expect = 0.0
 Identities = 327/413 (79%), Positives = 373/413 (90%)
 Frame = -3

Query: 1281 RPPQKLGRPPGLSSNNNVSPLRTMDLTSAARKKKQKLPEKHLQDKVAAFLPESALYTQLL 1102
            +PP    RP G S  N+ SPLR M+LT AAR+KKQKLPEK LQDKVAA LPESALYTQLL
Sbjct: 123  KPPM---RPVGFSPPNSFSPLRPMELTPAARRKKQKLPEKQLQDKVAAILPESALYTQLL 179

Query: 1101 DFESRIDAALARKRIDIQEALKNPPCIQKTLRIYVFNSFANQTRTIPGKPNAEPPTWTFK 922
            +FESR+DAALARK+ DIQEALKNPPCIQKTLRIYVFN+FANQ RTIP KPN EPPTWT K
Sbjct: 180  EFESRVDAALARKKADIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPNVEPPTWTLK 239

Query: 921  IIGRILEEGVDPENVAMHQKSNPMDPKFSSFFKRVTISLDQRLYPDNHIIIWESARSPAP 742
            I+GRILE+GVDP+   + QKS+P+ PKFS+FFKRVTISLDQRLYPDNHII+WE+ARSPAP
Sbjct: 240  IVGRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYPDNHIILWENARSPAP 299

Query: 741  HEGFEVKRKGDKEFTLNVRLEVNYMPEKYKLSPALTALLGIEVETRSRIVAGIWHYVKAR 562
            HEGFEVKRKGDKEFT+N+RLE+NY+PEK+KLSPALT +LGIEV+TR RIVA IWHYVKAR
Sbjct: 300  HEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSPALTEVLGIEVDTRPRIVAAIWHYVKAR 359

Query: 561  KLQNPNDPSFFMCDPPLQKVFGEDKLKFSLVSQKISNHLAPPQPIHLEHRIKVSGNSPAG 382
            KLQNPNDPS+F CDPPLQKVFGE+ +KF++VSQKIS+HL PPQPI LEH+IK+SGNSPAG
Sbjct: 360  KLQNPNDPSYFHCDPPLQKVFGEENMKFTMVSQKISSHLFPPQPILLEHKIKLSGNSPAG 419

Query: 381  NACYDILVDVPFPIQKELNALLANTEKTKEIEACEEAVCTAIRKIHDHRKRRAFFLGFSQ 202
             ACYD++VDVPFPIQ+EL+ALLAN EK K+IE C+EA+C  IRKIH+HR+RRAFFLGFSQ
Sbjct: 420  TACYDVMVDVPFPIQRELSALLANVEKNKDIETCDEAICGIIRKIHEHRRRRAFFLGFSQ 479

Query: 201  SPVEFVNALVESQSTDLKLVAGEASLNAEKEHRSDFYNQPWVEDAVIRYLNRR 43
            SPVEF+NAL+ESQS DLKLV+GE S NAEKE RSDF+NQPWVEDAVIRYLNR+
Sbjct: 480  SPVEFINALIESQSRDLKLVSGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRK 532


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