BLASTX nr result
ID: Cnidium21_contig00008244
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00008244
(1717 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521706.1| plant ubiquilin, putative [Ricinus communis]... 84 1e-17
ref|NP_565407.1| ubiquilin [Arabidopsis thaliana] gi|13430494|gb... 81 6e-17
ref|XP_002306425.1| predicted protein [Populus trichocarpa] gi|2... 84 3e-16
ref|NP_001150353.1| LOC100283983 [Zea mays] gi|195638608|gb|ACG3... 83 4e-16
ref|XP_001759037.1| predicted protein [Physcomitrella patens sub... 80 4e-16
>ref|XP_002521706.1| plant ubiquilin, putative [Ricinus communis]
gi|223539097|gb|EEF40693.1| plant ubiquilin, putative
[Ricinus communis]
Length = 548
Score = 84.0 bits (206), Expect(3) = 1e-17
Identities = 44/92 (47%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Frame = +1
Query: 1144 QQISGNSNMMRKMMDIPTTQNLLNDSHIVRNVMMNNMRIGEAIGRNLEFAYIINNPDALR 1323
QQ++ N N+MR++M+ P QNL+N+ I+RN++MNN ++ E I RN E A+I+N+P LR
Sbjct: 161 QQLTRNPNIMREIMNTPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLR 220
Query: 1324 *RMEVIRTLEQLREMMR--DIIMSNIQCFLEG 1413
+E R E +REMMR D MSNI+ EG
Sbjct: 221 QTLEAARNPELMREMMRNTDRAMSNIESSPEG 252
Score = 28.5 bits (62), Expect(3) = 1e-17
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 1413 GSNMLMQMYENVHKPLLNA 1469
G NML +MYE V +P LNA
Sbjct: 252 GFNMLRRMYETVQEPFLNA 270
Score = 25.0 bits (53), Expect(3) = 1e-17
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 1496 PFSAQSGNQTGGEDEDRLVTFFTMPTYAHSESS 1594
PF+A GNQ G + D T P+ A SES+
Sbjct: 284 PFAALLGNQAGNQASDAT----TNPSIASSEST 312
>ref|NP_565407.1| ubiquilin [Arabidopsis thaliana] gi|13430494|gb|AAK25869.1|AF360159_1
putative ubiquitin protein [Arabidopsis thaliana]
gi|14596081|gb|AAK68768.1| putative ubiquitin-like
protein [Arabidopsis thaliana] gi|20148243|gb|AAM10012.1|
putative ubiquitin-like protein [Arabidopsis thaliana]
gi|20198103|gb|AAD25137.2| putative ubiquitin-like
protein [Arabidopsis thaliana] gi|21280931|gb|AAM44934.1|
putative ubiquitin protein [Arabidopsis thaliana]
gi|110735106|gb|ABG89123.1| Dsk2b [synthetic construct]
gi|110737155|dbj|BAF00527.1| ubiquitin-like protein
[Arabidopsis thaliana] gi|330251502|gb|AEC06596.1|
ubiquilin [Arabidopsis thaliana]
Length = 538
Score = 81.3 bits (199), Expect(3) = 6e-17
Identities = 52/144 (36%), Positives = 78/144 (54%), Gaps = 8/144 (5%)
Frame = +1
Query: 1006 QAATAHPFGGNNTSDI*Q-EWLCPNQGF----GGEA-SSXXXXXXXXXXXXDQQISGNSN 1167
Q G N++S++ E L P GF GG A + QQ++ N N
Sbjct: 105 QTTAPQAVGSNDSSNLGGGESLFPGLGFNPLGGGNAMAGLFGSGLPDLEQAQQQLAQNPN 164
Query: 1168 MMRKMMDIPTTQNLLNDSHIVRNVMMNNMRIGEAIGRNLEFAYIINNPDALR*RMEVIRT 1347
M+R+MM+ P QNL+N+ +R+++MNN ++ E + RN E +++N+P LR +E R
Sbjct: 165 MIREMMNTPAIQNLMNNPEFMRSMIMNNPQMRELVDRNPELGHVLNDPSILRQTLEAARN 224
Query: 1348 LEQLREMMR--DIIMSNIQCFLEG 1413
E +REMMR D MSNI+ EG
Sbjct: 225 PELMREMMRNTDRAMSNIESMPEG 248
Score = 32.0 bits (71), Expect(3) = 6e-17
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Frame = +3
Query: 1413 GSNMLMQMYENVHKPLLNAL--------NRNFRVFIHFQLNQGIKLVG 1532
G NML +MYENV +PL+NA N + F NQG+ G
Sbjct: 248 GFNMLRRMYENVQEPLMNATTMSENAGNNTSSNPFAALLGNQGVTTQG 295
Score = 21.9 bits (45), Expect(3) = 6e-17
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +3
Query: 939 GVKDGHVIHLACRFVPATSFASAS 1010
G++ H +H+ FVP++ A A+
Sbjct: 77 GLQADHTVHMVRGFVPSSPSAPAA 100
>ref|XP_002306425.1| predicted protein [Populus trichocarpa] gi|222855874|gb|EEE93421.1|
predicted protein [Populus trichocarpa]
Length = 549
Score = 83.6 bits (205), Expect(3) = 3e-16
Identities = 44/92 (47%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
Frame = +1
Query: 1144 QQISGNSNMMRKMMDIPTTQNLLNDSHIVRNVMMNNMRIGEAIGRNLEFAYIINNPDALR 1323
QQ++ N N+MR +M+ P QNL+N+ I+RN++MNN ++ E I RN E A+I+N+P LR
Sbjct: 165 QQLTQNPNIMRDIMNTPVVQNLMNNPEIMRNLLMNNPQMREIIDRNPELAHILNDPSTLR 224
Query: 1324 *RMEVIRTLEQLREMMR--DIIMSNIQCFLEG 1413
+E R E +REMMR D MSNI+ EG
Sbjct: 225 QTLEAARNPELMREMMRNTDRAMSNIESSPEG 256
Score = 28.5 bits (62), Expect(3) = 3e-16
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 1413 GSNMLMQMYENVHKPLLNA 1469
G NML +MYE V +P LNA
Sbjct: 256 GFNMLRRMYETVQEPFLNA 274
Score = 20.8 bits (42), Expect(3) = 3e-16
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 1496 PFSAQSGNQTGGEDED 1543
PF+A G QTG + D
Sbjct: 288 PFAALLGTQTGNQARD 303
>ref|NP_001150353.1| LOC100283983 [Zea mays] gi|195638608|gb|ACG38772.1| ubiquilin-1 [Zea
mays] gi|195644430|gb|ACG41683.1| ubiquilin-1 [Zea mays]
gi|224029247|gb|ACN33699.1| unknown [Zea mays]
gi|413956941|gb|AFW89590.1| Ubiquilin-1 [Zea mays]
Length = 533
Score = 82.8 bits (203), Expect(2) = 4e-16
Identities = 40/92 (43%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Frame = +1
Query: 1144 QQISGNSNMMRKMMDIPTTQNLLNDSHIVRNVMMNNMRIGEAIGRNLEFAYIINNPDALR 1323
QQ++ N N+MR+MM++P QNL+N+ ++R+++MNN ++ E I RN + A+++N+P +R
Sbjct: 149 QQLAENPNLMREMMNMPLMQNLMNNPELIRSIIMNNPQMRELIDRNPDLAHVLNDPSIMR 208
Query: 1324 *RMEVIRTLEQLREMMR--DIIMSNIQCFLEG 1413
E +R E +REMMR D MSNI+ EG
Sbjct: 209 QTFEAVRNPELMREMMRNTDRAMSNIESSPEG 240
Score = 29.6 bits (65), Expect(2) = 4e-16
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
Frame = +3
Query: 1413 GSNMLMQMYENVHKPLLNAL------NRNFRVFIHFQLNQG 1517
G NML +MYE V +P LNA +RN F NQG
Sbjct: 240 GFNMLRRMYETVQEPFLNATTMGSEGDRNSNPFSALLGNQG 280
>ref|XP_001759037.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689736|gb|EDQ76106.1| predicted protein
[Physcomitrella patens subsp. patens]
Length = 531
Score = 79.7 bits (195), Expect(2) = 4e-16
Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Frame = +1
Query: 1081 GFGGEASSXXXXXXXXXXXXDQQISGNSNMMRKMMDIPTTQNLLNDSHIVRNVMMNNMRI 1260
G GG A QQ+ N N+MR+MM++P QNL+N+ ++R+++M+N ++
Sbjct: 133 GSGGGAFPPFGTGASDFQQVQQQLMQNPNLMREMMNMPVVQNLMNNPDLMRSLIMSNPQM 192
Query: 1261 GEAIGRNLEFAYIINNPDALR*RMEVIRTLEQLREMMR--DIIMSNIQCFLEG 1413
E I RN + A+I+N+P LR ++ R E +REMMR D MSNI+ EG
Sbjct: 193 REIIDRNPDLAHILNDPGTLRQTLDAARNPELMREMMRNTDRAMSNIEASPEG 245
Score = 32.7 bits (73), Expect(2) = 4e-16
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +3
Query: 1413 GSNMLMQMYENVHKPLLNALNRNFRVFIHFQLNQGIKLVG 1532
G NML +MYENV +PLLNA + V N LVG
Sbjct: 245 GFNMLRRMYENVQEPLLNAATMSGEVGNGVAPNPFAALVG 284