BLASTX nr result

ID: Cnidium21_contig00008241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008241
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_565860.1| tetratricopeptide repeat domain-containing prot...    80   1e-21
ref|XP_002277967.1| PREDICTED: uncharacterized protein LOC100267...    79   3e-21
emb|CBI32668.3| unnamed protein product [Vitis vinifera]               79   3e-21
gb|AAM66986.1| unknown [Arabidopsis thaliana]                          80   4e-21
ref|XP_002881505.1| hypothetical protein ARALYDRAFT_482732 [Arab...    78   3e-20

>ref|NP_565860.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana] gi|4056493|gb|AAC98059.1| chloroplast lumen
           common protein family [Arabidopsis thaliana]
           gi|114050659|gb|ABI49479.1| At2g37400 [Arabidopsis
           thaliana] gi|330254299|gb|AEC09393.1| tetratricopeptide
           repeat domain-containing protein [Arabidopsis thaliana]
          Length = 333

 Score = 79.7 bits (195), Expect(2) = 1e-21
 Identities = 40/79 (50%), Positives = 57/79 (72%)
 Frame = -1

Query: 431 EDKEKNLEMFLNDHPADVEALKNLMEIKIKNKKVQEATAIIDKLIAXXXXXXXXXXXKSH 252
           E++E++LE +L  HP DVEAL++LME++IK++K+ EA  +ID+LI            K++
Sbjct: 113 EEEERSLEEYLASHPDDVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWPMLKAN 172

Query: 251 IFCYSGDVESAKKGFNEIL 195
           IF YSGD+ESAK GF EIL
Sbjct: 173 IFSYSGDLESAKTGFEEIL 191



 Score = 48.9 bits (115), Expect(2) = 1e-21
 Identities = 27/38 (71%), Positives = 29/38 (76%)
 Frame = -2

Query: 115 EILDKDPLRVEAYHGLVMAASQDESSPELEEVEKRIRE 2
           EIL KDPLRVEAYHGLVMA S  +S  +L  VEKRI E
Sbjct: 189 EILVKDPLRVEAYHGLVMAYS--DSGDDLNAVEKRIEE 224


>ref|XP_002277967.1| PREDICTED: uncharacterized protein LOC100267054 [Vitis vinifera]
          Length = 351

 Score = 79.0 bits (193), Expect(2) = 3e-21
 Identities = 38/79 (48%), Positives = 54/79 (68%)
 Frame = -1

Query: 431 EDKEKNLEMFLNDHPADVEALKNLMEIKIKNKKVQEATAIIDKLIAXXXXXXXXXXXKSH 252
           E+KE+ +E ++  HP DVE LK+LME+KIKN+K+QEA  +I++LI            K+H
Sbjct: 126 EEKERTVEEYVESHPDDVEGLKSLMEVKIKNRKLQEAVDVIERLIQLEPDDKEWPLLKAH 185

Query: 251 IFCYSGDVESAKKGFNEIL 195
           ++ YSG+ E AK GF EIL
Sbjct: 186 LYSYSGESELAKLGFEEIL 204



 Score = 48.5 bits (114), Expect(2) = 3e-21
 Identities = 24/36 (66%), Positives = 27/36 (75%)
 Frame = -2

Query: 115 EILDKDPLRVEAYHGLVMAASQDESSPELEEVEKRI 8
           EIL  +PL VEAYHGLVMA SQ +S  EL +V KRI
Sbjct: 202 EILSANPLTVEAYHGLVMAVSQSDSGDELNQVLKRI 237


>emb|CBI32668.3| unnamed protein product [Vitis vinifera]
          Length = 314

 Score = 79.0 bits (193), Expect(2) = 3e-21
 Identities = 38/79 (48%), Positives = 54/79 (68%)
 Frame = -1

Query: 431 EDKEKNLEMFLNDHPADVEALKNLMEIKIKNKKVQEATAIIDKLIAXXXXXXXXXXXKSH 252
           E+KE+ +E ++  HP DVE LK+LME+KIKN+K+QEA  +I++LI            K+H
Sbjct: 95  EEKERTVEEYVESHPDDVEGLKSLMEVKIKNRKLQEAVDVIERLIQLEPDDKEWPLLKAH 154

Query: 251 IFCYSGDVESAKKGFNEIL 195
           ++ YSG+ E AK GF EIL
Sbjct: 155 LYSYSGESELAKLGFEEIL 173



 Score = 48.5 bits (114), Expect(2) = 3e-21
 Identities = 24/36 (66%), Positives = 27/36 (75%)
 Frame = -2

Query: 115 EILDKDPLRVEAYHGLVMAASQDESSPELEEVEKRI 8
           EIL  +PL VEAYHGLVMA SQ +S  EL +V KRI
Sbjct: 171 EILSANPLTVEAYHGLVMAVSQSDSGDELNQVLKRI 206


>gb|AAM66986.1| unknown [Arabidopsis thaliana]
          Length = 333

 Score = 79.7 bits (195), Expect(2) = 4e-21
 Identities = 40/79 (50%), Positives = 57/79 (72%)
 Frame = -1

Query: 431 EDKEKNLEMFLNDHPADVEALKNLMEIKIKNKKVQEATAIIDKLIAXXXXXXXXXXXKSH 252
           E++E++LE +L  HP DVEAL++LME++IK++K+ EA  +ID+LI            K++
Sbjct: 113 EEEERSLEEYLASHPDDVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWPMLKAN 172

Query: 251 IFCYSGDVESAKKGFNEIL 195
           IF YSGD+ESAK GF EIL
Sbjct: 173 IFSYSGDLESAKTGFEEIL 191



 Score = 47.4 bits (111), Expect(2) = 4e-21
 Identities = 26/38 (68%), Positives = 29/38 (76%)
 Frame = -2

Query: 115 EILDKDPLRVEAYHGLVMAASQDESSPELEEVEKRIRE 2
           EIL KDPLRVEAYHGLVMA S  +S  +L  VE+RI E
Sbjct: 189 EILVKDPLRVEAYHGLVMAYS--DSGDDLNAVEQRIEE 224


>ref|XP_002881505.1| hypothetical protein ARALYDRAFT_482732 [Arabidopsis lyrata subsp.
           lyrata] gi|297327344|gb|EFH57764.1| hypothetical protein
           ARALYDRAFT_482732 [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score = 77.8 bits (190), Expect(2) = 3e-20
 Identities = 40/79 (50%), Positives = 56/79 (70%)
 Frame = -1

Query: 431 EDKEKNLEMFLNDHPADVEALKNLMEIKIKNKKVQEATAIIDKLIAXXXXXXXXXXXKSH 252
           E++E++LE  L  HP DVEAL++LME++IK++K+ EA  +ID+LI            K++
Sbjct: 114 EEEERSLEDHLASHPEDVEALRSLMEVRIKSRKLIEAIELIDRLIELEPEEKEWPILKAN 173

Query: 251 IFCYSGDVESAKKGFNEIL 195
           IF YSGD+ESAK GF EIL
Sbjct: 174 IFSYSGDLESAKTGFEEIL 192



 Score = 46.2 bits (108), Expect(2) = 3e-20
 Identities = 25/38 (65%), Positives = 29/38 (76%)
 Frame = -2

Query: 115 EILDKDPLRVEAYHGLVMAASQDESSPELEEVEKRIRE 2
           EIL KDPLRV+AYHGLVMA S  +S  +L  VE+RI E
Sbjct: 190 EILVKDPLRVDAYHGLVMAYS--DSGADLNAVEERIEE 225


Top