BLASTX nr result

ID: Cnidium21_contig00008179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008179
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3...   321   6e-86
ref|XP_002532346.1| gamma-tubulin complex component, putative [R...   312   3e-83
ref|XP_002309295.1| tubulin gamma complex-associated protein [Po...   308   4e-82
ref|XP_004144694.1| PREDICTED: gamma-tubulin complex component 3...   307   1e-81
ref|XP_003625292.1| Gamma-tubulin complex component [Medicago tr...   306   2e-81

>ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3 homolog [Vitis
           vinifera]
          Length = 854

 Score =  321 bits (823), Expect = 6e-86
 Identities = 160/202 (79%), Positives = 169/202 (83%)
 Frame = +2

Query: 2   AMAGAIHMHAQHGDPIVHNFMKRLLRRVCSPLFEMVRSWVLEGELEDIFMEFFVLGQPVK 181
           AMAGAIH+HAQHGDP+VH FM++LL RVCSPLFEMVRSWVLEGELEDIF EFFVLGQPVK
Sbjct: 343 AMAGAIHLHAQHGDPLVHEFMRQLLCRVCSPLFEMVRSWVLEGELEDIFAEFFVLGQPVK 402

Query: 182 AESLWREGYQLRAAMLPSFISQSLAHRILRTGKSINFLRVCCEDRSWXXXXXXXXXXXXX 361
           AESLWREGY+L A MLPSFISQSLA RILRTGKSINFLRVCCEDR W             
Sbjct: 403 AESLWREGYRLHAGMLPSFISQSLAQRILRTGKSINFLRVCCEDRGWADAATEAAAAAGT 462

Query: 362 XXXXXXXXXXXXDALESLVTEAARRIDKHLMDVVYRQYKFKEHCLAIKRYLLLGQGDFVQ 541
                       DALESLV EAA+RIDKHL+DV+Y+QYKFKEHCLAIKRYLLLGQGDFVQ
Sbjct: 463 TTRRGGLGYGETDALESLVIEAAKRIDKHLLDVMYKQYKFKEHCLAIKRYLLLGQGDFVQ 522

Query: 542 YLMDIVGPELSEPANTISSFKL 607
           YLMDIVGPELSEPANTISSFKL
Sbjct: 523 YLMDIVGPELSEPANTISSFKL 544


>ref|XP_002532346.1| gamma-tubulin complex component, putative [Ricinus communis]
           gi|223527963|gb|EEF30048.1| gamma-tubulin complex
           component, putative [Ricinus communis]
          Length = 855

 Score =  312 bits (799), Expect = 3e-83
 Identities = 153/202 (75%), Positives = 166/202 (82%)
 Frame = +2

Query: 2   AMAGAIHMHAQHGDPIVHNFMKRLLRRVCSPLFEMVRSWVLEGELEDIFMEFFVLGQPVK 181
           AMAGAIH+HAQHGDP+VH FM+ LL+RVCSPLFEMVRSWVLEGELED+F EFFV+GQPVK
Sbjct: 344 AMAGAIHLHAQHGDPLVHEFMRNLLQRVCSPLFEMVRSWVLEGELEDLFAEFFVVGQPVK 403

Query: 182 AESLWREGYQLRAAMLPSFISQSLAHRILRTGKSINFLRVCCEDRSWXXXXXXXXXXXXX 361
           AESLWREGY+L A MLPSFIS SLA RILRTGKSINFLRVCC+DR W             
Sbjct: 404 AESLWREGYRLHAGMLPSFISPSLAQRILRTGKSINFLRVCCDDRGWADTATEAATAAGT 463

Query: 362 XXXXXXXXXXXXDALESLVTEAARRIDKHLMDVVYRQYKFKEHCLAIKRYLLLGQGDFVQ 541
                       DALE+LV EAA+R DKHL+DV+Y+ YKFKEHCLAIKRYLLLGQGDFVQ
Sbjct: 464 TTRRGSLGYGETDALETLVVEAAKRTDKHLLDVMYKTYKFKEHCLAIKRYLLLGQGDFVQ 523

Query: 542 YLMDIVGPELSEPANTISSFKL 607
           YLMDIVGPELSEPANTISSFKL
Sbjct: 524 YLMDIVGPELSEPANTISSFKL 545


>ref|XP_002309295.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222855271|gb|EEE92818.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 860

 Score =  308 bits (790), Expect = 4e-82
 Identities = 152/202 (75%), Positives = 165/202 (81%)
 Frame = +2

Query: 2   AMAGAIHMHAQHGDPIVHNFMKRLLRRVCSPLFEMVRSWVLEGELEDIFMEFFVLGQPVK 181
           AMAGAIH+HAQHGDP+VH FM+ LL+ VCSPLFEMVRSWVLEGELEDIF EFFV+GQPVK
Sbjct: 349 AMAGAIHLHAQHGDPLVHEFMRSLLQHVCSPLFEMVRSWVLEGELEDIFAEFFVVGQPVK 408

Query: 182 AESLWREGYQLRAAMLPSFISQSLAHRILRTGKSINFLRVCCEDRSWXXXXXXXXXXXXX 361
           AESLWREGY+L A MLPSFISQ LA RILRTGKSINFLRVCC+DR W             
Sbjct: 409 AESLWREGYRLHAGMLPSFISQPLAQRILRTGKSINFLRVCCDDRGWADTATEAAAAAGT 468

Query: 362 XXXXXXXXXXXXDALESLVTEAARRIDKHLMDVVYRQYKFKEHCLAIKRYLLLGQGDFVQ 541
                       DALE+LV EAA+RIDKHL+DV+Y +YKFKEHCLAIKRYLLLGQGDFVQ
Sbjct: 469 TTRRGSLGYGETDALETLVVEAAKRIDKHLLDVIYTRYKFKEHCLAIKRYLLLGQGDFVQ 528

Query: 542 YLMDIVGPELSEPANTISSFKL 607
           YLMDIVG ELSEPANTISSF+L
Sbjct: 529 YLMDIVGQELSEPANTISSFQL 550


>ref|XP_004144694.1| PREDICTED: gamma-tubulin complex component 3-like [Cucumis sativus]
          Length = 846

 Score =  307 bits (786), Expect = 1e-81
 Identities = 153/201 (76%), Positives = 165/201 (82%)
 Frame = +2

Query: 5   MAGAIHMHAQHGDPIVHNFMKRLLRRVCSPLFEMVRSWVLEGELEDIFMEFFVLGQPVKA 184
           MAGAIH+HAQHGDP+V  FM+RLLRRVCSPLFEMVRSWVLEGELEDIF EFFV+GQ VKA
Sbjct: 337 MAGAIHLHAQHGDPLVLEFMRRLLRRVCSPLFEMVRSWVLEGELEDIFSEFFVVGQQVKA 396

Query: 185 ESLWREGYQLRAAMLPSFISQSLAHRILRTGKSINFLRVCCEDRSWXXXXXXXXXXXXXX 364
           ESLWREGY+L A MLPSFISQSLA RILRTGKSINFLRVCCED  W              
Sbjct: 397 ESLWREGYRLHAGMLPSFISQSLAQRILRTGKSINFLRVCCEDMGWADAATEAAAAAGTT 456

Query: 365 XXXXXXXXXXXDALESLVTEAARRIDKHLMDVVYRQYKFKEHCLAIKRYLLLGQGDFVQY 544
                      DALESLV EAA+RIDKHL+DV++++YKFK+HCLAIKRYLLLGQGDFVQY
Sbjct: 457 TKRGGLGYGETDALESLVDEAAKRIDKHLLDVMHKRYKFKDHCLAIKRYLLLGQGDFVQY 516

Query: 545 LMDIVGPELSEPANTISSFKL 607
           LMDIVGPELSEPAN ISSFKL
Sbjct: 517 LMDIVGPELSEPANAISSFKL 537


>ref|XP_003625292.1| Gamma-tubulin complex component [Medicago truncatula]
           gi|355500307|gb|AES81510.1| Gamma-tubulin complex
           component [Medicago truncatula]
          Length = 841

 Score =  306 bits (784), Expect = 2e-81
 Identities = 153/202 (75%), Positives = 166/202 (82%)
 Frame = +2

Query: 2   AMAGAIHMHAQHGDPIVHNFMKRLLRRVCSPLFEMVRSWVLEGELEDIFMEFFVLGQPVK 181
           AMAGAIH+HA+HGDP+VH FMKRLLRRVCSPLFEMV+ WVLEGELEDIF+EFF++GQPVK
Sbjct: 335 AMAGAIHLHARHGDPMVHEFMKRLLRRVCSPLFEMVKRWVLEGELEDIFVEFFIVGQPVK 394

Query: 182 AESLWREGYQLRAAMLPSFISQSLAHRILRTGKSINFLRVCCEDRSWXXXXXXXXXXXXX 361
           AESLWREGY+L  AMLPSFIS SLA RILRTGKSINFLRVCCEDR W             
Sbjct: 395 AESLWREGYRLYDAMLPSFISASLAQRILRTGKSINFLRVCCEDRGW---ARAATEDTGA 451

Query: 362 XXXXXXXXXXXXDALESLVTEAARRIDKHLMDVVYRQYKFKEHCLAIKRYLLLGQGDFVQ 541
                       D LESLV EA++RIDKHL+DV+Y +YKFKEHCLAIKRYLLLGQGDFVQ
Sbjct: 452 MARRGGFGYGETDTLESLVDEASKRIDKHLLDVIYERYKFKEHCLAIKRYLLLGQGDFVQ 511

Query: 542 YLMDIVGPELSEPANTISSFKL 607
           YLMDIVGPELS PANTISSFKL
Sbjct: 512 YLMDIVGPELSVPANTISSFKL 533


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