BLASTX nr result

ID: Cnidium21_contig00008140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008140
         (1279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31917.3| unnamed protein product [Vitis vinifera]              246   e-111
ref|XP_003608723.1| DEAD-box ATP-dependent RNA helicase [Medicag...   206   4e-99
ref|XP_001781419.1| predicted protein [Physcomitrella patens sub...   129   6e-58
ref|XP_002304418.1| predicted protein [Populus trichocarpa] gi|2...   206   5e-54
ref|XP_004152431.1| PREDICTED: uncharacterized protein LOC101212...   215   2e-53

>emb|CBI31917.3| unnamed protein product [Vitis vinifera]
          Length = 448

 Score =  246 bits (628), Expect(2) = e-111
 Identities = 133/277 (48%), Positives = 167/277 (60%), Gaps = 1/277 (0%)
 Frame = -1

Query: 1228 MGTRSNFYKNPSYTYNKDXXXXXXXXXXXXXXXATGNLPPPTTHEPSQFSGENIVTGXXX 1049
            MGTR+NFYKNPS++YN+D               ATG+  P     P+     N       
Sbjct: 1    MGTRTNFYKNPSFSYNRDFSLSSVLQNLKAYNIATGSASPTDESPPANEKKVN-----RK 55

Query: 1048 XXXXXXXXPAQNTHLQHYDDQPMSHQDYIEKRRREVKSCQVLAELPASLLETSNSGVPLV 869
                    P QN  L+  D  PMSHQD+I+KRR+EV S QV  EL   +L TSNSG+ LV
Sbjct: 56   RRPDRRSPPCQNPELKETDG-PMSHQDFIKKRRKEVSSGQVYQELTPDILGTSNSGLHLV 114

Query: 868  EYDSDGTTSPEHEENEDRDASSLVNNPCEEKQNHPDSADRVKNRSEQRLPVPGEPACILC 689
            EY+SD +TS E    +D        NP      H +  ++VK+R EQR P+PGEP C++C
Sbjct: 115  EYESDKSTSSESGAEQDPP------NP-----GHINEVEQVKSRREQRFPLPGEPVCVVC 163

Query: 688  GKYGEYICNETNDDICSIDCKSELLEKIR-REKALSKNLIAEKISSGPNCPIQPYVFGGD 512
            G YGEYICNET+DD+CS+DCK+ELL+ +R  E++LS        SSG  C +     G D
Sbjct: 164  GLYGEYICNETDDDVCSMDCKAELLKNLRLSEESLSNEGCPTVSSSGLKCALPVPELGED 223

Query: 511  TWDPNNHRWSAKKSSLCTYRCWKCQRPGHLADDCLAL 401
            TWD  +HRWS K+SSLCTY CWKCQRPGHLADDCL +
Sbjct: 224  TWDYVHHRWSKKRSSLCTYECWKCQRPGHLADDCLVM 260



 Score =  182 bits (461), Expect(2) = e-111
 Identities = 83/134 (61%), Positives = 99/134 (73%), Gaps = 1/134 (0%)
 Frame = -2

Query: 399 TSISQPASSGETCSQVTL-LKKSGFIPRDLSELYKRCHQFSRYADAARCNSCNNSSDLAT 223
           TS SQ     +TC++V +   KS FI RDL  LYKRCHQ  +    A+CN C +SS LAT
Sbjct: 261 TSNSQSPCLSQTCNKVPMGQNKSTFISRDLLGLYKRCHQIGKNLTTAKCNLCCSSSTLAT 320

Query: 222 CLECNITCCDSVGHLSEHIKMHPSHKQYYSYKLKHLVKCCKSNCKVTDIKDLLACHYCFN 43
           CL+C+   CD+ GHL EHI  HPSH++ +SYKLK LVKCCKS C+VTD+KDLL CHYC +
Sbjct: 321 CLDCSTVICDNAGHLKEHIIAHPSHQKIFSYKLKRLVKCCKSTCEVTDLKDLLVCHYCLD 380

Query: 42  KAFDKFYDMYTATW 1
           KAFDKFYDMYTATW
Sbjct: 381 KAFDKFYDMYTATW 394


>ref|XP_003608723.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355509778|gb|AES90920.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 452

 Score =  206 bits (523), Expect(2) = 4e-99
 Identities = 122/291 (41%), Positives = 156/291 (53%), Gaps = 17/291 (5%)
 Frame = -1

Query: 1228 MGTRSNFYKNPSYTYNKDXXXXXXXXXXXXXXXATGNL-----PPPTTHEPSQFSGENIV 1064
            M  R+NFYKNPS +YN++               ATGN+     PPP     +        
Sbjct: 1    MSNRTNFYKNPSISYNRNLSLSSVLQNLHAYNIATGNITSDDQPPPAPAPTASLKRRR-- 58

Query: 1063 TGXXXXXXXXXXXPAQNTHLQHYDDQP--MSHQDYIEKRRREVKSCQVL--AELPASLLE 896
                            N H    DD P  MSH DYI KRR+EV S +     EL   +L 
Sbjct: 59   -------HPRPPQSRHNHHKNDVDDDPSSMSHTDYILKRRKEVDSAKNCDRVELTEDVLG 111

Query: 895  TSNSGVPLVEYDSDGTTSPEHEENEDRDASSLVNNPCEEKQNHPDSADRVKNRSEQRLPV 716
             SNS + LV+Y SD + S E EE       +L N+  +E     +S + VK+R+EQR PV
Sbjct: 112  KSNSALSLVDYASDESDSSECEETR-----TLPNSGHKE-----ESINGVKSRNEQRFPV 161

Query: 715  PGEPACILCGKYGEYICNETNDDICSIDCKSELLEKIRREKALSKN--------LIAEKI 560
             GEP C++CG+YGEYICNET+DD+CS++CK+ELLE ++  +  S N           +  
Sbjct: 162  SGEPVCLICGRYGEYICNETDDDVCSMECKNELLEVLKLNEGTSHNQAEDFSHDQAKDFS 221

Query: 559  SSGPNCPIQPYVFGGDTWDPNNHRWSAKKSSLCTYRCWKCQRPGHLADDCL 407
            SSG    +   VF  DTWD N HRWS  +SSL TY CWKCQRPGHLA+DCL
Sbjct: 222  SSGIRDALPAPVFSDDTWDYNRHRWSKTRSSLSTYECWKCQRPGHLAEDCL 272



 Score =  183 bits (465), Expect(2) = 4e-99
 Identities = 78/125 (62%), Positives = 101/125 (80%), Gaps = 2/125 (1%)
 Frame = -2

Query: 369 ETCSQVTLLK--KSGFIPRDLSELYKRCHQFSRYADAARCNSCNNSSDLATCLECNITCC 196
           ++CS++T+ +  +S  IP+DL  LY+RCHQ  +   AA CN+C +S +LATC++C+I  C
Sbjct: 274 KSCSEITVGRSNRSSSIPKDLLGLYRRCHQLGKDLLAANCNTCRSSLNLATCIDCSIVLC 333

Query: 195 DSVGHLSEHIKMHPSHKQYYSYKLKHLVKCCKSNCKVTDIKDLLACHYCFNKAFDKFYDM 16
           D  GHL +HI+ HPSH++YYS+KLK LVKCCKS CKVTDIKDLL CHYCF+KAF+KFYDM
Sbjct: 334 DGAGHLDDHIRTHPSHQKYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFDKAFEKFYDM 393

Query: 15  YTATW 1
           YTATW
Sbjct: 394 YTATW 398


>ref|XP_001781419.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162667156|gb|EDQ53793.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 489

 Score =  129 bits (324), Expect(2) = 6e-58
 Identities = 54/105 (51%), Positives = 75/105 (71%)
 Frame = -2

Query: 315 LSELYKRCHQFSRYADAARCNSCNNSSDLATCLECNITCCDSVGHLSEHIKMHPSHKQYY 136
           L +LY+RC +    A A++C+ C  + +LA CL+C  T CDS GHLS H++ +PSH++ Y
Sbjct: 331 LQDLYRRCKEIEGQAKASKCDKCGINFNLAYCLDCGKTFCDSQGHLSSHMQENPSHRRMY 390

Query: 135 SYKLKHLVKCCKSNCKVTDIKDLLACHYCFNKAFDKFYDMYTATW 1
           S KL  LVKCCK  C V D+++LLAC+ C ++AFDK+Y MY ATW
Sbjct: 391 SRKLHRLVKCCKGPCPVVDMRELLACNSCLSEAFDKYYSMYNATW 435



 Score =  122 bits (307), Expect(2) = 6e-58
 Identities = 59/159 (37%), Positives = 94/159 (59%), Gaps = 3/159 (1%)
 Frame = -1

Query: 874 LVEYDSDGTTSPEHEENE-DRDASSLVNNPCEEKQNHPDSADRVKNRSEQRLPVPGEPAC 698
           L+ ++S G  S + E+ + D   SS VN      +    S   +  R +Q+   PGEP C
Sbjct: 145 LLGFNSIGDNSSDDEDTDTDVGVSSTVNGSSTVLEQQNCSDQIIAKRVDQKFAAPGEPEC 204

Query: 697 ILCGKYGEYICNETNDDICSIDCKSELLE--KIRREKALSKNLIAEKISSGPNCPIQPYV 524
           ++CG++G YIC+ET DD+CS++CK E+L+     R K  S++ ++ +  S P   +Q   
Sbjct: 205 VVCGRFGAYICDETEDDVCSLECKQEVLQLRTANRVKLTSESDVSFRAPSTPQGALQLPE 264

Query: 523 FGGDTWDPNNHRWSAKKSSLCTYRCWKCQRPGHLADDCL 407
              D WD   +R++ + +SL T+RCWKC+RPGHL +DC+
Sbjct: 265 EEPDKWDYKKNRYNYRHTSLSTFRCWKCKRPGHLPEDCV 303


>ref|XP_002304418.1| predicted protein [Populus trichocarpa] gi|222841850|gb|EEE79397.1|
            predicted protein [Populus trichocarpa]
          Length = 276

 Score =  206 bits (523), Expect(2) = 5e-54
 Identities = 110/275 (40%), Positives = 141/275 (51%), Gaps = 1/275 (0%)
 Frame = -1

Query: 1228 MGTRSNFYKNPSYTYNKDXXXXXXXXXXXXXXXATGNLPPPTTHEPSQFS-GENIVTGXX 1052
            MGTR+NFYK PS +Y KD               ATGN P  T  E  Q   G++ +    
Sbjct: 1    MGTRTNFYKTPSLSYKKDLNLSSALQNLKAYNIATGNAPLTTEEEDEQQPRGDSKIARPK 60

Query: 1051 XXXXXXXXXPAQNTHLQHYDDQPMSHQDYIEKRRREVKSCQVLAELPASLLETSNSGVPL 872
                       ++ H    +D+PMSH DYI                              
Sbjct: 61   RQRIQKNPQHNKHGHAIEENDEPMSHLDYIS----------------------------- 91

Query: 871  VEYDSDGTTSPEHEENEDRDASSLVNNPCEEKQNHPDSADRVKNRSEQRLPVPGEPACIL 692
                       +  E+E+++ SS          +HP+  DRVK+RSEQR PVPGEP C+L
Sbjct: 92   -----------DSSESEEKEGSSGSRQDDTLHSDHPNEVDRVKSRSEQRYPVPGEPVCLL 140

Query: 691  CGKYGEYICNETNDDICSIDCKSELLEKIRREKALSKNLIAEKISSGPNCPIQPYVFGGD 512
            CGKYGEYICNET+DDICS++CK+ELL+ ++  K  + N   +  SSG  C +   + G D
Sbjct: 141  CGKYGEYICNETDDDICSLECKAELLQSLKLAKGPASNQQLDVSSSGFKCALPMPLLGED 200

Query: 511  TWDPNNHRWSAKKSSLCTYRCWKCQRPGHLADDCL 407
            TWD N HRWS K S+LC Y CWKCQRPGHL +DCL
Sbjct: 201  TWDYNRHRWSKKISNLCAYECWKCQRPGHLPEDCL 235



 Score = 33.1 bits (74), Expect(2) = 5e-54
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = -2

Query: 342 KKSGFIPRDLSELYKRCHQFSRYADAARCN 253
           K S  I RDL  LY RCHQ  +    A CN
Sbjct: 247 KNSDSISRDLLGLYGRCHQIGKKLSGANCN 276


>ref|XP_004152431.1| PREDICTED: uncharacterized protein LOC101212105 [Cucumis sativus]
            gi|449513293|ref|XP_004164287.1| PREDICTED:
            uncharacterized protein LOC101227135 [Cucumis sativus]
          Length = 443

 Score =  215 bits (547), Expect = 2e-53
 Identities = 122/302 (40%), Positives = 162/302 (53%), Gaps = 7/302 (2%)
 Frame = -1

Query: 1228 MGTRSNFYKNPSYTYNKDXXXXXXXXXXXXXXXATGNLPPPTTHEPSQFSGENIVTGXXX 1049
            MG+R+NFYKNPS +Y KD               ATGN PP      S       V     
Sbjct: 1    MGSRTNFYKNPSISYKKDLHLSSALQNLRAYNIATGNAPPTDVQVQSP-----PVPVVKK 55

Query: 1048 XXXXXXXXPAQNTHLQHYD----DQPMSHQDYIEKRRREVKSCQVLAELPASLLETSNSG 881
                      +    Q YD    D PMSHQDYIE+RR+E    Q    L   +L  S+SG
Sbjct: 56   NENRKRQREPELCGTQMYDVGNSDGPMSHQDYIERRRKEANKSQPYETLTEDVLVASSSG 115

Query: 880  VPLVEYDSDGTTSPEHEENEDRDASSLVNNPCEEKQNHPDSADRVKNRSEQRLPVPGEPA 701
            + LV+Y+SD + S +  E  D   SSL+N+  E           V++++EQR  V GEP 
Sbjct: 116  LNLVDYESDESVSSDGAEKPDVQNSSLLNDYKE-----------VESKTEQRFAVAGEPV 164

Query: 700  CILCGKYGEYICNETNDDICSIDCKSELLEKIRREKALSKNLIAEKISSGPNCPIQPYVF 521
            C++CG+YGEYIC+ETNDDICS++CK +LLE ++R +      + +         +    F
Sbjct: 165  CVVCGRYGEYICDETNDDICSMECKFKLLEILKRGEEFPNCEVKDVALPESKYILPSPEF 224

Query: 520  GGDTWDPNNHRWSAKKSSLCTYRCWKCQRPGHLADDCL---ALNIYFSTSFFR*NMFPGD 350
            G DTWD  NHRWS KKS+LCTY CWKCQ+PGHLA+DCL   +  +  +      N  PGD
Sbjct: 225  GEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVRIAMQQMTSNPVPGD 284

Query: 349  IV 344
            ++
Sbjct: 285  LL 286



 Score =  167 bits (423), Expect = 5e-39
 Identities = 76/126 (60%), Positives = 91/126 (72%), Gaps = 3/126 (2%)
 Frame = -2

Query: 369 ETCSQVTLLKK---SGFIPRDLSELYKRCHQFSRYADAARCNSCNNSSDLATCLECNITC 199
           +T +QV +  +   S  +P DL  LYKRC+Q  +    A CN C+ S  LATCL+CN   
Sbjct: 264 KTSNQVRIAMQQMTSNPVPGDLLGLYKRCYQMGKNLSNALCNECSCSYSLATCLDCNTVY 323

Query: 198 CDSVGHLSEHIKMHPSHKQYYSYKLKHLVKCCKSNCKVTDIKDLLACHYCFNKAFDKFYD 19
           CDS GHL+EHI  HP+H  YYS+KLK LVKCCKS C+VT IKDLL CHYCF+KAFDKFYD
Sbjct: 324 CDSAGHLNEHIHTHPTHGLYYSHKLKRLVKCCKSTCRVTQIKDLLVCHYCFDKAFDKFYD 383

Query: 18  MYTATW 1
           MYTA+W
Sbjct: 384 MYTASW 389


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