BLASTX nr result

ID: Cnidium21_contig00008119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008119
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB02890.1| putative small nuclear ribonucleoprotein polypept...    94   1e-17
ref|XP_002308466.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
gb|ABK93558.1| unknown [Populus trichocarpa]                           93   3e-17
ref|XP_002530332.1| small nuclear ribonucleoprotein G, putative ...    92   3e-17
ref|XP_003625846.1| hypothetical protein MTR_7g104930 [Medicago ...    92   4e-17

>gb|ADB02890.1| putative small nuclear ribonucleoprotein polypeptide G/SNRNP-G
           [Jatropha curcas]
          Length = 80

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/50 (90%), Positives = 49/50 (98%)
 Frame = +1

Query: 1   TLRGFDQFMNLVIDNTVEVNGDERNDIGMVVIRGNSVVTVEALEPVSRGQ 150
           TLRGFDQFMNLV+DNTVEVNGDE+NDIGMVVIRGNSVVTVEALEPV++ Q
Sbjct: 31  TLRGFDQFMNLVVDNTVEVNGDEKNDIGMVVIRGNSVVTVEALEPVNKTQ 80


>ref|XP_002308466.1| predicted protein [Populus trichocarpa] gi|222854442|gb|EEE91989.1|
           predicted protein [Populus trichocarpa]
          Length = 80

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 45/50 (90%), Positives = 48/50 (96%)
 Frame = +1

Query: 1   TLRGFDQFMNLVIDNTVEVNGDERNDIGMVVIRGNSVVTVEALEPVSRGQ 150
           TLRGFDQFMNLV+DNTVEVNGDE+ DIGMVVIRGNSVVTVEALEPV+R Q
Sbjct: 31  TLRGFDQFMNLVVDNTVEVNGDEKTDIGMVVIRGNSVVTVEALEPVNRAQ 80


>gb|ABK93558.1| unknown [Populus trichocarpa]
          Length = 80

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/50 (88%), Positives = 48/50 (96%)
 Frame = +1

Query: 1   TLRGFDQFMNLVIDNTVEVNGDERNDIGMVVIRGNSVVTVEALEPVSRGQ 150
           TLRGFDQFMNLV+DNTVEVNGDE+ DIGMVV+RGNSVVTVEALEPV+R Q
Sbjct: 31  TLRGFDQFMNLVVDNTVEVNGDEKTDIGMVVLRGNSVVTVEALEPVNRAQ 80


>ref|XP_002530332.1| small nuclear ribonucleoprotein G, putative [Ricinus communis]
           gi|223530136|gb|EEF32048.1| small nuclear
           ribonucleoprotein G, putative [Ricinus communis]
          Length = 80

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/50 (90%), Positives = 48/50 (96%)
 Frame = +1

Query: 1   TLRGFDQFMNLVIDNTVEVNGDERNDIGMVVIRGNSVVTVEALEPVSRGQ 150
           TLRGFDQFMNLV+DNTVEVNGDE+ DIGMVVIRGNSVVTVEALEPV+R Q
Sbjct: 31  TLRGFDQFMNLVVDNTVEVNGDEKTDIGMVVIRGNSVVTVEALEPVNRMQ 80


>ref|XP_003625846.1| hypothetical protein MTR_7g104930 [Medicago truncatula]
           gi|87240819|gb|ABD32677.1| Like-Sm
           ribonucleoprotein-related, core [Medicago truncatula]
           gi|355500861|gb|AES82064.1| hypothetical protein
           MTR_7g104930 [Medicago truncatula]
          Length = 80

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 44/48 (91%), Positives = 48/48 (100%)
 Frame = +1

Query: 1   TLRGFDQFMNLVIDNTVEVNGDERNDIGMVVIRGNSVVTVEALEPVSR 144
           TLRGFDQFMNLV+DNTVEVNG+E+NDIGMVVIRGNSVVTVEALEPV+R
Sbjct: 31  TLRGFDQFMNLVVDNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPVNR 78


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