BLASTX nr result

ID: Cnidium21_contig00008088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008088
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264862.1| PREDICTED: uncharacterized protein LOC100241...    81   3e-13
emb|CAN83711.1| hypothetical protein VITISV_023673 [Vitis vinifera]    81   3e-13
ref|XP_002888446.1| hypothetical protein ARALYDRAFT_475676 [Arab...    77   7e-12
gb|AAM64543.1| unknown [Arabidopsis thaliana]                          77   7e-12
ref|NP_564863.1| uncharacterized protein [Arabidopsis thaliana] ...    76   9e-12

>ref|XP_002264862.1| PREDICTED: uncharacterized protein LOC100241008 [Vitis vinifera]
          Length = 186

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 54/149 (36%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
 Frame = -1

Query: 668 RPCKTILFISXXXXXXTSFPLIENPNFQNPSHVTLYFTNTHPINPNHFLSYKSNSFFTNR 489
           RPCKT+   S       +FP   NPN    + +   FT     NP   L++  ++     
Sbjct: 28  RPCKTLFISSYSVSFHPNFPDQNNPNSAGTAGILTIFTEIRQFNPRPPLTFV-DAVEDQH 86

Query: 488 RSLNPPQLQDN---PSSSIRDSTLDIMSIVGALLFGVGSGALTAAIMYLVWSMFSPRXXX 318
               PP+        S S+RD T D++S+V ALLFGVG GALTAA MYL WS+FS R   
Sbjct: 87  PIERPPRFGLGLGFDSDSLRDRTKDVLSVVVALLFGVGCGALTAATMYLGWSLFSNRHRY 146

Query: 317 XXXXXXXXXXXXXXXDIYSPKKMGYAAVP 231
                             SPKK+GY  +P
Sbjct: 147 SDFDYDDFEDDDVD---MSPKKVGYVRIP 172


>emb|CAN83711.1| hypothetical protein VITISV_023673 [Vitis vinifera]
          Length = 197

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 54/149 (36%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
 Frame = -1

Query: 668 RPCKTILFISXXXXXXTSFPLIENPNFQNPSHVTLYFTNTHPINPNHFLSYKSNSFFTNR 489
           RPCKT+   S       +FP   NPN    + +   FT     NP   L++  ++     
Sbjct: 28  RPCKTLFISSYSVSFHPNFPDQNNPNSAGTAGILTIFTEIRQFNPRPPLTFV-DAVEDQH 86

Query: 488 RSLNPPQLQDN---PSSSIRDSTLDIMSIVGALLFGVGSGALTAAIMYLVWSMFSPRXXX 318
               PP+        S S+RD T D++S+V ALLFGVG GALTAA MYL WS+FS R   
Sbjct: 87  PIERPPRFGLGLGFDSDSLRDRTKDVLSVVVALLFGVGCGALTAATMYLGWSLFSNRHRY 146

Query: 317 XXXXXXXXXXXXXXXDIYSPKKMGYAAVP 231
                             SPKK+GY  +P
Sbjct: 147 SDFDYDDFEDDDVD---MSPKKVGYVRIP 172


>ref|XP_002888446.1| hypothetical protein ARALYDRAFT_475676 [Arabidopsis lyrata subsp.
           lyrata] gi|297334287|gb|EFH64705.1| hypothetical protein
           ARALYDRAFT_475676 [Arabidopsis lyrata subsp. lyrata]
          Length = 179

 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 57/154 (37%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
 Frame = -1

Query: 668 RPCKTILFISXXXXXXTSFPLIENPNFQNPSHVTLYFTNTHPINPNHFLSYKSNSFFTNR 489
           RPCKT L  S         P +E+ +F +   VT++      +NP+H +      FF NR
Sbjct: 26  RPCKTFLISSYSLSITPENPNLES-DFTSTRFVTVF--TIRRLNPHHIVP-----FFVNR 77

Query: 488 RSLNPPQLQDNPS--------SSIRDSTLDIMSIVGALLFGVGSGALTAAIMYLVWSMFS 333
           R    PQ+Q + S        +S RD T DI+S+V ALLFGVG GALTAA MYLVW++  
Sbjct: 78  RH-EKPQIQSDRSLPLISENINSFRDRTRDILSVVVALLFGVGCGALTAATMYLVWALVV 136

Query: 332 PRXXXXXXXXXXXXXXXXXXDIYSPKKMGYAAVP 231
            R                     S KK+GY  +P
Sbjct: 137 NRQSFDFDEEDDYENDESDAA--SLKKLGYVKIP 168


>gb|AAM64543.1| unknown [Arabidopsis thaliana]
          Length = 180

 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 58/156 (37%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
 Frame = -1

Query: 668 RPCKTILFISXXXXXXTSFPLIENPNFQNPSHVTLYFT--NTHPINPNHFLSYKSNSFFT 495
           RPCKT L  S            ENPN ++    T + T      +NP+H +      FF 
Sbjct: 26  RPCKTFLISSYSLSITP-----ENPNLESDFTSTRFITVFTIRRLNPHHVVP-----FFV 75

Query: 494 NRRSLNP--------PQLQDNPSSSIRDSTLDIMSIVGALLFGVGSGALTAAIMYLVWSM 339
           NRR   P        P + DN  +S RD T DI+S+V ALLFGVG GALTAA MYLVW++
Sbjct: 76  NRRHEKPQIQSDRSLPLISDN-INSFRDRTRDILSVVVALLFGVGCGALTAATMYLVWAL 134

Query: 338 FSPRXXXXXXXXXXXXXXXXXXDIYSPKKMGYAAVP 231
              R                     S KK+GY  +P
Sbjct: 135 VVNRQSYDFEEEEDDYENDESDAA-SLKKLGYVKIP 169


>ref|NP_564863.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6686406|gb|AAF23840.1|AC007234_12 F1E22.9
           [Arabidopsis thaliana]
           gi|14190371|gb|AAK55666.1|AF378863_1 At1g65720/F1E22_13
           [Arabidopsis thaliana]
           gi|14190497|gb|AAK55729.1|AF380648_1 At1g65720/F1E22_13
           [Arabidopsis thaliana] gi|15215869|gb|AAK91478.1|
           At1g65720/F1E22_13 [Arabidopsis thaliana]
           gi|15809746|gb|AAL06801.1| At1g65720/F1E22_13
           [Arabidopsis thaliana] gi|332196296|gb|AEE34417.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 180

 Score = 76.3 bits (186), Expect = 9e-12
 Identities = 57/154 (37%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
 Frame = -1

Query: 668 RPCKTILFISXXXXXXTSFPLIENPNFQNPSHVTLYFTNTHPINPNHFLSYKSNSFFTNR 489
           RPCKT L  S         P +E+ +F +   VT++      +NP+H +      FF NR
Sbjct: 26  RPCKTFLISSYSLSITPENPNLES-DFTSTRFVTVF--TIRRLNPHHVVP-----FFVNR 77

Query: 488 RSLNP--------PQLQDNPSSSIRDSTLDIMSIVGALLFGVGSGALTAAIMYLVWSMFS 333
           R   P        P + DN  +S RD T DI+S+V ALLFGVG GALTAA MYLVW++  
Sbjct: 78  RHEKPQIQSDRSLPLISDN-INSFRDRTRDILSVVVALLFGVGCGALTAATMYLVWALVV 136

Query: 332 PRXXXXXXXXXXXXXXXXXXDIYSPKKMGYAAVP 231
            R                     S KK+GY  +P
Sbjct: 137 NRQSYDFEEEEDDYENDESDAA-SLKKLGYVKIP 169


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