BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008085
         (2941 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi...  1244   0.0  
ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]...  1218   0.0  
gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabido...  1217   0.0  
ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cu...  1214   0.0  
ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ri...  1214   0.0  

>ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera]
          Length = 771

 Score = 1244 bits (3220), Expect = 0.0
 Identities = 634/770 (82%), Positives = 664/770 (86%), Gaps = 15/770 (1%)
 Frame = +3

Query: 156  MGHGEKGRPSKRXXXXXXXXXXXXXXXXXXXXX-----DINQDGEN---KRDFTKLELKP 311
            MGHGEKGRPSKR                          D  +DGE    KRDFTKLELK 
Sbjct: 1    MGHGEKGRPSKRHKSSSKDEHKNPVVEDEDAYYGEEFEDDYRDGEKEGKKRDFTKLELKV 60

Query: 312  DHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 491
            DH+NRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV
Sbjct: 61   DHSNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 120

Query: 492  GLETETVISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKKLL 671
            GLETET+I+VL+KLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLK LL
Sbjct: 121  GLETETIIAVLSKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTLL 180

Query: 672  KDEVISRSRISSEG---NDGFTVSKSLGEIEGRHXXXXXXXXXXXXXXXXXXHSFEVDPA 842
            +DEVISRSRIS EG   NDGFT+SK++GEIEGRH                  HSFEVDPA
Sbjct: 181  RDEVISRSRISHEGSTGNDGFTISKTVGEIEGRHDELINEAELAAAAEEKETHSFEVDPA 240

Query: 843  QVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRA 1022
            QVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRA
Sbjct: 241  QVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRA 300

Query: 1023 RSGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFT 1202
            RSGIIVLPCGAGKSLVGVSAA RI+KSCLCLATNAVSVDQWAFQFKLWSTIRD+QICRFT
Sbjct: 301  RSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFT 360

Query: 1203 SDSKERFRGNAGVVVTTYNMVAFGGXXXXXXXXXXXXXXXXXWGLLLMDEVHVVPAHMFR 1382
            SDSKERFRGNAGVVVTTYNMVAFGG                 WGLLLMDEVHVVPAHMFR
Sbjct: 361  SDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFR 420

Query: 1383 KVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 1562
            KVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC
Sbjct: 421  KVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 480

Query: 1563 PMTKEFFAEYLRKENSKKKQALYVMNPNKFRACEFLIRFHEEQRRDKIIVFADNLFALIE 1742
            PMTKEFFAEYL+KENSKKKQALYVMNPNKFRACEFLIRFHE+QR DKIIVFADNLFAL E
Sbjct: 481  PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 540

Query: 1743 YAKKLKKPMIYGATSHVERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHA 1922
            YA KL+KPMIYGATSHVERTKILEAFKT +DVNT+FLSKVGDNSIDIPEANVIIQISSHA
Sbjct: 541  YAMKLRKPMIYGATSHVERTKILEAFKTHKDVNTIFLSKVGDNSIDIPEANVIIQISSHA 600

Query: 1923 GSRRQEAQRLGRILRAKGRLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 2102
            GSRRQEAQRLGRILRAKGRLQDR+AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG
Sbjct: 601  GSRRQEAQRLGRILRAKGRLQDRLAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 660

Query: 2103 YSFKVITGLPPPDAGPELSYYSLDDQNKLLTKVLTAGDDQVGLEILDEDTDDVALQKARR 2282
            YSFK+IT LPPPD+G +LSY+ LD+Q  LL KVL+AGDD VGLE LDED DD+ALQKARR
Sbjct: 661  YSFKIITSLPPPDSGADLSYHRLDEQLALLGKVLSAGDDAVGLEQLDEDADDIALQKARR 720

Query: 2283 XXXXXXXXXXANGKIYMEYNMGRNK----GHMRSKPKDPTKRHQLFKKRF 2420
                      A+G +YMEYN GRNK    G ++ KPKDP+KRH LFK+RF
Sbjct: 721  SVGSMSAMSGASGMVYMEYNTGRNKHGGQGQIKGKPKDPSKRHHLFKRRF 770


>ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]
            gi|57013137|sp|Q38861.3|XPB1_ARATH RecName: Full=DNA
            repair helicase XPB1; AltName: Full=ERCC3 homolog 1;
            AltName: Full=Protein araXPB; AltName: Full=RAD25 homolog
            1; Short=AtXPB1; AltName: Full=XPB homolog 1
            gi|11771735|gb|AAC49987.2| putative DNA repair protein
            and transcription factor [Arabidopsis thaliana]
            gi|14517424|gb|AAK62602.1| AT5g41370/MYC6_8 [Arabidopsis
            thaliana] gi|21360401|gb|AAM47316.1| AT5g41370/MYC6_8
            [Arabidopsis thaliana] gi|332007287|gb|AED94670.1| DNA
            repair helicase XPB1 [Arabidopsis thaliana]
          Length = 767

 Score = 1218 bits (3151), Expect = 0.0
 Identities = 619/767 (80%), Positives = 655/767 (85%), Gaps = 11/767 (1%)
 Frame = +3

Query: 156  MGHGEKGRPSKRXXXXXXXXXXXXXXXXXXXXXDI----NQDGEN---KRDFTKLELKPD 314
            MG+GE+GRP+K+                     D     ++DGE    KRDFTKLELKPD
Sbjct: 1    MGNGERGRPNKKMKYGGKDDQKMKNIQNAEDYYDDADEDSRDGEGEEKKRDFTKLELKPD 60

Query: 315  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 494
            H NRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG
Sbjct: 61   HGNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120

Query: 495  LETETVISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKKLLK 674
            LETET+ISVLNKLSKTKLPKEMI+FIHASTANYGKVKLVLKKNRYF+ESPFPEVLK+LL 
Sbjct: 121  LETETIISVLNKLSKTKLPKEMIEFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLS 180

Query: 675  DEVISRSRISSE---GNDGFTVSKSLGEIEGRHXXXXXXXXXXXXXXXXXXHSFEVDPAQ 845
            D+VI+R+R SSE   G DGF+V ++ GE+E                     HSFE+DPAQ
Sbjct: 181  DDVINRARFSSEPYYGGDGFSVGRTCGELEAGPGELLNEAEFAAAAEEKETHSFEIDPAQ 240

Query: 846  VENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 1025
            VENVKQRCLPNALNYPMLEEYDFRND VNPDLDMELKP AQPRPYQEKSLSKMFGNGRAR
Sbjct: 241  VENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRAR 300

Query: 1026 SGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 1205
            SGIIVLPCGAGKSLVGVSAA+RIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS
Sbjct: 301  SGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360

Query: 1206 DSKERFRGNAGVVVTTYNMVAFGGXXXXXXXXXXXXXXXXXWGLLLMDEVHVVPAHMFRK 1385
            DSKERFRGNAGVVVTTYNMVAFGG                 WGLLLMDEVHVVPAHMFRK
Sbjct: 361  DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEMRNREWGLLLMDEVHVVPAHMFRK 420

Query: 1386 VISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 1565
            VISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP
Sbjct: 421  VISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480

Query: 1566 MTKEFFAEYLRKENSKKKQALYVMNPNKFRACEFLIRFHEEQRRDKIIVFADNLFALIEY 1745
            MTKEFFAEYL+KENSKKKQALYVMNPNKFRACEFLIRFHE+QR DKIIVFADNLFAL EY
Sbjct: 481  MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540

Query: 1746 AKKLKKPMIYGATSHVERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 1925
            A KL+KPMIYGATSH+ERTKILEAFKTS+DVNTVFLSKVGDNSIDIPEANVIIQISSHAG
Sbjct: 541  AMKLRKPMIYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600

Query: 1926 SRRQEAQRLGRILRAKGRLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 2105
            SRRQEAQRLGRILRAKG+L+DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY
Sbjct: 601  SRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660

Query: 2106 SFKVITGLPPPDAGPELSYYSLDDQNKLLTKVLTAGDDQVGLEILDEDTDDVALQKARRX 2285
            SFKVIT LPPPDAG  LSY+S ++Q  LL KV+ AGDD VGLE L+EDTD +ALQKARR 
Sbjct: 661  SFKVITSLPPPDAGSSLSYHSQEEQLSLLGKVMNAGDDLVGLEQLEEDTDGMALQKARRS 720

Query: 2286 XXXXXXXXXANGKIYMEYNMGRNK-GHMRSKPKDPTKRHQLFKKRFV 2423
                     + G +YMEYN GR+K G    KPKDPTKRH LFKKR+V
Sbjct: 721  MGSMSVMSGSKGMVYMEYNSGRHKSGQQFKKPKDPTKRHNLFKKRYV 767


>gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabidopsis thaliana]
          Length = 767

 Score = 1217 bits (3150), Expect = 0.0
 Identities = 619/767 (80%), Positives = 655/767 (85%), Gaps = 11/767 (1%)
 Frame = +3

Query: 156  MGHGEKGRPSKRXXXXXXXXXXXXXXXXXXXXXDI----NQDGEN---KRDFTKLELKPD 314
            MG+GE+GRP+K+                     D     ++DGE    KRDFTKLELKPD
Sbjct: 1    MGNGERGRPNKKMKYGGKDDQKMKNIQNAEDYYDDADEDSRDGEGEEKKRDFTKLELKPD 60

Query: 315  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 494
            H NRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG
Sbjct: 61   HGNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120

Query: 495  LETETVISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKKLLK 674
            LETET+ISVLNKLSKTKLPKEMI+FIHASTANYGKVKLVLKKNRYF+ESPFPEVLK+LL 
Sbjct: 121  LETETIISVLNKLSKTKLPKEMIEFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLS 180

Query: 675  DEVISRSRISSE---GNDGFTVSKSLGEIEGRHXXXXXXXXXXXXXXXXXXHSFEVDPAQ 845
            D+VI+R+R SSE   G DGF+V ++ GE+E                     HSFE+DPAQ
Sbjct: 181  DDVINRARFSSEPYYGGDGFSVGRTSGELEAGPGELLNEAEFAAAAEEKETHSFEIDPAQ 240

Query: 846  VENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 1025
            VENVKQRCLPNALNYPMLEEYDFRND VNPDLDMELKP AQPRPYQEKSLSKMFGNGRAR
Sbjct: 241  VENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRAR 300

Query: 1026 SGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 1205
            SGIIVLPCGAGKSLVGVSAA+RIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS
Sbjct: 301  SGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360

Query: 1206 DSKERFRGNAGVVVTTYNMVAFGGXXXXXXXXXXXXXXXXXWGLLLMDEVHVVPAHMFRK 1385
            DSKERFRGNAGVVVTTYNMVAFGG                 WGLLLMDEVHVVPAHMFRK
Sbjct: 361  DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEMRNREWGLLLMDEVHVVPAHMFRK 420

Query: 1386 VISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 1565
            VISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP
Sbjct: 421  VISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480

Query: 1566 MTKEFFAEYLRKENSKKKQALYVMNPNKFRACEFLIRFHEEQRRDKIIVFADNLFALIEY 1745
            MTKEFFAEYL+KENSKKKQALYVMNPNKFRACEFLIRFHE+QR DKIIVFADNLFAL EY
Sbjct: 481  MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540

Query: 1746 AKKLKKPMIYGATSHVERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 1925
            A KL+KPMIYGATSH+ERTKILEAFKTS+DVNTVFLSKVGDNSIDIPEANVIIQISSHAG
Sbjct: 541  AMKLRKPMIYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600

Query: 1926 SRRQEAQRLGRILRAKGRLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 2105
            SRRQEAQRLGRILRAKG+L+DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY
Sbjct: 601  SRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660

Query: 2106 SFKVITGLPPPDAGPELSYYSLDDQNKLLTKVLTAGDDQVGLEILDEDTDDVALQKARRX 2285
            SFKVIT LPPPDAG  LSY+S ++Q  LL KV+ AGDD VGLE L+EDTD +ALQKARR 
Sbjct: 661  SFKVITSLPPPDAGSSLSYHSQEEQLSLLGKVMNAGDDLVGLEQLEEDTDGMALQKARRS 720

Query: 2286 XXXXXXXXXANGKIYMEYNMGRNK-GHMRSKPKDPTKRHQLFKKRFV 2423
                     + G +YMEYN GR+K G    KPKDPTKRH LFKKR+V
Sbjct: 721  MGSMSVMSGSKGMVYMEYNSGRHKSGQQFKKPKDPTKRHNLFKKRYV 767


>ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cucumis sativus]
          Length = 768

 Score = 1214 bits (3140), Expect = 0.0
 Identities = 616/767 (80%), Positives = 649/767 (84%), Gaps = 12/767 (1%)
 Frame = +3

Query: 156  MGHGEKGRPSKRXXXXXXXXXXXXXXXXXXXXXDINQDGEN-------KRDFTKLELKPD 314
            MGHG+KGRP+K+                     D   D +        KRDF+KLELKPD
Sbjct: 1    MGHGDKGRPNKKPKFGKEDYKKANFEDDDVYHLDDPDDDDRYGDKEGGKRDFSKLELKPD 60

Query: 315  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 494
            HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG
Sbjct: 61   HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120

Query: 495  LETETVISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKKLLK 674
            LETET+I+VL+KLSK KLPKEMIDFI+AST NYGKVKLVLKKNRY VESPFPEVL+KLLK
Sbjct: 121  LETETIIAVLSKLSKAKLPKEMIDFIYASTTNYGKVKLVLKKNRYLVESPFPEVLQKLLK 180

Query: 675  DEVISRSRISSE--GNDGFTVSKSLGEIEGRHXXXXXXXXXXXXXXXXXXHSFEVDPAQV 848
            DEVI R+R+  E  GN  FTVSK+ GE+  RH                  HSFE+DP+QV
Sbjct: 181  DEVIGRARVVHEDSGNGEFTVSKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQV 240

Query: 849  ENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARS 1028
            ENVKQRCLPNALNYPMLEEYDFRNDT+NPDLDMELKPQAQPRPYQEKSLSKMFGNGRARS
Sbjct: 241  ENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRARS 300

Query: 1029 GIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSD 1208
            GIIVLPCGAGKSLVGVSAASRI+KSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSD
Sbjct: 301  GIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSD 360

Query: 1209 SKERFRGNAGVVVTTYNMVAFGGXXXXXXXXXXXXXXXXXWGLLLMDEVHVVPAHMFRKV 1388
            SKERFRGNAGVVVTTYNMVAFGG                 WGLLLMDEVHVVPAHMFRKV
Sbjct: 361  SKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKV 420

Query: 1389 ISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPM 1568
            IS+TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPM
Sbjct: 421  ISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPM 480

Query: 1569 TKEFFAEYLRKENSKKKQALYVMNPNKFRACEFLIRFHEEQRRDKIIVFADNLFALIEYA 1748
            TKEFFAEYL+KENSKKKQALYVMNPNKFRACEFLIRFHE+QR DKIIVFADNLFAL EYA
Sbjct: 481  TKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYA 540

Query: 1749 KKLKKPMIYGATSHVERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAGS 1928
             KL+KPMIYGATSH+ERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAGS
Sbjct: 541  MKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAGS 600

Query: 1929 RRQEAQRLGRILRAKGRLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYS 2108
            RRQEAQRLGRILRAKG+ QDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYS
Sbjct: 601  RRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYS 660

Query: 2109 FKVITGLPPPDAGPELSYYSLDDQNKLLTKVLTAGDDQVGLEILDEDTDDVALQKARRXX 2288
            FKVIT LPP DAG ELSY+ LDDQ  LL KVL AGDD VGLE L++D D +AL  ARR  
Sbjct: 661  FKVITSLPPADAGAELSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDAARRSK 720

Query: 2289 XXXXXXXXANGKIYMEYNMGR---NKGHMRSKPKDPTKRHQLFKKRF 2420
                    ANG +YMEY+ GR    +G ++SKPKDP KRH LFKKRF
Sbjct: 721  GSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRF 767


>ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis]
            gi|223549734|gb|EEF51222.1| rad25/xp-B DNA repair
            helicase, putative [Ricinus communis]
          Length = 768

 Score = 1214 bits (3140), Expect = 0.0
 Identities = 619/767 (80%), Positives = 651/767 (84%), Gaps = 12/767 (1%)
 Frame = +3

Query: 156  MGHGEKGRPSKRXXXXXXXXXXXXXXXXXXXXX-----DINQDGENKR-DFTKLELKPDH 317
            MGHGEKGRPSK+                          D   DGE K+ DF+KLELK DH
Sbjct: 1    MGHGEKGRPSKKQKSSNDDHRSTIMEDEDVYCGEDMEDDRPDDGEGKKKDFSKLELKLDH 60

Query: 318  ANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL 497
            ANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL
Sbjct: 61   ANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL 120

Query: 498  ETETVISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKKLLKD 677
            ETET+ISVLNKLSKTKLPKEMIDFIH STANYGKVKLVLKKNRY VESPFPEVLK+LLKD
Sbjct: 121  ETETIISVLNKLSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYLVESPFPEVLKRLLKD 180

Query: 678  EVISRSRISSEG--NDGFTVSKSLGEIEGRHXXXXXXXXXXXXXXXXXXHSFEVDPAQVE 851
            EVISR+R+ SE   N  FT+SK+ GEI   H                  HSFEVDP+QVE
Sbjct: 181  EVISRARLVSEAHVNGSFTISKTAGEIGTSHDGLLNEAELAAAAEEKETHSFEVDPSQVE 240

Query: 852  NVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSG 1031
            NVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKP AQPRPYQEKSLSKMFGNGRARSG
Sbjct: 241  NVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSG 300

Query: 1032 IIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDS 1211
            IIVLPCGAGKSLVGVSAA RIKKSCLCLATNAVSVDQWAFQF+LWSTIR++QICRFTSDS
Sbjct: 301  IIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFQLWSTIREEQICRFTSDS 360

Query: 1212 KERFRGNAGVVVTTYNMVAFGGXXXXXXXXXXXXXXXXXWGLLLMDEVHVVPAHMFRKVI 1391
            KERF+GNAGVVVTTYNMVAFGG                 WGLLLMDEVHVVPAHMFRKVI
Sbjct: 361  KERFQGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVI 420

Query: 1392 SITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMT 1571
            S+TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMT
Sbjct: 421  SLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMT 480

Query: 1572 KEFFAEYLRKENSKKKQALYVMNPNKFRACEFLIRFHEEQRRDKIIVFADNLFALIEYAK 1751
            KEFFAEYL+KENSKKKQALYVMNPNKFRACEFLIRFHE+QR DKIIVFADNLFAL EYA 
Sbjct: 481  KEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAM 540

Query: 1752 KLKKPMIYGATSHVERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSR 1931
            KL+KPMIYGATSH ERTKIL+AFKTS+DVNTVFLSKVGDNSIDIPEANVIIQISSHAGSR
Sbjct: 541  KLRKPMIYGATSHAERTKILQAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSR 600

Query: 1932 RQEAQRLGRILRAKGRLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSF 2111
            RQEAQRLGRILRAKG+ QDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSF
Sbjct: 601  RQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSF 660

Query: 2112 KVITGLPPPDAGPELSYYSLDDQNKLLTKVLTAGDDQVGLEILDEDTDDVALQKARRXXX 2291
            KVIT LPP D+GP+LSYY LD+Q  LL KVL AGDD VGLE L+ED DD+AL KARR   
Sbjct: 661  KVITSLPPLDSGPDLSYYHLDEQLALLAKVLNAGDDAVGLEQLEEDADDIALHKARRSMG 720

Query: 2292 XXXXXXXANGKIYMEYNMGRNK----GHMRSKPKDPTKRHQLFKKRF 2420
                   A G +YMEY+ GRNK    GH++SKPKDP KRH LFK+R+
Sbjct: 721  SMSAMSGAKGMVYMEYSTGRNKLAGQGHIKSKPKDPAKRHYLFKRRY 767